RNA–Protein interactions for RNA: ENST00000527537.5

RDX-203, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-203ENST00000527537 NISCHQ9Y2I1 1504 aa12.22□□□□□ -0.45
RDX-203ENST00000527537 PELP1Q8IZL8 1130 aaKnown RBP11.82□□□□□ -0.52
RDX-203ENST00000527537 MYT1Q01538 1121 aa11.53□□□□□ -0.56
RDX-203ENST00000527537 HRCP23327 699 aa11.48□□□□□ -0.57
RDX-203ENST00000527537 PPARGC1BQ86YN6 1023 aaKnown RBP11.16□□□□□ -0.62
RDX-203ENST00000527537 SCAF1Q9H7N4 1312 aaKnown RBP11.11□□□□□ -0.63
RDX-203ENST00000527537 TTBK1Q5TCY1 1321 aaPredicted RBP10.98□□□□□ -0.65
RDX-203ENST00000527537 PCGF6Q9BYE7 350 aa10.96□□□□□ -0.66
RDX-203ENST00000527537 MYO15BQ96JP2 1530 aa10.73□□□□□ -0.69
RDX-203ENST00000527537 SHROOM4Q9ULL8 1493 aa10.71□□□□□ -0.7
RDX-203ENST00000527537 ACIN1Q9UKV3 1341 aaKnown RBP10.7□□□□□ -0.7
RDX-203ENST00000527537 BCL11AQ9H165 835 aa10.67□□□□□ -0.7
RDX-203ENST00000527537 PRKCSHP14314 528 aaPredicted RBP10.62□□□□□ -0.71
RDX-203ENST00000527537 NEUROD1Q13562 356 aa10.62□□□□□ -0.71
RDX-203ENST00000527537 ZEB1P37275 1124 aaPredicted RBP10.61□□□□□ -0.71
RDX-203ENST00000527537 GTF3C3Q9Y5Q9 886 aa10.61□□□□□ -0.71
RDX-203ENST00000527537 DCAF1Q9Y4B6 1507 aa10.58□□□□□ -0.72
RDX-203ENST00000527537 CENPBP07199 599 aaPredicted RBP10.57□□□□□ -0.72
RDX-203ENST00000527537 FAM9AQ8IZU1 332 aaPredicted RBP10.56□□□□□ -0.72
RDX-203ENST00000527537 SUPT5HO00267 1087 aaKnown RBP10.54□□□□□ -0.72
RDX-203ENST00000527537 CCDC180Q9P1Z9 1646 aa10.53□□□□□ -0.72
RDX-203ENST00000527537 TRIM26Q12899 539 aaPredicted RBP10.52□□□□□ -0.73
RDX-203ENST00000527537 CHIC1Q5VXU3 224 aa10.44□□□□□ -0.74
RDX-203ENST00000527537 DCAF8L2P0C7V8 631 aa10.41□□□□□ -0.74
RDX-203ENST00000527537 ERICH6Q7L0X2 663 aa10.4□□□□□ -0.75
RDX-203ENST00000527537 ANP32EQ9BTT0 268 aa10.36□□□□□ -0.75
RDX-203ENST00000527537 APLP2Q06481 763 aa10.33□□□□□ -0.76
RDX-203ENST00000527537 ZCCHC6Q5VYS8 1495 aaKnown RBP10.33□□□□□ -0.76
RDX-203ENST00000527537 CSRNP3Q8WYN3 585 aa10.24□□□□□ -0.77
RDX-203ENST00000527537 DIEXFQ68CQ4 756 aaKnown RBP10.24□□□□□ -0.77
RDX-203ENST00000527537 LOC105371045A0A1W2PR82 267 aa10.23□□□□□ -0.77
RDX-203ENST00000527537 TSHZ2Q9NRE2 1034 aa10.09□□□□□ -0.79
RDX-203ENST00000527537 YTHDC1Q96MU7 727 aaKnown RBP10.08□□□□□ -0.8
RDX-203ENST00000527537 TRIM41Q8WV44 630 aa10.05□□□□□ -0.8
RDX-203ENST00000527537 CLSPNQ9HAW4 1339 aa10.01□□□□□ -0.81
RDX-203ENST00000527537 SUPT16HQ9Y5B9 1047 aaKnown RBP10□□□□□ -0.81
RDX-203ENST00000527537 CCER1Q8TC90 406 aaPredicted RBP9.98□□□□□ -0.81
RDX-203ENST00000527537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.98□□□□□ -0.81
RDX-203ENST00000527537 ANO8Q9HCE9 1232 aaPredicted RBP9.94□□□□□ -0.82
RDX-203ENST00000527537 ZNF316A6NFI3 1004 aaPredicted RBP9.93□□□□□ -0.82
RDX-203ENST00000527537 MIER1Q8N108 512 aa9.93□□□□□ -0.82
RDX-203ENST00000527537 UBE2Q2Q8WVN8 375 aa9.84□□□□□ -0.83
RDX-203ENST00000527537 SCRIBQ14160 1630 aa9.81□□□□□ -0.84
RDX-203ENST00000527537 RBM19Q9Y4C8 960 aaKnown RBP9.81□□□□□ -0.84
RDX-203ENST00000527537 EHMT2Q96KQ7 1210 aa9.78□□□□□ -0.84
RDX-203ENST00000527537 MYT1LQ9UL68 1186 aa9.78□□□□□ -0.84
RDX-203ENST00000527537 MSH5O43196 834 aa9.77□□□□□ -0.85
RDX-203ENST00000527537 SALL2Q9Y467 1007 aaPredicted RBP9.77□□□□□ -0.85
RDX-203ENST00000527537 ABCC9O60706 1549 aa9.76□□□□□ -0.85
RDX-203ENST00000527537 ERICH6BQ5W0A0 696 aa9.74□□□□□ -0.85
RDX-203ENST00000527537 DEKP35659 375 aaKnown RBP9.73□□□□□ -0.85
RDX-203ENST00000527537 RSF1Q96T23 1441 aaPredicted RBP9.73□□□□□ -0.85
RDX-203ENST00000527537 SLC24A1O60721 1099 aa9.73□□□□□ -0.85
RDX-203ENST00000527537 EIF5BO60841 1220 aaKnown RBP9.71□□□□□ -0.86
RDX-203ENST00000527537 CCDC136Q96JN2 1154 aa9.7□□□□□ -0.86
RDX-203ENST00000527537 FANCIQ9NVI1 1328 aa9.66□□□□□ -0.86
RDX-203ENST00000527537 RB1CC1Q8TDY2 1594 aa9.66□□□□□ -0.86
RDX-203ENST00000527537 BCANQ96GW7 911 aa9.66□□□□□ -0.86
RDX-203ENST00000527537 FKBP8Q14318 412 aa9.61□□□□□ -0.87
RDX-203ENST00000527537 CECR2Q9BXF3 1484 aa9.61□□□□□ -0.87
RDX-203ENST00000527537 PKNOX2Q96KN3 472 aa9.58□□□□□ -0.88
RDX-203ENST00000527537 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.57□□□□□ -0.88
RDX-203ENST00000527537 DAXXQ9UER7 740 aaPredicted RBP9.57□□□□□ -0.88
RDX-203ENST00000527537 MROH2BQ7Z745 1585 aa9.55□□□□□ -0.88
RDX-203ENST00000527537 ITGAEP38570 1179 aa9.53□□□□□ -0.88
RDX-203ENST00000527537 IL27Q8NEV9 243 aa9.53□□□□□ -0.88
RDX-203ENST00000527537 NACADO15069 1562 aa9.51□□□□□ -0.89
RDX-203ENST00000527537 WIZO95785 1651 aa9.51□□□□□ -0.89
RDX-203ENST00000527537 NEFLP07196 543 aa9.5□□□□□ -0.89
RDX-203ENST00000527537 PLEKHG5O94827 1062 aa9.5□□□□□ -0.89
RDX-203ENST00000527537 RTN4Q9NQC3 1192 aaKnown RBP9.48□□□□□ -0.89
RDX-203ENST00000527537 NBR1Q14596 966 aa9.46□□□□□ -0.9
RDX-203ENST00000527537 CDK11AQ9UQ88 783 aaPredicted RBP9.45□□□□□ -0.9
RDX-203ENST00000527537 PODXL2Q9NZ53 605 aa9.45□□□□□ -0.9
RDX-203ENST00000527537 WRNQ14191 1432 aaPredicted RBP eCLIP9.44□□□□□ -0.9
RDX-203ENST00000527537 KCNH8Q96L42 1107 aa9.43□□□□□ -0.9
RDX-203ENST00000527537 NOP58Q9Y2X3 529 aaKnown RBP9.41□□□□□ -0.9
RDX-203ENST00000527537 BAZ1AQ9NRL2 1556 aaPredicted RBP9.38□□□□□ -0.91
RDX-203ENST00000527537 RTL5Q5HYW3 569 aaPredicted RBP9.37□□□□□ -0.91
RDX-203ENST00000527537 ABCC8Q09428 1581 aa9.37□□□□□ -0.91
RDX-203ENST00000527537 PAK3O75914 559 aaPredicted RBP9.37□□□□□ -0.91
RDX-203ENST00000527537 C11orf95C9JLR9 678 aaPredicted RBP9.34□□□□□ -0.91
RDX-203ENST00000527537 PABPN1Q86U42 306 aaKnown RBP eCLIP9.33□□□□□ -0.92
RDX-203ENST00000527537 CCDC88BA6NC98 1476 aa9.33□□□□□ -0.92
RDX-203ENST00000527537 HNRNPUL2Q1KMD3 747 aaKnown RBP9.31□□□□□ -0.92
RDX-203ENST00000527537 UBTFP17480 764 aaKnown RBP9.31□□□□□ -0.92
RDX-203ENST00000527537 GLIPR1L2Q4G1C9 344 aa9.31□□□□□ -0.92
RDX-203ENST00000527537 ZMYND15Q9H091 742 aa9.31□□□□□ -0.92
RDX-203ENST00000527537 WASHC2AQ641Q2 1341 aa9.31□□□□□ -0.92
RDX-203ENST00000527537 EIF4G1Q04637 1599 aaKnown RBP9.3□□□□□ -0.92
RDX-203ENST00000527537 TOP2AP11388 1531 aaKnown RBP9.3□□□□□ -0.92
RDX-203ENST00000527537 SOGA1O94964 1423 aa9.3□□□□□ -0.92
RDX-203ENST00000527537 SMARCA4P51532 1647 aa9.29□□□□□ -0.92
RDX-203ENST00000527537 RSPH6AQ9H0K4 717 aa9.28□□□□□ -0.92
RDX-203ENST00000527537 WASHC2CQ9Y4E1 1318 aa9.28□□□□□ -0.92
RDX-203ENST00000527537 TRIM52Q96A61 297 aa9.27□□□□□ -0.92
RDX-203ENST00000527537 TIMELESSQ9UNS1 1208 aa9.27□□□□□ -0.92
RDX-203ENST00000527537 SMARCA2P51531 1590 aa9.27□□□□□ -0.93
RDX-203ENST00000527537 CEP162Q5TB80 1403 aa9.26□□□□□ -0.93
RDX-203ENST00000527537 RUSC2Q8N2Y8 1516 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms