RNA–Protein interactions for RNA: ENST00000462332.1

GTPBP1-206, Transcript of GTP binding protein 1, humanhuman

TSL 2

Gene GTPBP1, Length 3,035 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP1-206ENST00000462332 NISCHQ9Y2I1 1504 aa23.91■■□□□ 1.42
GTPBP1-206ENST00000462332 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
GTPBP1-206ENST00000462332 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
GTPBP1-206ENST00000462332 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
GTPBP1-206ENST00000462332 SHROOM4Q9ULL8 1493 aa20.03■□□□□ 0.8
GTPBP1-206ENST00000462332 DCAF1Q9Y4B6 1507 aa19.6■□□□□ 0.73
GTPBP1-206ENST00000462332 ABCC9O60706 1549 aa19.59■□□□□ 0.73
GTPBP1-206ENST00000462332 SUPT5HO00267 1087 aaKnown RBP19.38■□□□□ 0.69
GTPBP1-206ENST00000462332 PELP1Q8IZL8 1130 aaKnown RBP19.34■□□□□ 0.69
GTPBP1-206ENST00000462332 SCRIBQ14160 1630 aa19.25■□□□□ 0.67
GTPBP1-206ENST00000462332 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
GTPBP1-206ENST00000462332 NACADO15069 1562 aa19.17■□□□□ 0.66
GTPBP1-206ENST00000462332 HRCP23327 699 aa19.1■□□□□ 0.65
GTPBP1-206ENST00000462332 RB1CC1Q8TDY2 1594 aa19■□□□□ 0.63
GTPBP1-206ENST00000462332 MYT1Q01538 1121 aa18.8■□□□□ 0.6
GTPBP1-206ENST00000462332 RSF1Q96T23 1441 aaPredicted RBP18.7■□□□□ 0.58
GTPBP1-206ENST00000462332 CECR2Q9BXF3 1484 aa18.69■□□□□ 0.58
GTPBP1-206ENST00000462332 UNC13AQ9UPW8 1703 aa18.68■□□□□ 0.58
GTPBP1-206ENST00000462332 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
GTPBP1-206ENST00000462332 MROH2BQ7Z745 1585 aa18.57■□□□□ 0.56
GTPBP1-206ENST00000462332 PPARGC1BQ86YN6 1023 aaKnown RBP18.57■□□□□ 0.56
GTPBP1-206ENST00000462332 CHIC1Q5VXU3 224 aa18.52■□□□□ 0.56
GTPBP1-206ENST00000462332 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
GTPBP1-206ENST00000462332 WIZO95785 1651 aa18.45■□□□□ 0.54
GTPBP1-206ENST00000462332 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
GTPBP1-206ENST00000462332 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
GTPBP1-206ENST00000462332 SMARCA4P51532 1647 aa18.34■□□□□ 0.53
GTPBP1-206ENST00000462332 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
GTPBP1-206ENST00000462332 TOP2AP11388 1531 aaKnown RBP18.15■□□□□ 0.5
GTPBP1-206ENST00000462332 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
GTPBP1-206ENST00000462332 CCDC88BA6NC98 1476 aa18.05■□□□□ 0.48
GTPBP1-206ENST00000462332 SMARCA2P51531 1590 aa18.03■□□□□ 0.48
GTPBP1-206ENST00000462332 ATAD2BQ9ULI0 1458 aa17.99■□□□□ 0.47
GTPBP1-206ENST00000462332 PEG3Q9GZU2 1588 aa17.98■□□□□ 0.47
GTPBP1-206ENST00000462332 LOC105371045A0A1W2PR82 267 aa17.97■□□□□ 0.47
GTPBP1-206ENST00000462332 BAZ1BQ9UIG0 1483 aaKnown RBP17.94■□□□□ 0.46
GTPBP1-206ENST00000462332 FAM9AQ8IZU1 332 aaPredicted RBP17.94■□□□□ 0.46
GTPBP1-206ENST00000462332 EIF4G1Q04637 1599 aaKnown RBP17.92■□□□□ 0.46
GTPBP1-206ENST00000462332 ABCC8Q09428 1581 aa17.85■□□□□ 0.45
GTPBP1-206ENST00000462332 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.44
GTPBP1-206ENST00000462332 EHMT2Q96KQ7 1210 aa17.83■□□□□ 0.44
GTPBP1-206ENST00000462332 TTBK1Q5TCY1 1321 aaPredicted RBP17.81■□□□□ 0.44
GTPBP1-206ENST00000462332 ACIN1Q9UKV3 1341 aaKnown RBP17.76■□□□□ 0.43
GTPBP1-206ENST00000462332 NCAPD3P42695 1498 aa17.73■□□□□ 0.43
GTPBP1-206ENST00000462332 TRIM26Q12899 539 aaPredicted RBP17.72■□□□□ 0.43
GTPBP1-206ENST00000462332 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
GTPBP1-206ENST00000462332 NEUROD1Q13562 356 aa17.63■□□□□ 0.41
GTPBP1-206ENST00000462332 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
GTPBP1-206ENST00000462332 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
GTPBP1-206ENST00000462332 GTF3C3Q9Y5Q9 886 aa17.61■□□□□ 0.41
GTPBP1-206ENST00000462332 SOGA1O94964 1423 aa17.55■□□□□ 0.4
GTPBP1-206ENST00000462332 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
GTPBP1-206ENST00000462332 CENPBP07199 599 aaPredicted RBP17.5■□□□□ 0.39
GTPBP1-206ENST00000462332 RUSC2Q8N2Y8 1516 aa17.49■□□□□ 0.39
GTPBP1-206ENST00000462332 CFTRP13569 1480 aa17.44■□□□□ 0.38
GTPBP1-206ENST00000462332 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
GTPBP1-206ENST00000462332 BCL11AQ9H165 835 aa17.37■□□□□ 0.37
GTPBP1-206ENST00000462332 CADPSQ9ULU8 1353 aa17.36■□□□□ 0.37
GTPBP1-206ENST00000462332 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
GTPBP1-206ENST00000462332 EEA1Q15075 1411 aa17.35■□□□□ 0.37
GTPBP1-206ENST00000462332 CUX1P39880 1505 aa17.33■□□□□ 0.36
GTPBP1-206ENST00000462332 DNAJC5BQ9UF47 199 aa17.32■□□□□ 0.36
GTPBP1-206ENST00000462332 UBTFP17480 764 aaKnown RBP17.32■□□□□ 0.36
GTPBP1-206ENST00000462332 BIVM-ERCC5R4GMW8 1640 aa17.31■□□□□ 0.36
GTPBP1-206ENST00000462332 PRDM2Q13029 1718 aa17.28■□□□□ 0.36
GTPBP1-206ENST00000462332 NESP48681 1621 aa17.27■□□□□ 0.36
GTPBP1-206ENST00000462332 PRKCSHP14314 528 aaPredicted RBP17.25■□□□□ 0.35
GTPBP1-206ENST00000462332 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
GTPBP1-206ENST00000462332 CEP162Q5TB80 1403 aa17.22■□□□□ 0.35
GTPBP1-206ENST00000462332 FANCD2Q9BXW9 1451 aa17.21■□□□□ 0.35
GTPBP1-206ENST00000462332 TNIKQ9UKE5 1360 aa17.2■□□□□ 0.34
GTPBP1-206ENST00000462332 CEP164Q9UPV0 1460 aa17.19■□□□□ 0.34
GTPBP1-206ENST00000462332 RANGAP1P46060 587 aaPredicted RBP17.16■□□□□ 0.34
GTPBP1-206ENST00000462332 RAPGEF2Q9Y4G8 1499 aa17.16■□□□□ 0.34
GTPBP1-206ENST00000462332 DIEXFQ68CQ4 756 aaKnown RBP17.15■□□□□ 0.34
GTPBP1-206ENST00000462332 KIF21BO75037 1637 aa17.15■□□□□ 0.34
GTPBP1-206ENST00000462332 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
GTPBP1-206ENST00000462332 KIF27Q86VH2 1401 aa17.12■□□□□ 0.33
GTPBP1-206ENST00000462332 CUX2O14529 1486 aa17.09■□□□□ 0.33
GTPBP1-206ENST00000462332 LAMC3Q9Y6N6 1575 aa17.08■□□□□ 0.32
GTPBP1-206ENST00000462332 ANP32EQ9BTT0 268 aa17.06■□□□□ 0.32
GTPBP1-206ENST00000462332 TOPBP1Q92547 1522 aa17.03■□□□□ 0.32
GTPBP1-206ENST00000462332 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
GTPBP1-206ENST00000462332 PRXQ9BXM0 1461 aa17.03■□□□□ 0.32
GTPBP1-206ENST00000462332 CLIP1P30622 1438 aa17.02■□□□□ 0.32
GTPBP1-206ENST00000462332 RAD54L2Q9Y4B4 1467 aa17.02■□□□□ 0.31
GTPBP1-206ENST00000462332 PDS5BQ9NTI5 1447 aa17■□□□□ 0.31
GTPBP1-206ENST00000462332 POLA1P09884 1462 aaPredicted RBP16.99■□□□□ 0.31
GTPBP1-206ENST00000462332 URB2Q14146 1524 aaKnown RBP16.99■□□□□ 0.31
GTPBP1-206ENST00000462332 KIF21AQ7Z4S6 1674 aa16.97■□□□□ 0.31
GTPBP1-206ENST00000462332 ERICH3Q5RHP9 1530 aa16.97■□□□□ 0.31
GTPBP1-206ENST00000462332 IGF1RP08069 1367 aa16.96■□□□□ 0.31
GTPBP1-206ENST00000462332 ERICH6Q7L0X2 663 aa16.94■□□□□ 0.3
GTPBP1-206ENST00000462332 CARMIL1Q5VZK9 1371 aa16.9■□□□□ 0.3
GTPBP1-206ENST00000462332 ABCA10Q8WWZ4 1543 aa16.88■□□□□ 0.29
GTPBP1-206ENST00000462332 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
GTPBP1-206ENST00000462332 YTHDC1Q96MU7 727 aaKnown RBP16.87■□□□□ 0.29
GTPBP1-206ENST00000462332 VPS8Q8N3P4 1428 aa16.86■□□□□ 0.29
GTPBP1-206ENST00000462332 TDRD9Q8NDG6 1382 aaKnown RBP16.86■□□□□ 0.29
GTPBP1-206ENST00000462332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms