RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 NISCHQ9Y2I1 1504 aa29.08■■■□□ 2.25
CCDC142-202ENST00000393965 SHROOM4Q9ULL8 1493 aa24.89■■□□□ 1.57
CCDC142-202ENST00000393965 CCDC180Q9P1Z9 1646 aa24.74■■□□□ 1.55
CCDC142-202ENST00000393965 ZCCHC6Q5VYS8 1495 aaKnown RBP24.54■■□□□ 1.52
CCDC142-202ENST00000393965 DCAF8L2P0C7V8 631 aa24.39■■□□□ 1.5
CCDC142-202ENST00000393965 SUPT5HO00267 1087 aaKnown RBP24.21■■□□□ 1.47
CCDC142-202ENST00000393965 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
CCDC142-202ENST00000393965 ABCC9O60706 1549 aa23.44■■□□□ 1.34
CCDC142-202ENST00000393965 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
CCDC142-202ENST00000393965 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.33
CCDC142-202ENST00000393965 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
CCDC142-202ENST00000393965 RSF1Q96T23 1441 aaPredicted RBP22.96■■□□□ 1.27
CCDC142-202ENST00000393965 NACADO15069 1562 aa22.91■■□□□ 1.26
CCDC142-202ENST00000393965 CECR2Q9BXF3 1484 aa22.86■■□□□ 1.25
CCDC142-202ENST00000393965 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
CCDC142-202ENST00000393965 LOC105371045A0A1W2PR82 267 aa22.78■■□□□ 1.24
CCDC142-202ENST00000393965 MROH2BQ7Z745 1585 aa22.7■■□□□ 1.23
CCDC142-202ENST00000393965 PCGF6Q9BYE7 350 aa22.7■■□□□ 1.22
CCDC142-202ENST00000393965 WIZO95785 1651 aa22.62■■□□□ 1.21
CCDC142-202ENST00000393965 EHMT2Q96KQ7 1210 aa22.54■■□□□ 1.2
CCDC142-202ENST00000393965 UNC13AQ9UPW8 1703 aa22.53■■□□□ 1.2
CCDC142-202ENST00000393965 PPARGC1BQ86YN6 1023 aaKnown RBP22.52■■□□□ 1.2
CCDC142-202ENST00000393965 FAM9AQ8IZU1 332 aaPredicted RBP22.44■■□□□ 1.18
CCDC142-202ENST00000393965 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
CCDC142-202ENST00000393965 PABPN1Q86U42 306 aaKnown RBP eCLIP22.41■■□□□ 1.18
CCDC142-202ENST00000393965 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
CCDC142-202ENST00000393965 HRCP23327 699 aa22.27■■□□□ 1.15
CCDC142-202ENST00000393965 SMARCA4P51532 1647 aa22.22■■□□□ 1.15
CCDC142-202ENST00000393965 BICRAQ9NZM4 1560 aa22.19■■□□□ 1.14
CCDC142-202ENST00000393965 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
CCDC142-202ENST00000393965 TOP2AP11388 1531 aaKnown RBP22.09■■□□□ 1.13
CCDC142-202ENST00000393965 CCDC88BA6NC98 1476 aa22.07■■□□□ 1.12
CCDC142-202ENST00000393965 ABCC8Q09428 1581 aa22.06■■□□□ 1.12
CCDC142-202ENST00000393965 SMARCA2P51531 1590 aa22.04■■□□□ 1.12
CCDC142-202ENST00000393965 TRIM26Q12899 539 aaPredicted RBP21.86■■□□□ 1.09
CCDC142-202ENST00000393965 TTBK1Q5TCY1 1321 aaPredicted RBP21.76■■□□□ 1.07
CCDC142-202ENST00000393965 SOGA1O94964 1423 aa21.76■■□□□ 1.07
CCDC142-202ENST00000393965 RUSC2Q8N2Y8 1516 aa21.73■■□□□ 1.07
CCDC142-202ENST00000393965 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
CCDC142-202ENST00000393965 ATAD2BQ9ULI0 1458 aa21.7■■□□□ 1.06
CCDC142-202ENST00000393965 BAZ1BQ9UIG0 1483 aaKnown RBP21.61■■□□□ 1.05
CCDC142-202ENST00000393965 SYNJ1O43426 1573 aa21.55■■□□□ 1.04
CCDC142-202ENST00000393965 WRNQ14191 1432 aaPredicted RBP eCLIP21.53■■□□□ 1.04
CCDC142-202ENST00000393965 CSRNP3Q8WYN3 585 aa21.47■■□□□ 1.03
CCDC142-202ENST00000393965 CEP162Q5TB80 1403 aa21.44■■□□□ 1.02
CCDC142-202ENST00000393965 UBTFP17480 764 aaKnown RBP21.42■■□□□ 1.02
CCDC142-202ENST00000393965 TNIKQ9UKE5 1360 aa21.33■■□□□ 1
CCDC142-202ENST00000393965 RANGAP1P46060 587 aaPredicted RBP21.29■■□□□ 1
CCDC142-202ENST00000393965 EEA1Q15075 1411 aa21.28■■□□□ 1
CCDC142-202ENST00000393965 GOLGA3Q08378 1498 aa21.26■□□□□ 0.99
CCDC142-202ENST00000393965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.26■□□□□ 0.99
CCDC142-202ENST00000393965 NCAPD3P42695 1498 aa21.24■□□□□ 0.99
CCDC142-202ENST00000393965 RAPGEF2Q9Y4G8 1499 aa21.2■□□□□ 0.98
CCDC142-202ENST00000393965 HMGXB3Q12766 1538 aa21.2■□□□□ 0.98
CCDC142-202ENST00000393965 TOP2BQ02880 1626 aa21.19■□□□□ 0.98
CCDC142-202ENST00000393965 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
CCDC142-202ENST00000393965 KIF21BO75037 1637 aa21.14■□□□□ 0.97
CCDC142-202ENST00000393965 CUX1P39880 1505 aa21.13■□□□□ 0.97
CCDC142-202ENST00000393965 CCER1Q8TC90 406 aaPredicted RBP21.12■□□□□ 0.97
CCDC142-202ENST00000393965 BIVM-ERCC5R4GMW8 1640 aa21.12■□□□□ 0.97
CCDC142-202ENST00000393965 ZEB1P37275 1124 aaPredicted RBP21.08■□□□□ 0.96
CCDC142-202ENST00000393965 CLIP1P30622 1438 aa21.06■□□□□ 0.96
CCDC142-202ENST00000393965 CFTRP13569 1480 aa21.04■□□□□ 0.96
CCDC142-202ENST00000393965 SCAF1Q9H7N4 1312 aaKnown RBP21■□□□□ 0.95
CCDC142-202ENST00000393965 CC2D2AQ9P2K1 1620 aa20.99■□□□□ 0.95
CCDC142-202ENST00000393965 YTHDC1Q96MU7 727 aaKnown RBP20.93■□□□□ 0.94
CCDC142-202ENST00000393965 PRXQ9BXM0 1461 aa20.91■□□□□ 0.94
CCDC142-202ENST00000393965 VPS8Q8N3P4 1428 aa20.9■□□□□ 0.94
CCDC142-202ENST00000393965 HNRNPUL2Q1KMD3 747 aaKnown RBP20.89■□□□□ 0.93
CCDC142-202ENST00000393965 PRDM2Q13029 1718 aa20.87■□□□□ 0.93
CCDC142-202ENST00000393965 DNAJC5BQ9UF47 199 aa20.87■□□□□ 0.93
CCDC142-202ENST00000393965 CADPSQ9ULU8 1353 aa20.86■□□□□ 0.93
CCDC142-202ENST00000393965 KIF27Q86VH2 1401 aa20.83■□□□□ 0.93
CCDC142-202ENST00000393965 ARAP1Q96P48 1450 aa20.82■□□□□ 0.92
CCDC142-202ENST00000393965 NESP48681 1621 aa20.81■□□□□ 0.92
CCDC142-202ENST00000393965 ERICH3Q5RHP9 1530 aa20.8■□□□□ 0.92
CCDC142-202ENST00000393965 CUX2O14529 1486 aa20.79■□□□□ 0.92
CCDC142-202ENST00000393965 FGD5Q6ZNL6 1462 aa20.77■□□□□ 0.92
CCDC142-202ENST00000393965 KANK4Q5T7N3 995 aaPredicted RBP20.76■□□□□ 0.91
CCDC142-202ENST00000393965 APLP2Q06481 763 aa20.74■□□□□ 0.91
CCDC142-202ENST00000393965 NEUROD1Q13562 356 aa20.72■□□□□ 0.91
CCDC142-202ENST00000393965 IGF1RP08069 1367 aa20.71■□□□□ 0.91
CCDC142-202ENST00000393965 FANCD2Q9BXW9 1451 aa20.7■□□□□ 0.9
CCDC142-202ENST00000393965 RAD54L2Q9Y4B4 1467 aa20.68■□□□□ 0.9
CCDC142-202ENST00000393965 DIEXFQ68CQ4 756 aaKnown RBP20.67■□□□□ 0.9
CCDC142-202ENST00000393965 ARHGAP35Q9NRY4 1499 aa20.67■□□□□ 0.9
CCDC142-202ENST00000393965 GTF3C3Q9Y5Q9 886 aa20.66■□□□□ 0.9
CCDC142-202ENST00000393965 CARMIL1Q5VZK9 1371 aa20.59■□□□□ 0.89
CCDC142-202ENST00000393965 P3H3Q8IVL6 736 aa20.59■□□□□ 0.89
CCDC142-202ENST00000393965 TOPBP1Q92547 1522 aa20.55■□□□□ 0.88
CCDC142-202ENST00000393965 POLA1P09884 1462 aaPredicted RBP20.55■□□□□ 0.88
CCDC142-202ENST00000393965 ACIN1Q9UKV3 1341 aaKnown RBP20.53■□□□□ 0.88
CCDC142-202ENST00000393965 DNMBPQ6XZF7 1577 aa20.52■□□□□ 0.88
CCDC142-202ENST00000393965 URB2Q14146 1524 aaKnown RBP20.48■□□□□ 0.87
CCDC142-202ENST00000393965 ITGAEP38570 1179 aa20.48■□□□□ 0.87
CCDC142-202ENST00000393965 CENPBP07199 599 aaPredicted RBP20.46■□□□□ 0.87
CCDC142-202ENST00000393965 ABCA10Q8WWZ4 1543 aa20.43■□□□□ 0.86
CCDC142-202ENST00000393965 ATP1B4Q9UN42 357 aaPredicted RBP20.42■□□□□ 0.86
CCDC142-202ENST00000393965 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
CCDC142-202ENST00000393965 KIF21AQ7Z4S6 1674 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms