RNA–Protein interactions for RNA: ENST00000463381.5

AGAP3-205, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 2 BASIC

Gene AGAP3, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-205ENST00000463381 NISCHQ9Y2I1 1504 aa25.96■■□□□ 1.75
AGAP3-205ENST00000463381 SHROOM4Q9ULL8 1493 aa22.42■■□□□ 1.18
AGAP3-205ENST00000463381 SUPT5HO00267 1087 aaKnown RBP22.15■■□□□ 1.14
AGAP3-205ENST00000463381 CCDC180Q9P1Z9 1646 aa22.14■■□□□ 1.13
AGAP3-205ENST00000463381 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
AGAP3-205ENST00000463381 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
AGAP3-205ENST00000463381 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.06
AGAP3-205ENST00000463381 DCAF8L2P0C7V8 631 aa21.55■■□□□ 1.04
AGAP3-205ENST00000463381 HRCP23327 699 aa21.55■■□□□ 1.04
AGAP3-205ENST00000463381 PCGF6Q9BYE7 350 aa21.35■■□□□ 1.01
AGAP3-205ENST00000463381 DCAF1Q9Y4B6 1507 aa21.31■■□□□ 1
AGAP3-205ENST00000463381 PPARGC1BQ86YN6 1023 aaKnown RBP21.11■□□□□ 0.97
AGAP3-205ENST00000463381 LOC105371045A0A1W2PR82 267 aa21.08■□□□□ 0.96
AGAP3-205ENST00000463381 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
AGAP3-205ENST00000463381 TRIM26Q12899 539 aaPredicted RBP20.82■□□□□ 0.92
AGAP3-205ENST00000463381 ABCC9O60706 1549 aa20.73■□□□□ 0.91
AGAP3-205ENST00000463381 SCRIBQ14160 1630 aa20.71■□□□□ 0.91
AGAP3-205ENST00000463381 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
AGAP3-205ENST00000463381 TRIM41Q8WV44 630 aa20.56■□□□□ 0.88
AGAP3-205ENST00000463381 NACADO15069 1562 aa20.52■□□□□ 0.88
AGAP3-205ENST00000463381 ZEB1P37275 1124 aaPredicted RBP20.48■□□□□ 0.87
AGAP3-205ENST00000463381 FAM9AQ8IZU1 332 aaPredicted RBP20.47■□□□□ 0.87
AGAP3-205ENST00000463381 RB1CC1Q8TDY2 1594 aa20.45■□□□□ 0.86
AGAP3-205ENST00000463381 EHMT2Q96KQ7 1210 aa20.34■□□□□ 0.85
AGAP3-205ENST00000463381 CECR2Q9BXF3 1484 aa20.26■□□□□ 0.83
AGAP3-205ENST00000463381 MROH2BQ7Z745 1585 aa20.17■□□□□ 0.82
AGAP3-205ENST00000463381 MYT1Q01538 1121 aa20.15■□□□□ 0.82
AGAP3-205ENST00000463381 SCAF1Q9H7N4 1312 aaKnown RBP20.1■□□□□ 0.81
AGAP3-205ENST00000463381 WIZO95785 1651 aa20.06■□□□□ 0.8
AGAP3-205ENST00000463381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.98■□□□□ 0.79
AGAP3-205ENST00000463381 BAZ1AQ9NRL2 1556 aaPredicted RBP19.94■□□□□ 0.78
AGAP3-205ENST00000463381 CCER1Q8TC90 406 aaPredicted RBP19.93■□□□□ 0.78
AGAP3-205ENST00000463381 UNC13AQ9UPW8 1703 aa19.89■□□□□ 0.77
AGAP3-205ENST00000463381 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
AGAP3-205ENST00000463381 SMARCA4P51532 1647 aa19.79■□□□□ 0.76
AGAP3-205ENST00000463381 TTBK1Q5TCY1 1321 aaPredicted RBP19.77■□□□□ 0.75
AGAP3-205ENST00000463381 ACIN1Q9UKV3 1341 aaKnown RBP19.77■□□□□ 0.75
AGAP3-205ENST00000463381 ABCC8Q09428 1581 aa19.75■□□□□ 0.75
AGAP3-205ENST00000463381 TOP2AP11388 1531 aaKnown RBP19.74■□□□□ 0.75
AGAP3-205ENST00000463381 CCDC88BA6NC98 1476 aa19.74■□□□□ 0.75
AGAP3-205ENST00000463381 NEUROD1Q13562 356 aa19.73■□□□□ 0.75
AGAP3-205ENST00000463381 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.752e-6■■■■■ 28.3
AGAP3-205ENST00000463381 PABPN1Q86U42 306 aaKnown RBP eCLIP19.72■□□□□ 0.753e-6■■□□□ 13.3
AGAP3-205ENST00000463381 DIEXFQ68CQ4 756 aaKnown RBP19.71■□□□□ 0.75
AGAP3-205ENST00000463381 CEP162Q5TB80 1403 aa19.69■□□□□ 0.74
AGAP3-205ENST00000463381 BICRAQ9NZM4 1560 aa19.67■□□□□ 0.74
AGAP3-205ENST00000463381 SOGA1O94964 1423 aa19.65■□□□□ 0.74
AGAP3-205ENST00000463381 SMARCA2P51531 1590 aa19.62■□□□□ 0.73
AGAP3-205ENST00000463381 TNIKQ9UKE5 1360 aa19.62■□□□□ 0.73
AGAP3-205ENST00000463381 CENPBP07199 599 aaPredicted RBP19.59■□□□□ 0.73
AGAP3-205ENST00000463381 GTF3C3Q9Y5Q9 886 aa19.57■□□□□ 0.72
AGAP3-205ENST00000463381 CSRNP3Q8WYN3 585 aa19.57■□□□□ 0.72
AGAP3-205ENST00000463381 UBTFP17480 764 aaKnown RBP19.56■□□□□ 0.72
AGAP3-205ENST00000463381 RUSC2Q8N2Y8 1516 aa19.54■□□□□ 0.72
AGAP3-205ENST00000463381 EEA1Q15075 1411 aa19.52■□□□□ 0.71
AGAP3-205ENST00000463381 ZNF316A6NFI3 1004 aaPredicted RBP19.47■□□□□ 0.71
AGAP3-205ENST00000463381 PEG3Q9GZU2 1588 aa19.43■□□□□ 0.7
AGAP3-205ENST00000463381 GOLGA3Q08378 1498 aa19.43■□□□□ 0.7
AGAP3-205ENST00000463381 HNRNPUL2Q1KMD3 747 aaKnown RBP19.35■□□□□ 0.69
AGAP3-205ENST00000463381 ATAD2BQ9ULI0 1458 aa19.34■□□□□ 0.69
AGAP3-205ENST00000463381 YTHDC1Q96MU7 727 aaKnown RBP19.32■□□□□ 0.68
AGAP3-205ENST00000463381 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
AGAP3-205ENST00000463381 BAZ1BQ9UIG0 1483 aaKnown RBP19.27■□□□□ 0.68
AGAP3-205ENST00000463381 MIER1Q8N108 512 aa19.26■□□□□ 0.67
AGAP3-205ENST00000463381 CLIP1P30622 1438 aa19.26■□□□□ 0.67
AGAP3-205ENST00000463381 SYNJ1O43426 1573 aa19.24■□□□□ 0.67
AGAP3-205ENST00000463381 KIF21BO75037 1637 aa19.23■□□□□ 0.67
AGAP3-205ENST00000463381 VPS8Q8N3P4 1428 aa19.19■□□□□ 0.66
AGAP3-205ENST00000463381 APLP2Q06481 763 aa19.17■□□□□ 0.66
AGAP3-205ENST00000463381 RANGAP1P46060 587 aaPredicted RBP19.15■□□□□ 0.66
AGAP3-205ENST00000463381 RAPGEF2Q9Y4G8 1499 aa19.13■□□□□ 0.65
AGAP3-205ENST00000463381 NCAPD3P42695 1498 aa19■□□□□ 0.63
AGAP3-205ENST00000463381 HMGXB3Q12766 1538 aa18.97■□□□□ 0.63
AGAP3-205ENST00000463381 DHX57Q6P158 1386 aaKnown RBP18.95■□□□□ 0.62
AGAP3-205ENST00000463381 TOP2BQ02880 1626 aa18.94■□□□□ 0.62
AGAP3-205ENST00000463381 CLSPNQ9HAW4 1339 aa18.94■□□□□ 0.62
AGAP3-205ENST00000463381 BCL11AQ9H165 835 aa18.91■□□□□ 0.62
AGAP3-205ENST00000463381 KANK4Q5T7N3 995 aaPredicted RBP18.9■□□□□ 0.62
AGAP3-205ENST00000463381 ARAP1Q96P48 1450 aa18.89■□□□□ 0.61
AGAP3-205ENST00000463381 PRXQ9BXM0 1461 aa18.87■□□□□ 0.61
AGAP3-205ENST00000463381 ERICH3Q5RHP9 1530 aa18.86■□□□□ 0.61
AGAP3-205ENST00000463381 BIVM-ERCC5R4GMW8 1640 aa18.86■□□□□ 0.61
AGAP3-205ENST00000463381 CFTRP13569 1480 aa18.8■□□□□ 0.6
AGAP3-205ENST00000463381 CUX1P39880 1505 aa18.79■□□□□ 0.6
AGAP3-205ENST00000463381 RRBP1Q9P2E9 1410 aaKnown RBP18.79■□□□□ 0.6
AGAP3-205ENST00000463381 SUPT16HQ9Y5B9 1047 aaKnown RBP18.76■□□□□ 0.59
AGAP3-205ENST00000463381 CCNB3Q8WWL7 1395 aa18.72■□□□□ 0.59
AGAP3-205ENST00000463381 ITGAEP38570 1179 aa18.72■□□□□ 0.59
AGAP3-205ENST00000463381 KIF27Q86VH2 1401 aa18.72■□□□□ 0.59
AGAP3-205ENST00000463381 CUX2O14529 1486 aa18.71■□□□□ 0.59
AGAP3-205ENST00000463381 ARHGAP35Q9NRY4 1499 aa18.68■□□□□ 0.58
AGAP3-205ENST00000463381 CADPSQ9ULU8 1353 aa18.63■□□□□ 0.57
AGAP3-205ENST00000463381 RAB3GAP2Q9H2M9 1393 aa18.61■□□□□ 0.57
AGAP3-205ENST00000463381 KCNH8Q96L42 1107 aa18.6■□□□□ 0.57
AGAP3-205ENST00000463381 PRDM2Q13029 1718 aa18.6■□□□□ 0.57
AGAP3-205ENST00000463381 CC2D2AQ9P2K1 1620 aa18.59■□□□□ 0.57
AGAP3-205ENST00000463381 ANP32EQ9BTT0 268 aa18.58■□□□□ 0.57
AGAP3-205ENST00000463381 MAPKBP1O60336 1514 aa18.57■□□□□ 0.56
AGAP3-205ENST00000463381 TSHZ2Q9NRE2 1034 aa18.54■□□□□ 0.56
AGAP3-205ENST00000463381 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms