RNA–Protein interactions for RNA: ENST00000380880.3

FREM1-202, Transcript of FRAS1 related extracellular matrix 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FREM1, Length 7,324 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-202ENST00000380880 DCAF8L2P0C7V8 631 aa16.09■□□□□ 0.17
FREM1-202ENST00000380880 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
FREM1-202ENST00000380880 FAM9AQ8IZU1 332 aaPredicted RBP15.03■□□□□ -0
FREM1-202ENST00000380880 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
FREM1-202ENST00000380880 APLP2Q06481 763 aa14.79□□□□□ -0.04
FREM1-202ENST00000380880 SUPT5HO00267 1087 aaKnown RBP14.7□□□□□ -0.06
FREM1-202ENST00000380880 ERICH6Q7L0X2 663 aa14.68□□□□□ -0.06
FREM1-202ENST00000380880 CCER1Q8TC90 406 aaPredicted RBP14.54□□□□□ -0.08
FREM1-202ENST00000380880 ATP1B4Q9UN42 357 aaPredicted RBP14.37□□□□□ -0.11
FREM1-202ENST00000380880 TTBK1Q5TCY1 1321 aaPredicted RBP14.31□□□□□ -0.12
FREM1-202ENST00000380880 SHROOM4Q9ULL8 1493 aa14.24□□□□□ -0.13
FREM1-202ENST00000380880 RANGAP1P46060 587 aaPredicted RBP14.24□□□□□ -0.13
FREM1-202ENST00000380880 MYT1LQ9UL68 1186 aa14.21□□□□□ -0.14
FREM1-202ENST00000380880 NEFLP07196 543 aa14.09□□□□□ -0.15
FREM1-202ENST00000380880 DAXXQ9UER7 740 aaPredicted RBP14.07□□□□□ -0.16
FREM1-202ENST00000380880 MYT1Q01538 1121 aa14.02□□□□□ -0.17
FREM1-202ENST00000380880 CENPBP07199 599 aaPredicted RBP14.01□□□□□ -0.17
FREM1-202ENST00000380880 PCGF6Q9BYE7 350 aa13.99□□□□□ -0.17
FREM1-202ENST00000380880 CHIC1Q5VXU3 224 aa13.97□□□□□ -0.17
FREM1-202ENST00000380880 SLC4A1APQ9BWU0 796 aaKnown RBP13.9□□□□□ -0.18
FREM1-202ENST00000380880 POLR3GLQ9BT43 218 aa13.87□□□□□ -0.19
FREM1-202ENST00000380880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
FREM1-202ENST00000380880 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
FREM1-202ENST00000380880 YTHDC1Q96MU7 727 aaKnown RBP13.81□□□□□ -0.2
FREM1-202ENST00000380880 UBTFP17480 764 aaKnown RBP13.78□□□□□ -0.2
FREM1-202ENST00000380880 ZEB1P37275 1124 aaPredicted RBP13.66□□□□□ -0.22
FREM1-202ENST00000380880 CNGB1Q14028 1251 aaPredicted RBP13.65□□□□□ -0.22
FREM1-202ENST00000380880 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
FREM1-202ENST00000380880 ZNF316A6NFI3 1004 aaPredicted RBP13.64□□□□□ -0.23
FREM1-202ENST00000380880 TRIM41Q8WV44 630 aa13.59□□□□□ -0.23
FREM1-202ENST00000380880 SLC24A1O60721 1099 aa13.59□□□□□ -0.23
FREM1-202ENST00000380880 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
FREM1-202ENST00000380880 NISCHQ9Y2I1 1504 aa13.53□□□□□ -0.24
FREM1-202ENST00000380880 ITGAEP38570 1179 aa13.5□□□□□ -0.25
FREM1-202ENST00000380880 BCANQ96GW7 911 aa13.43□□□□□ -0.26
FREM1-202ENST00000380880 RTL5Q5HYW3 569 aaPredicted RBP13.41□□□□□ -0.26
FREM1-202ENST00000380880 BCL11AQ9H165 835 aa13.37□□□□□ -0.27
FREM1-202ENST00000380880 PPARGC1BQ86YN6 1023 aaKnown RBP13.31□□□□□ -0.28
FREM1-202ENST00000380880 NEFMP07197 916 aa13.27□□□□□ -0.28
FREM1-202ENST00000380880 CANXP27824 592 aaKnown RBP13.2□□□□□ -0.3
FREM1-202ENST00000380880 TRIM52Q96A61 297 aa13.16□□□□□ -0.3
FREM1-202ENST00000380880 ESF1Q9H501 851 aaKnown RBP13.15□□□□□ -0.3
FREM1-202ENST00000380880 PLPPR3Q6T4P5 718 aa13.14□□□□□ -0.31
FREM1-202ENST00000380880 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
FREM1-202ENST00000380880 CDK11AQ9UQ88 783 aaPredicted RBP13.11□□□□□ -0.31
FREM1-202ENST00000380880 FAM50AQ14320 339 aaKnown RBP13.07□□□□□ -0.32
FREM1-202ENST00000380880 ZNF326Q5BKZ1 582 aaKnown RBP13.07□□□□□ -0.32
FREM1-202ENST00000380880 A0A0G2JS52 829 aa13.04□□□□□ -0.32
FREM1-202ENST00000380880 FBLN2P98095 1184 aa13.04□□□□□ -0.32
FREM1-202ENST00000380880 SCAF1Q9H7N4 1312 aaKnown RBP13□□□□□ -0.33
FREM1-202ENST00000380880 STAG3Q9UJ98 1225 aa13□□□□□ -0.33
FREM1-202ENST00000380880 ANP32BQ92688 251 aaKnown RBP12.99□□□□□ -0.33
FREM1-202ENST00000380880 NEUROD1Q13562 356 aa12.94□□□□□ -0.34
FREM1-202ENST00000380880 HSP90AA1P07900 732 aaKnown RBP12.93□□□□□ -0.34
FREM1-202ENST00000380880 TRIM26Q12899 539 aaPredicted RBP12.9□□□□□ -0.34
FREM1-202ENST00000380880 NPM2Q86SE8 214 aaKnown RBP12.9□□□□□ -0.34
FREM1-202ENST00000380880 ANP32CO43423 234 aa12.84□□□□□ -0.35
FREM1-202ENST00000380880 TULP1O00294 542 aaPredicted RBP12.84□□□□□ -0.35
FREM1-202ENST00000380880 CHGAP10645 457 aaKnown RBP12.84□□□□□ -0.35
FREM1-202ENST00000380880 NPM1P06748 294 aaKnown RBP eCLIP12.76□□□□□ -0.37
FREM1-202ENST00000380880 ZBTB7CA1YPR0 619 aa12.76□□□□□ -0.37
FREM1-202ENST00000380880 UPF2Q9HAU5 1272 aaKnown RBP12.76□□□□□ -0.37
FREM1-202ENST00000380880 ANP32AP39687 249 aaKnown RBP12.75□□□□□ -0.37
FREM1-202ENST00000380880 HRCP23327 699 aa12.75□□□□□ -0.37
FREM1-202ENST00000380880 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
FREM1-202ENST00000380880 PLEKHG5O94827 1062 aa12.73□□□□□ -0.37
FREM1-202ENST00000380880 HAP1P54257 671 aaPredicted RBP12.73□□□□□ -0.37
FREM1-202ENST00000380880 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
FREM1-202ENST00000380880 ARID3CA6NKF2 412 aa12.7□□□□□ -0.38
FREM1-202ENST00000380880 C14orf37Q86TY3 774 aa12.69□□□□□ -0.38
FREM1-202ENST00000380880 NPHP1O15259 732 aa12.68□□□□□ -0.38
FREM1-202ENST00000380880 DIEXFQ68CQ4 756 aaKnown RBP12.67□□□□□ -0.38
FREM1-202ENST00000380880 EIF5BO60841 1220 aaKnown RBP12.67□□□□□ -0.38
FREM1-202ENST00000380880 ARXQ96QS3 562 aa12.67□□□□□ -0.38
FREM1-202ENST00000380880 MYH16Q9H6N6 1097 aa12.6□□□□□ -0.39
FREM1-202ENST00000380880 GLIPR1L2Q4G1C9 344 aa12.6□□□□□ -0.39
FREM1-202ENST00000380880 ZRSR1Q15695 479 aaKnown RBP12.56□□□□□ -0.4
FREM1-202ENST00000380880 CLSTN1O94985 981 aa12.55□□□□□ -0.4
FREM1-202ENST00000380880 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.54□□□□□ -0.4
FREM1-202ENST00000380880 NCLP19338 710 aaKnown RBP12.53□□□□□ -0.4
FREM1-202ENST00000380880 P3H3Q8IVL6 736 aa12.52□□□□□ -0.41
FREM1-202ENST00000380880 LOC105371045A0A1W2PR82 267 aa12.51□□□□□ -0.41
FREM1-202ENST00000380880 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.417e-8■□□□□ 11.1
FREM1-202ENST00000380880 PPP1R15AO75807 674 aaPredicted RBP12.49□□□□□ -0.41
FREM1-202ENST00000380880 PRM3Q9NNZ6 103 aa12.49□□□□□ -0.41
FREM1-202ENST00000380880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.418e-9■■□□□ 12.1
FREM1-202ENST00000380880 SALL2Q9Y467 1007 aaPredicted RBP12.48□□□□□ -0.41
FREM1-202ENST00000380880 WDR43Q15061 677 aaKnown RBP eCLIP12.48□□□□□ -0.41
FREM1-202ENST00000380880 ARID4BQ4LE39 1312 aaPredicted RBP12.46□□□□□ -0.41
FREM1-202ENST00000380880 SENP3Q9H4L4 574 aaPredicted RBP12.46□□□□□ -0.41
FREM1-202ENST00000380880 TRIM44Q96DX7 344 aaPredicted RBP12.45□□□□□ -0.42
FREM1-202ENST00000380880 TAOK2Q9UL54 1235 aa12.45□□□□□ -0.42
FREM1-202ENST00000380880 GOLGA2Q08379 1002 aa12.44□□□□□ -0.42
FREM1-202ENST00000380880 KRI1Q8N9T8 703 aaKnown RBP12.44□□□□□ -0.42
FREM1-202ENST00000380880 LMOD2Q6P5Q4 547 aa12.39□□□□□ -0.43
FREM1-202ENST00000380880 TPRNQ4KMQ1 711 aa12.39□□□□□ -0.43
FREM1-202ENST00000380880 ISY1Q9ULR0 285 aaKnown RBP12.39□□□□□ -0.43
FREM1-202ENST00000380880 CASC1Q6TDU7 716 aa12.37□□□□□ -0.43
FREM1-202ENST00000380880 TNNT2P45379 298 aaPredicted RBP12.35□□□□□ -0.43
FREM1-202ENST00000380880 TMC1Q8TDI8 760 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms