RNA–Protein interactions for RNA: ENST00000453643.5

PACSIN2-210, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

TSL 5

Gene PACSIN2, Length 818 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-210ENST00000453643 NISCHQ9Y2I1 1504 aa39.87■■■■□ 3.97
PACSIN2-210ENST00000453643 CCDC180Q9P1Z9 1646 aa35.65■■■■□ 3.3
PACSIN2-210ENST00000453643 ABCC9O60706 1549 aa35.56■■■■□ 3.28
PACSIN2-210ENST00000453643 RB1CC1Q8TDY2 1594 aa33.85■■■■□ 3.01
PACSIN2-210ENST00000453643 NACADO15069 1562 aa33.66■■■□□ 2.98
PACSIN2-210ENST00000453643 DCAF8L2P0C7V8 631 aa33.57■■■□□ 2.96
PACSIN2-210ENST00000453643 MYO15BQ96JP2 1530 aa33.25■■■□□ 2.91
PACSIN2-210ENST00000453643 DNAJC5BQ9UF47 199 aa33.21■■■□□ 2.91
PACSIN2-210ENST00000453643 PABPN1Q86U42 306 aaKnown RBP eCLIP33.14■■■□□ 2.9
PACSIN2-210ENST00000453643 ZCCHC6Q5VYS8 1495 aaKnown RBP33.12■■■□□ 2.89
PACSIN2-210ENST00000453643 UNC13AQ9UPW8 1703 aa33.1■■■□□ 2.89
PACSIN2-210ENST00000453643 BICRAQ9NZM4 1560 aa32.92■■■□□ 2.86
PACSIN2-210ENST00000453643 DCAF1Q9Y4B6 1507 aa32.9■■■□□ 2.86
PACSIN2-210ENST00000453643 SCRIBQ14160 1630 aa32.59■■■□□ 2.81
PACSIN2-210ENST00000453643 SHROOM4Q9ULL8 1493 aa32.41■■■□□ 2.78
PACSIN2-210ENST00000453643 CC2D2AQ9P2K1 1620 aa32.1■■■□□ 2.73
PACSIN2-210ENST00000453643 EIF4G1Q04637 1599 aaKnown RBP32.08■■■□□ 2.73
PACSIN2-210ENST00000453643 CECR2Q9BXF3 1484 aa31.98■■■□□ 2.71
PACSIN2-210ENST00000453643 NCAPD3P42695 1498 aa31.09■■■□□ 2.57
PACSIN2-210ENST00000453643 SMARCA4P51532 1647 aa31.07■■■□□ 2.56
PACSIN2-210ENST00000453643 ATAD2BQ9ULI0 1458 aa31.06■■■□□ 2.56
PACSIN2-210ENST00000453643 SMARCA2P51531 1590 aa30.93■■■□□ 2.54
PACSIN2-210ENST00000453643 BAZ1AQ9NRL2 1556 aaPredicted RBP30.92■■■□□ 2.54
PACSIN2-210ENST00000453643 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
PACSIN2-210ENST00000453643 MROH2BQ7Z745 1585 aa30.77■■■□□ 2.52
PACSIN2-210ENST00000453643 BAZ1BQ9UIG0 1483 aaKnown RBP30.76■■■□□ 2.51
PACSIN2-210ENST00000453643 PEG3Q9GZU2 1588 aa30.75■■■□□ 2.51
PACSIN2-210ENST00000453643 ERCC6Q03468 1493 aa30.64■■■□□ 2.5
PACSIN2-210ENST00000453643 NESP48681 1621 aa30.62■■■□□ 2.49
PACSIN2-210ENST00000453643 CUX2O14529 1486 aa30.5■■■□□ 2.47
PACSIN2-210ENST00000453643 WIZO95785 1651 aa30.39■■■□□ 2.45
PACSIN2-210ENST00000453643 LAMC3Q9Y6N6 1575 aa30.34■■■□□ 2.45
PACSIN2-210ENST00000453643 DNAJC5Q9H3Z4 198 aa30.26■■■□□ 2.43
PACSIN2-210ENST00000453643 THOC2Q8NI27 1593 aaKnown RBP30.24■■■□□ 2.43
PACSIN2-210ENST00000453643 RSF1Q96T23 1441 aaPredicted RBP30.19■■■□□ 2.42
PACSIN2-210ENST00000453643 KIF21AQ7Z4S6 1674 aa30.17■■■□□ 2.42
PACSIN2-210ENST00000453643 CADPSQ9ULU8 1353 aa30.16■■■□□ 2.42
PACSIN2-210ENST00000453643 PDS5BQ9NTI5 1447 aa30.16■■■□□ 2.42
PACSIN2-210ENST00000453643 TOP2AP11388 1531 aaKnown RBP30.01■■■□□ 2.39
PACSIN2-210ENST00000453643 MRC2Q9UBG0 1479 aa29.93■■■□□ 2.38
PACSIN2-210ENST00000453643 CFTRP13569 1480 aa29.87■■■□□ 2.37
PACSIN2-210ENST00000453643 WDR62O43379 1518 aa29.86■■■□□ 2.37
PACSIN2-210ENST00000453643 FANCD2Q9BXW9 1451 aa29.85■■■□□ 2.37
PACSIN2-210ENST00000453643 CEP164Q9UPV0 1460 aa29.85■■■□□ 2.37
PACSIN2-210ENST00000453643 CCDC88BA6NC98 1476 aa29.68■■■□□ 2.34
PACSIN2-210ENST00000453643 URB2Q14146 1524 aaKnown RBP29.61■■■□□ 2.33
PACSIN2-210ENST00000453643 PRDM2Q13029 1718 aa29.52■■■□□ 2.32
PACSIN2-210ENST00000453643 TOPBP1Q92547 1522 aa29.3■■■□□ 2.28
PACSIN2-210ENST00000453643 ZNF608Q9ULD9 1512 aaPredicted RBP29.24■■■□□ 2.27
PACSIN2-210ENST00000453643 IFT140Q96RY7 1462 aa29.23■■■□□ 2.27
PACSIN2-210ENST00000453643 DNMBPQ6XZF7 1577 aa29.19■■■□□ 2.26
PACSIN2-210ENST00000453643 ABCC8Q09428 1581 aa29.16■■■□□ 2.26
PACSIN2-210ENST00000453643 OSCARQ8IYS5 282 aa29.11■■■□□ 2.25
PACSIN2-210ENST00000453643 TRIM41Q8WV44 630 aa29.07■■■□□ 2.24
PACSIN2-210ENST00000453643 EIF4G3O43432 1585 aaKnown RBP29.05■■■□□ 2.24
PACSIN2-210ENST00000453643 POLA1P09884 1462 aaPredicted RBP29.03■■■□□ 2.24
PACSIN2-210ENST00000453643 TARBP1Q13395 1621 aaKnown RBP29.02■■■□□ 2.24
PACSIN2-210ENST00000453643 SUPT5HO00267 1087 aaKnown RBP29■■■□□ 2.23
PACSIN2-210ENST00000453643 AQRO60306 1485 aaKnown RBP eCLIP28.97■■■□□ 2.234e-10■■■■□ 21.8
PACSIN2-210ENST00000453643 RAD54L2Q9Y4B4 1467 aa28.94■■■□□ 2.22
PACSIN2-210ENST00000453643 CUX1P39880 1505 aa28.89■■■□□ 2.22
PACSIN2-210ENST00000453643 FGD5Q6ZNL6 1462 aa28.88■■■□□ 2.21
PACSIN2-210ENST00000453643 SOGA1O94964 1423 aa28.87■■■□□ 2.21
PACSIN2-210ENST00000453643 TDRD9Q8NDG6 1382 aaKnown RBP28.82■■■□□ 2.2
PACSIN2-210ENST00000453643 RIMBP3CA6NJZ7 1639 aa28.77■■■□□ 2.2
PACSIN2-210ENST00000453643 RIMBP3BA6NNM3 1639 aa28.77■■■□□ 2.2
PACSIN2-210ENST00000453643 RIMBP3Q9UFD9 1639 aa28.77■■■□□ 2.2
PACSIN2-210ENST00000453643 CHD1O14646 1710 aa28.77■■■□□ 2.2
PACSIN2-210ENST00000453643 ARHGEF11O15085 1522 aa28.71■■■□□ 2.19
PACSIN2-210ENST00000453643 FBLN2P98095 1184 aa28.71■■■□□ 2.19
PACSIN2-210ENST00000453643 SNAPC4Q5SXM2 1469 aa28.68■■■□□ 2.18
PACSIN2-210ENST00000453643 WDR97A6NE52 1622 aa28.66■■■□□ 2.18
PACSIN2-210ENST00000453643 GRIN2BQ13224 1484 aa28.59■■■□□ 2.17
PACSIN2-210ENST00000453643 MAGI1Q96QZ7 1491 aaPredicted RBP28.57■■■□□ 2.16
PACSIN2-210ENST00000453643 ABCA10Q8WWZ4 1543 aa28.53■■■□□ 2.16
PACSIN2-210ENST00000453643 GAPVD1Q14C86 1478 aa28.53■■■□□ 2.16
PACSIN2-210ENST00000453643 CHMP7Q8WUX9 453 aaPredicted RBP28.5■■■□□ 2.15
PACSIN2-210ENST00000453643 ABCA5Q8WWZ7 1642 aa28.49■■■□□ 2.15
PACSIN2-210ENST00000453643 PBRM1Q86U86 1689 aa28.48■■■□□ 2.15
PACSIN2-210ENST00000453643 SYNJ2O15056 1496 aa28.48■■■□□ 2.15
PACSIN2-210ENST00000453643 CLASP1Q7Z460 1538 aa28.48■■■□□ 2.15
PACSIN2-210ENST00000453643 CYB5RLQ6IPT4 315 aa28.47■■■□□ 2.15
PACSIN2-210ENST00000453643 ARAP1Q96P48 1450 aa28.46■■■□□ 2.15
PACSIN2-210ENST00000453643 SYNJ1O43426 1573 aa28.46■■■□□ 2.15
PACSIN2-210ENST00000453643 WRNQ14191 1432 aaPredicted RBP eCLIP28.46■■■□□ 2.15
PACSIN2-210ENST00000453643 TOP2BQ02880 1626 aa28.44■■■□□ 2.14
PACSIN2-210ENST00000453643 BIVM-ERCC5R4GMW8 1640 aa28.43■■■□□ 2.14
PACSIN2-210ENST00000453643 ADAMTS12P58397 1594 aa28.27■■■□□ 2.12
PACSIN2-210ENST00000453643 GRIN2AQ12879 1464 aa28.25■■■□□ 2.11
PACSIN2-210ENST00000453643 FHAD1B1AJZ9 1412 aa28.17■■■□□ 2.1
PACSIN2-210ENST00000453643 CEP170Q5SW79 1584 aa28.16■■■□□ 2.1
PACSIN2-210ENST00000453643 ERICH3Q5RHP9 1530 aa28.16■■■□□ 2.1
PACSIN2-210ENST00000453643 NUP160Q12769 1436 aa28.15■■■□□ 2.1
PACSIN2-210ENST00000453643 ERCC6L2Q5T890 1561 aa28.1■■■□□ 2.09
PACSIN2-210ENST00000453643 TRHP20396 242 aaPredicted RBP28.07■■■□□ 2.08
PACSIN2-210ENST00000453643 SHROOM2Q13796 1616 aa27.98■■■□□ 2.07
PACSIN2-210ENST00000453643 KIF27Q86VH2 1401 aa27.88■■■□□ 2.05
PACSIN2-210ENST00000453643 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
PACSIN2-210ENST00000453643 IGF1RP08069 1367 aa27.87■■■□□ 2.05
PACSIN2-210ENST00000453643 PRG4Q92954 1404 aaPredicted RBP27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms