RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 NISCHQ9Y2I1 1504 aa28■■■□□ 2.07
AGAP3-226ENST00000622464 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
AGAP3-226ENST00000622464 CCDC180Q9P1Z9 1646 aa23.83■■□□□ 1.41
AGAP3-226ENST00000622464 DCAF8L2P0C7V8 631 aa23.79■■□□□ 1.4
AGAP3-226ENST00000622464 ZCCHC6Q5VYS8 1495 aaKnown RBP23.58■■□□□ 1.37
AGAP3-226ENST00000622464 SUPT5HO00267 1087 aaKnown RBP23.3■■□□□ 1.32
AGAP3-226ENST00000622464 ABCC9O60706 1549 aa22.83■■□□□ 1.25
AGAP3-226ENST00000622464 DCAF1Q9Y4B6 1507 aa22.76■■□□□ 1.23
AGAP3-226ENST00000622464 SCRIBQ14160 1630 aa22.6■■□□□ 1.21
AGAP3-226ENST00000622464 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
AGAP3-226ENST00000622464 MYO15BQ96JP2 1530 aa22.2■■□□□ 1.14
AGAP3-226ENST00000622464 NACADO15069 1562 aa22.18■■□□□ 1.14
AGAP3-226ENST00000622464 RSF1Q96T23 1441 aaPredicted RBP22.07■■□□□ 1.12
AGAP3-226ENST00000622464 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
AGAP3-226ENST00000622464 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
AGAP3-226ENST00000622464 MROH2BQ7Z745 1585 aa21.86■■□□□ 1.09
AGAP3-226ENST00000622464 PABPN1Q86U42 306 aaKnown RBP eCLIP21.85■■□□□ 1.093e-6■■□□□ 13.3
AGAP3-226ENST00000622464 LOC105371045A0A1W2PR82 267 aa21.77■■□□□ 1.08
AGAP3-226ENST00000622464 WIZO95785 1651 aa21.73■■□□□ 1.07
AGAP3-226ENST00000622464 UNC13AQ9UPW8 1703 aa21.69■■□□□ 1.06
AGAP3-226ENST00000622464 EHMT2Q96KQ7 1210 aa21.64■■□□□ 1.06
AGAP3-226ENST00000622464 FAM9AQ8IZU1 332 aaPredicted RBP21.63■■□□□ 1.05
AGAP3-226ENST00000622464 TRIM41Q8WV44 630 aa21.59■■□□□ 1.05
AGAP3-226ENST00000622464 BAZ1AQ9NRL2 1556 aaPredicted RBP21.5■■□□□ 1.03
AGAP3-226ENST00000622464 BICRAQ9NZM4 1560 aa21.45■■□□□ 1.02
AGAP3-226ENST00000622464 SMARCA4P51532 1647 aa21.42■■□□□ 1.02
AGAP3-226ENST00000622464 PCGF6Q9BYE7 350 aa21.31■■□□□ 1
AGAP3-226ENST00000622464 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
AGAP3-226ENST00000622464 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
AGAP3-226ENST00000622464 ABCC8Q09428 1581 aa21.18■□□□□ 0.98
AGAP3-226ENST00000622464 SMARCA2P51531 1590 aa21.17■□□□□ 0.98
AGAP3-226ENST00000622464 EIF4G1Q04637 1599 aaKnown RBP21.1■□□□□ 0.97
AGAP3-226ENST00000622464 ATAD2BQ9ULI0 1458 aa21■□□□□ 0.95
AGAP3-226ENST00000622464 PPARGC1BQ86YN6 1023 aaKnown RBP20.98■□□□□ 0.95
AGAP3-226ENST00000622464 BAZ1BQ9UIG0 1483 aaKnown RBP20.95■□□□□ 0.94
AGAP3-226ENST00000622464 SOGA1O94964 1423 aa20.89■□□□□ 0.94
AGAP3-226ENST00000622464 PEG3Q9GZU2 1588 aa20.87■□□□□ 0.93
AGAP3-226ENST00000622464 RUSC2Q8N2Y8 1516 aa20.85■□□□□ 0.93
AGAP3-226ENST00000622464 HRCP23327 699 aa20.82■□□□□ 0.92
AGAP3-226ENST00000622464 TTBK1Q5TCY1 1321 aaPredicted RBP20.8■□□□□ 0.92
AGAP3-226ENST00000622464 TRIM26Q12899 539 aaPredicted RBP20.78■□□□□ 0.92
AGAP3-226ENST00000622464 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.912e-6■■■■■ 28.3
AGAP3-226ENST00000622464 SYNJ1O43426 1573 aa20.69■□□□□ 0.9
AGAP3-226ENST00000622464 UBTFP17480 764 aaKnown RBP20.68■□□□□ 0.9
AGAP3-226ENST00000622464 CSRNP3Q8WYN3 585 aa20.66■□□□□ 0.9
AGAP3-226ENST00000622464 RANGAP1P46060 587 aaPredicted RBP20.64■□□□□ 0.89
AGAP3-226ENST00000622464 NCAPD3P42695 1498 aa20.57■□□□□ 0.88
AGAP3-226ENST00000622464 CEP162Q5TB80 1403 aa20.52■□□□□ 0.88
AGAP3-226ENST00000622464 HMGXB3Q12766 1538 aa20.49■□□□□ 0.87
AGAP3-226ENST00000622464 TNIKQ9UKE5 1360 aa20.41■□□□□ 0.86
AGAP3-226ENST00000622464 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
AGAP3-226ENST00000622464 EEA1Q15075 1411 aa20.41■□□□□ 0.86
AGAP3-226ENST00000622464 GOLGA3Q08378 1498 aa20.4■□□□□ 0.86
AGAP3-226ENST00000622464 RAPGEF2Q9Y4G8 1499 aa20.36■□□□□ 0.85
AGAP3-226ENST00000622464 CUX1P39880 1505 aa20.35■□□□□ 0.85
AGAP3-226ENST00000622464 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
AGAP3-226ENST00000622464 CFTRP13569 1480 aa20.33■□□□□ 0.85
AGAP3-226ENST00000622464 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
AGAP3-226ENST00000622464 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
AGAP3-226ENST00000622464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.28■□□□□ 0.84
AGAP3-226ENST00000622464 BIVM-ERCC5R4GMW8 1640 aa20.24■□□□□ 0.83
AGAP3-226ENST00000622464 CADPSQ9ULU8 1353 aa20.24■□□□□ 0.83
AGAP3-226ENST00000622464 CLIP1P30622 1438 aa20.23■□□□□ 0.83
AGAP3-226ENST00000622464 NESP48681 1621 aa20.22■□□□□ 0.83
AGAP3-226ENST00000622464 KIF21BO75037 1637 aa20.21■□□□□ 0.83
AGAP3-226ENST00000622464 KIF27Q86VH2 1401 aa20.11■□□□□ 0.81
AGAP3-226ENST00000622464 CUX2O14529 1486 aa20.11■□□□□ 0.81
AGAP3-226ENST00000622464 CCER1Q8TC90 406 aaPredicted RBP20.1■□□□□ 0.81
AGAP3-226ENST00000622464 FANCD2Q9BXW9 1451 aa20.08■□□□□ 0.81
AGAP3-226ENST00000622464 FGD5Q6ZNL6 1462 aa20.07■□□□□ 0.8
AGAP3-226ENST00000622464 PRXQ9BXM0 1461 aa20.06■□□□□ 0.8
AGAP3-226ENST00000622464 HNRNPUL2Q1KMD3 747 aaKnown RBP20.05■□□□□ 0.8
AGAP3-226ENST00000622464 APLP2Q06481 763 aa20.03■□□□□ 0.8
AGAP3-226ENST00000622464 PRDM2Q13029 1718 aa20.02■□□□□ 0.8
AGAP3-226ENST00000622464 VPS8Q8N3P4 1428 aa20.02■□□□□ 0.79
AGAP3-226ENST00000622464 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
AGAP3-226ENST00000622464 ZEB1P37275 1124 aaPredicted RBP19.98■□□□□ 0.79
AGAP3-226ENST00000622464 IGF1RP08069 1367 aa19.97■□□□□ 0.79
AGAP3-226ENST00000622464 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
AGAP3-226ENST00000622464 ERICH3Q5RHP9 1530 aa19.93■□□□□ 0.78
AGAP3-226ENST00000622464 ARAP1Q96P48 1450 aa19.93■□□□□ 0.78
AGAP3-226ENST00000622464 KANK4Q5T7N3 995 aaPredicted RBP19.92■□□□□ 0.78
AGAP3-226ENST00000622464 CARMIL1Q5VZK9 1371 aa19.9■□□□□ 0.78
AGAP3-226ENST00000622464 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
AGAP3-226ENST00000622464 POLA1P09884 1462 aaPredicted RBP19.88■□□□□ 0.77
AGAP3-226ENST00000622464 ATP1B4Q9UN42 357 aaPredicted RBP19.84■□□□□ 0.77
AGAP3-226ENST00000622464 ARHGAP35Q9NRY4 1499 aa19.83■□□□□ 0.77
AGAP3-226ENST00000622464 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.76
AGAP3-226ENST00000622464 URB2Q14146 1524 aaKnown RBP19.83■□□□□ 0.76
AGAP3-226ENST00000622464 DNMBPQ6XZF7 1577 aa19.82■□□□□ 0.76
AGAP3-226ENST00000622464 PELP1Q8IZL8 1130 aaKnown RBP19.8■□□□□ 0.76
AGAP3-226ENST00000622464 ITGAEP38570 1179 aa19.77■□□□□ 0.76
AGAP3-226ENST00000622464 LAMC3Q9Y6N6 1575 aa19.74■□□□□ 0.75
AGAP3-226ENST00000622464 KIF21AQ7Z4S6 1674 aa19.73■□□□□ 0.75
AGAP3-226ENST00000622464 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
AGAP3-226ENST00000622464 PDS5BQ9NTI5 1447 aa19.7■□□□□ 0.74
AGAP3-226ENST00000622464 FHOD3Q2V2M9 1422 aa19.67■□□□□ 0.74
AGAP3-226ENST00000622464 GAPVD1Q14C86 1478 aa19.59■□□□□ 0.73
AGAP3-226ENST00000622464 AQRO60306 1485 aaKnown RBP eCLIP19.57■□□□□ 0.726e-7■■■■□ 22.9
AGAP3-226ENST00000622464 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms