RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 NISCHQ9Y2I1 1504 aa12.67□□□□□ -0.38
RDX-213ENST00000532461 CCDC180Q9P1Z9 1646 aa11.06□□□□□ -0.64
RDX-213ENST00000532461 ZCCHC6Q5VYS8 1495 aaKnown RBP10.76□□□□□ -0.69
RDX-213ENST00000532461 DCAF1Q9Y4B6 1507 aa10.63□□□□□ -0.71
RDX-213ENST00000532461 AEBP2Q6ZN18 517 aaPredicted RBP10.58□□□□□ -0.72
RDX-213ENST00000532461 MYO15BQ96JP2 1530 aa10.4□□□□□ -0.74
RDX-213ENST00000532461 CHIC1Q5VXU3 224 aa10.22□□□□□ -0.77
RDX-213ENST00000532461 SHROOM4Q9ULL8 1493 aa10.22□□□□□ -0.77
RDX-213ENST00000532461 ABCC9O60706 1549 aa10.17□□□□□ -0.78
RDX-213ENST00000532461 NACADO15069 1562 aa10.11□□□□□ -0.79
RDX-213ENST00000532461 SCRIBQ14160 1630 aa9.98□□□□□ -0.81
RDX-213ENST00000532461 SUPT5HO00267 1087 aaKnown RBP9.96□□□□□ -0.82
RDX-213ENST00000532461 RB1CC1Q8TDY2 1594 aa9.91□□□□□ -0.82
RDX-213ENST00000532461 RSF1Q96T23 1441 aaPredicted RBP9.9□□□□□ -0.82
RDX-213ENST00000532461 UNC13AQ9UPW8 1703 aa9.87□□□□□ -0.83
RDX-213ENST00000532461 DCAF8L2P0C7V8 631 aa9.85□□□□□ -0.83
RDX-213ENST00000532461 BAZ1AQ9NRL2 1556 aaPredicted RBP9.8□□□□□ -0.84
RDX-213ENST00000532461 EIF4G1Q04637 1599 aaKnown RBP9.8□□□□□ -0.84
RDX-213ENST00000532461 MROH2BQ7Z745 1585 aa9.76□□□□□ -0.85
RDX-213ENST00000532461 WIZO95785 1651 aa9.73□□□□□ -0.85
RDX-213ENST00000532461 CECR2Q9BXF3 1484 aa9.72□□□□□ -0.85
RDX-213ENST00000532461 SMARCA4P51532 1647 aa9.7□□□□□ -0.86
RDX-213ENST00000532461 PEG3Q9GZU2 1588 aa9.68□□□□□ -0.86
RDX-213ENST00000532461 TOP2AP11388 1531 aaKnown RBP9.67□□□□□ -0.86
RDX-213ENST00000532461 BICRAQ9NZM4 1560 aa9.66□□□□□ -0.86
RDX-213ENST00000532461 SMARCA2P51531 1590 aa9.59□□□□□ -0.87
RDX-213ENST00000532461 CCDC88BA6NC98 1476 aa9.5□□□□□ -0.89
RDX-213ENST00000532461 HRCP23327 699 aa9.46□□□□□ -0.89
RDX-213ENST00000532461 TRIM41Q8WV44 630 aa9.42□□□□□ -0.9
RDX-213ENST00000532461 LOC105371045A0A1W2PR82 267 aa9.42□□□□□ -0.9
RDX-213ENST00000532461 EEA1Q15075 1411 aa9.39□□□□□ -0.91
RDX-213ENST00000532461 ATAD2BQ9ULI0 1458 aa9.38□□□□□ -0.91
RDX-213ENST00000532461 HMGXB3Q12766 1538 aa9.37□□□□□ -0.91
RDX-213ENST00000532461 ABCC8Q09428 1581 aa9.37□□□□□ -0.91
RDX-213ENST00000532461 SENP3Q9H4L4 574 aaPredicted RBP9.37□□□□□ -0.91
RDX-213ENST00000532461 PRDM2Q13029 1718 aa9.37□□□□□ -0.91
RDX-213ENST00000532461 TRIM26Q12899 539 aaPredicted RBP9.36□□□□□ -0.91
RDX-213ENST00000532461 WRNQ14191 1432 aaPredicted RBP eCLIP9.35□□□□□ -0.91
RDX-213ENST00000532461 BIVM-ERCC5R4GMW8 1640 aa9.35□□□□□ -0.91
RDX-213ENST00000532461 KIF21BO75037 1637 aa9.34□□□□□ -0.91
RDX-213ENST00000532461 SYNJ1O43426 1573 aa9.31□□□□□ -0.92
RDX-213ENST00000532461 PCGF6Q9BYE7 350 aa9.3□□□□□ -0.92
RDX-213ENST00000532461 TOP2BQ02880 1626 aa9.3□□□□□ -0.92
RDX-213ENST00000532461 BAZ1BQ9UIG0 1483 aaKnown RBP9.29□□□□□ -0.92
RDX-213ENST00000532461 NCAPD3P42695 1498 aa9.28□□□□□ -0.92
RDX-213ENST00000532461 TNIKQ9UKE5 1360 aa9.26□□□□□ -0.93
RDX-213ENST00000532461 SOGA1O94964 1423 aa9.22□□□□□ -0.93
RDX-213ENST00000532461 GOLGA3Q08378 1498 aa9.22□□□□□ -0.93
RDX-213ENST00000532461 ERICH3Q5RHP9 1530 aa9.2□□□□□ -0.94
RDX-213ENST00000532461 CEP164Q9UPV0 1460 aa9.19□□□□□ -0.94
RDX-213ENST00000532461 CEP162Q5TB80 1403 aa9.19□□□□□ -0.94
RDX-213ENST00000532461 RUSC2Q8N2Y8 1516 aa9.19□□□□□ -0.94
RDX-213ENST00000532461 ZEB1P37275 1124 aaPredicted RBP9.18□□□□□ -0.94
RDX-213ENST00000532461 PABPN1Q86U42 306 aaKnown RBP eCLIP9.18□□□□□ -0.94
RDX-213ENST00000532461 CFTRP13569 1480 aa9.17□□□□□ -0.94
RDX-213ENST00000532461 CSRNP3Q8WYN3 585 aa9.14□□□□□ -0.95
RDX-213ENST00000532461 CUX1P39880 1505 aa9.12□□□□□ -0.95
RDX-213ENST00000532461 FAM9AQ8IZU1 332 aaPredicted RBP9.11□□□□□ -0.95
RDX-213ENST00000532461 PRXQ9BXM0 1461 aa9.11□□□□□ -0.95
RDX-213ENST00000532461 VPS8Q8N3P4 1428 aa9.06□□□□□ -0.96
RDX-213ENST00000532461 RAPGEF2Q9Y4G8 1499 aa9.06□□□□□ -0.96
RDX-213ENST00000532461 PPARGC1BQ86YN6 1023 aaKnown RBP9.04□□□□□ -0.96
RDX-213ENST00000532461 PHF23Q9BUL5 403 aaPredicted RBP9.03□□□□□ -0.96
RDX-213ENST00000532461 CC2D2AQ9P2K1 1620 aa9.03□□□□□ -0.96
RDX-213ENST00000532461 CLIP1P30622 1438 aa9.02□□□□□ -0.97
RDX-213ENST00000532461 WDR97A6NE52 1622 aa9.01□□□□□ -0.97
RDX-213ENST00000532461 MAP3K1Q13233 1512 aa9□□□□□ -0.97
RDX-213ENST00000532461 ARAP1Q96P48 1450 aa9□□□□□ -0.97
RDX-213ENST00000532461 KIF27Q86VH2 1401 aa8.99□□□□□ -0.97
RDX-213ENST00000532461 CADPSQ9ULU8 1353 aa8.98□□□□□ -0.97
RDX-213ENST00000532461 DNMBPQ6XZF7 1577 aa8.97□□□□□ -0.97
RDX-213ENST00000532461 CUL7Q14999 1698 aa8.95□□□□□ -0.98
RDX-213ENST00000532461 LAMC3Q9Y6N6 1575 aa8.95□□□□□ -0.98
RDX-213ENST00000532461 CUX2O14529 1486 aa8.94□□□□□ -0.98
RDX-213ENST00000532461 CFAP43Q8NDM7 1665 aa8.93□□□□□ -0.98
RDX-213ENST00000532461 CTTNBP2Q8WZ74 1663 aa8.93□□□□□ -0.98
RDX-213ENST00000532461 ABCA10Q8WWZ4 1543 aa8.92□□□□□ -0.98
RDX-213ENST00000532461 FGD5Q6ZNL6 1462 aa8.91□□□□□ -0.98
RDX-213ENST00000532461 ARHGAP35Q9NRY4 1499 aa8.91□□□□□ -0.98
RDX-213ENST00000532461 UBTFP17480 764 aaKnown RBP8.9□□□□□ -0.98
RDX-213ENST00000532461 RRBP1Q9P2E9 1410 aaKnown RBP8.9□□□□□ -0.98
RDX-213ENST00000532461 ABCA5Q8WWZ7 1642 aa8.89□□□□□ -0.99
RDX-213ENST00000532461 IGF1RP08069 1367 aa8.89□□□□□ -0.99
RDX-213ENST00000532461 FANCD2Q9BXW9 1451 aa8.88□□□□□ -0.99
RDX-213ENST00000532461 EFCAB5A4FU69 1503 aa8.88□□□□□ -0.99
RDX-213ENST00000532461 KIF21AQ7Z4S6 1674 aa8.88□□□□□ -0.99
RDX-213ENST00000532461 TIAM1Q13009 1591 aa8.87□□□□□ -0.99
RDX-213ENST00000532461 TOPBP1Q92547 1522 aa8.87□□□□□ -0.99
RDX-213ENST00000532461 AQRO60306 1485 aaKnown RBP eCLIP8.86□□□□□ -0.99
RDX-213ENST00000532461 EHMT2Q96KQ7 1210 aa8.85□□□□□ -0.99
RDX-213ENST00000532461 CLSPNQ9HAW4 1339 aa8.84□□□□□ -0.99
RDX-213ENST00000532461 SAMD9Q5K651 1589 aa8.84□□□□□ -0.99
RDX-213ENST00000532461 POLA1P09884 1462 aaPredicted RBP8.84□□□□□ -0.99
RDX-213ENST00000532461 TARBP1Q13395 1621 aaKnown RBP8.82□□□□□ -1
RDX-213ENST00000532461 THOC2Q8NI27 1593 aaKnown RBP8.81□□□□□ -1
RDX-213ENST00000532461 URB2Q14146 1524 aaKnown RBP8.8□□□□□ -1
RDX-213ENST00000532461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.8□□□□□ -1
RDX-213ENST00000532461 CARMIL1Q5VZK9 1371 aa8.8□□□□□ -1
RDX-213ENST00000532461 LRRIQ1Q96JM4 1722 aa8.8□□□□□ -1
RDX-213ENST00000532461 FYCO1Q9BQS8 1478 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms