RNA–Protein interactions for RNA: ENST00000454193.5

CCDC142-203, Transcript of coiled-coil domain containing 142, humanhuman

TSL 2

Gene CCDC142, Length 2,309 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-203ENST00000454193 NISCHQ9Y2I1 1504 aa40.59■■■■■ 4.09
CCDC142-203ENST00000454193 CCDC180Q9P1Z9 1646 aa34.61■■■■□ 3.13
CCDC142-203ENST00000454193 SHROOM4Q9ULL8 1493 aa34.41■■■■□ 3.1
CCDC142-203ENST00000454193 ZCCHC6Q5VYS8 1495 aaKnown RBP34.32■■■■□ 3.08
CCDC142-203ENST00000454193 SUPT5HO00267 1087 aaKnown RBP33.74■■■□□ 2.99
CCDC142-203ENST00000454193 DCAF8L2P0C7V8 631 aa33.59■■■□□ 2.97
CCDC142-203ENST00000454193 DCAF1Q9Y4B6 1507 aa33.38■■■□□ 2.93
CCDC142-203ENST00000454193 CHIC1Q5VXU3 224 aa32.79■■■□□ 2.84
CCDC142-203ENST00000454193 MYO15BQ96JP2 1530 aa32.57■■■□□ 2.8
CCDC142-203ENST00000454193 ABCC9O60706 1549 aa32.36■■■□□ 2.77
CCDC142-203ENST00000454193 SCRIBQ14160 1630 aa32.32■■■□□ 2.76
CCDC142-203ENST00000454193 RSF1Q96T23 1441 aaPredicted RBP32.06■■■□□ 2.72
CCDC142-203ENST00000454193 NACADO15069 1562 aa32.02■■■□□ 2.72
CCDC142-203ENST00000454193 LOC105371045A0A1W2PR82 267 aa31.76■■■□□ 2.67
CCDC142-203ENST00000454193 RB1CC1Q8TDY2 1594 aa31.73■■■□□ 2.67
CCDC142-203ENST00000454193 PCGF6Q9BYE7 350 aa31.65■■■□□ 2.66
CCDC142-203ENST00000454193 HRCP23327 699 aa31.63■■■□□ 2.65
CCDC142-203ENST00000454193 CECR2Q9BXF3 1484 aa31.59■■■□□ 2.65
CCDC142-203ENST00000454193 TRIM41Q8WV44 630 aa31.5■■■□□ 2.63
CCDC142-203ENST00000454193 MROH2BQ7Z745 1585 aa31.5■■■□□ 2.63
CCDC142-203ENST00000454193 WIZO95785 1651 aa31.32■■■□□ 2.6
CCDC142-203ENST00000454193 BAZ1AQ9NRL2 1556 aaPredicted RBP31.21■■■□□ 2.59
CCDC142-203ENST00000454193 TRIM26Q12899 539 aaPredicted RBP31.16■■■□□ 2.58
CCDC142-203ENST00000454193 FAM9AQ8IZU1 332 aaPredicted RBP31.14■■■□□ 2.58
CCDC142-203ENST00000454193 UNC13AQ9UPW8 1703 aa30.96■■■□□ 2.55
CCDC142-203ENST00000454193 SMARCA4P51532 1647 aa30.92■■■□□ 2.54
CCDC142-203ENST00000454193 TOP2AP11388 1531 aaKnown RBP30.89■■■□□ 2.54
CCDC142-203ENST00000454193 EIF4G1Q04637 1599 aaKnown RBP30.88■■■□□ 2.53
CCDC142-203ENST00000454193 PPARGC1BQ86YN6 1023 aaKnown RBP30.87■■■□□ 2.53
CCDC142-203ENST00000454193 EHMT2Q96KQ7 1210 aa30.82■■■□□ 2.52
CCDC142-203ENST00000454193 CCDC88BA6NC98 1476 aa30.73■■■□□ 2.51
CCDC142-203ENST00000454193 SMARCA2P51531 1590 aa30.69■■■□□ 2.5
CCDC142-203ENST00000454193 BICRAQ9NZM4 1560 aa30.58■■■□□ 2.49
CCDC142-203ENST00000454193 PABPN1Q86U42 306 aaKnown RBP eCLIP30.58■■■□□ 2.49
CCDC142-203ENST00000454193 ABCC8Q09428 1581 aa30.57■■■□□ 2.48
CCDC142-203ENST00000454193 ZEB1P37275 1124 aaPredicted RBP30.49■■■□□ 2.47
CCDC142-203ENST00000454193 PEG3Q9GZU2 1588 aa30.38■■■□□ 2.45
CCDC142-203ENST00000454193 SOGA1O94964 1423 aa30.28■■■□□ 2.44
CCDC142-203ENST00000454193 EEA1Q15075 1411 aa30.24■■■□□ 2.43
CCDC142-203ENST00000454193 CSRNP3Q8WYN3 585 aa30.16■■■□□ 2.42
CCDC142-203ENST00000454193 ATAD2BQ9ULI0 1458 aa30.15■■■□□ 2.42
CCDC142-203ENST00000454193 WRNQ14191 1432 aaPredicted RBP eCLIP30.15■■■□□ 2.42
CCDC142-203ENST00000454193 CEP162Q5TB80 1403 aa30.14■■■□□ 2.42
CCDC142-203ENST00000454193 TNIKQ9UKE5 1360 aa30.13■■■□□ 2.41
CCDC142-203ENST00000454193 RUSC2Q8N2Y8 1516 aa30.1■■■□□ 2.41
CCDC142-203ENST00000454193 BAZ1BQ9UIG0 1483 aaKnown RBP30.08■■■□□ 2.41
CCDC142-203ENST00000454193 UBTFP17480 764 aaKnown RBP30.02■■■□□ 2.4
CCDC142-203ENST00000454193 GOLGA3Q08378 1498 aa29.98■■■□□ 2.39
CCDC142-203ENST00000454193 SYNJ1O43426 1573 aa29.96■■■□□ 2.39
CCDC142-203ENST00000454193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.85■■■□□ 2.37
CCDC142-203ENST00000454193 CEP164Q9UPV0 1460 aa29.84■■■□□ 2.37
CCDC142-203ENST00000454193 CCER1Q8TC90 406 aaPredicted RBP29.82■■■□□ 2.36
CCDC142-203ENST00000454193 TTBK1Q5TCY1 1321 aaPredicted RBP29.81■■■□□ 2.36
CCDC142-203ENST00000454193 KIF21BO75037 1637 aa29.78■■■□□ 2.36
CCDC142-203ENST00000454193 TOP2BQ02880 1626 aa29.65■■■□□ 2.34
CCDC142-203ENST00000454193 NCAPD3P42695 1498 aa29.62■■■□□ 2.33
CCDC142-203ENST00000454193 CLIP1P30622 1438 aa29.62■■■□□ 2.33
CCDC142-203ENST00000454193 HMGXB3Q12766 1538 aa29.61■■■□□ 2.33
CCDC142-203ENST00000454193 RAPGEF2Q9Y4G8 1499 aa29.57■■■□□ 2.32
CCDC142-203ENST00000454193 BIVM-ERCC5R4GMW8 1640 aa29.54■■■□□ 2.32
CCDC142-203ENST00000454193 PELP1Q8IZL8 1130 aaKnown RBP29.52■■■□□ 2.32
CCDC142-203ENST00000454193 VPS8Q8N3P4 1428 aa29.49■■■□□ 2.31
CCDC142-203ENST00000454193 APLP2Q06481 763 aa29.38■■■□□ 2.29
CCDC142-203ENST00000454193 ERICH3Q5RHP9 1530 aa29.35■■■□□ 2.29
CCDC142-203ENST00000454193 CFTRP13569 1480 aa29.35■■■□□ 2.29
CCDC142-203ENST00000454193 RANGAP1P46060 587 aaPredicted RBP29.34■■■□□ 2.29
CCDC142-203ENST00000454193 CUX1P39880 1505 aa29.34■■■□□ 2.29
CCDC142-203ENST00000454193 PRXQ9BXM0 1461 aa29.33■■■□□ 2.29
CCDC142-203ENST00000454193 KIF27Q86VH2 1401 aa29.25■■■□□ 2.27
CCDC142-203ENST00000454193 HNRNPUL2Q1KMD3 747 aaKnown RBP29.24■■■□□ 2.27
CCDC142-203ENST00000454193 DIEXFQ68CQ4 756 aaKnown RBP29.18■■■□□ 2.26
CCDC142-203ENST00000454193 ARAP1Q96P48 1450 aa29.12■■■□□ 2.25
CCDC142-203ENST00000454193 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
CCDC142-203ENST00000454193 CADPSQ9ULU8 1353 aa29.04■■■□□ 2.24
CCDC142-203ENST00000454193 ZNF316A6NFI3 1004 aaPredicted RBP29.01■■■□□ 2.23
CCDC142-203ENST00000454193 SCAF1Q9H7N4 1312 aaKnown RBP29.01■■■□□ 2.23
CCDC142-203ENST00000454193 CUX2O14529 1486 aa28.94■■■□□ 2.22
CCDC142-203ENST00000454193 KANK4Q5T7N3 995 aaPredicted RBP28.92■■■□□ 2.22
CCDC142-203ENST00000454193 IGF1RP08069 1367 aa28.9■■■□□ 2.22
CCDC142-203ENST00000454193 ARHGAP35Q9NRY4 1499 aa28.9■■■□□ 2.22
CCDC142-203ENST00000454193 CC2D2AQ9P2K1 1620 aa28.86■■■□□ 2.21
CCDC142-203ENST00000454193 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
CCDC142-203ENST00000454193 ACIN1Q9UKV3 1341 aaKnown RBP28.85■■■□□ 2.21
CCDC142-203ENST00000454193 CARMIL1Q5VZK9 1371 aa28.79■■■□□ 2.2
CCDC142-203ENST00000454193 RRBP1Q9P2E9 1410 aaKnown RBP28.79■■■□□ 2.2
CCDC142-203ENST00000454193 CENPBP07199 599 aaPredicted RBP28.78■■■□□ 2.2
CCDC142-203ENST00000454193 NEUROD1Q13562 356 aa28.77■■■□□ 2.2
CCDC142-203ENST00000454193 CLSPNQ9HAW4 1339 aa28.76■■■□□ 2.19
CCDC142-203ENST00000454193 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
CCDC142-203ENST00000454193 DHX57Q6P158 1386 aaKnown RBP28.7■■■□□ 2.18
CCDC142-203ENST00000454193 CCNB3Q8WWL7 1395 aa28.67■■■□□ 2.18
CCDC142-203ENST00000454193 MAP3K1Q13233 1512 aa28.61■■■□□ 2.17
CCDC142-203ENST00000454193 DNMBPQ6XZF7 1577 aa28.61■■■□□ 2.17
CCDC142-203ENST00000454193 TIAM1Q13009 1591 aa28.58■■■□□ 2.17
CCDC142-203ENST00000454193 ABCA10Q8WWZ4 1543 aa28.54■■■□□ 2.16
CCDC142-203ENST00000454193 RAD54L2Q9Y4B4 1467 aa28.54■■■□□ 2.16
CCDC142-203ENST00000454193 TOPBP1Q92547 1522 aa28.54■■■□□ 2.16
CCDC142-203ENST00000454193 FHAD1B1AJZ9 1412 aa28.53■■■□□ 2.16
CCDC142-203ENST00000454193 POLA1P09884 1462 aaPredicted RBP28.52■■■□□ 2.16
CCDC142-203ENST00000454193 MIER1Q8N108 512 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms