RNA–Protein interactions for RNA: ENST00000497232.5

CCDC142-209, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-209ENST00000497232 NISCHQ9Y2I1 1504 aa26.08■■□□□ 1.77
CCDC142-209ENST00000497232 CCDC180Q9P1Z9 1646 aa22.96■■□□□ 1.27
CCDC142-209ENST00000497232 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
CCDC142-209ENST00000497232 ABCC9O60706 1549 aa22.01■■□□□ 1.11
CCDC142-209ENST00000497232 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.08
CCDC142-209ENST00000497232 CHIC1Q5VXU3 224 aa21.66■■□□□ 1.06
CCDC142-209ENST00000497232 DCAF1Q9Y4B6 1507 aa21.63■■□□□ 1.05
CCDC142-209ENST00000497232 MYO15BQ96JP2 1530 aa21.57■■□□□ 1.04
CCDC142-209ENST00000497232 NACADO15069 1562 aa21.48■■□□□ 1.03
CCDC142-209ENST00000497232 DCAF8L2P0C7V8 631 aa21.4■■□□□ 1.02
CCDC142-209ENST00000497232 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
CCDC142-209ENST00000497232 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
CCDC142-209ENST00000497232 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
CCDC142-209ENST00000497232 BICRAQ9NZM4 1560 aa20.83■□□□□ 0.92
CCDC142-209ENST00000497232 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
CCDC142-209ENST00000497232 PABPN1Q86U42 306 aaKnown RBP eCLIP20.65■□□□□ 0.9
CCDC142-209ENST00000497232 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
CCDC142-209ENST00000497232 EIF4G1Q04637 1599 aaKnown RBP20.17■□□□□ 0.82
CCDC142-209ENST00000497232 BAZ1AQ9NRL2 1556 aaPredicted RBP20.13■□□□□ 0.81
CCDC142-209ENST00000497232 SMARCA4P51532 1647 aa20.12■□□□□ 0.81
CCDC142-209ENST00000497232 MROH2BQ7Z745 1585 aa20.12■□□□□ 0.81
CCDC142-209ENST00000497232 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
CCDC142-209ENST00000497232 PEG3Q9GZU2 1588 aa19.98■□□□□ 0.79
CCDC142-209ENST00000497232 CC2D2AQ9P2K1 1620 aa19.96■□□□□ 0.79
CCDC142-209ENST00000497232 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
CCDC142-209ENST00000497232 ATAD2BQ9ULI0 1458 aa19.92■□□□□ 0.78
CCDC142-209ENST00000497232 WIZO95785 1651 aa19.89■□□□□ 0.77
CCDC142-209ENST00000497232 NCAPD3P42695 1498 aa19.86■□□□□ 0.77
CCDC142-209ENST00000497232 SMARCA2P51531 1590 aa19.86■□□□□ 0.77
CCDC142-209ENST00000497232 HMGXB3Q12766 1538 aa19.77■□□□□ 0.76
CCDC142-209ENST00000497232 SUPT5HO00267 1087 aaKnown RBP19.7■□□□□ 0.74
CCDC142-209ENST00000497232 BAZ1BQ9UIG0 1483 aaKnown RBP19.7■□□□□ 0.74
CCDC142-209ENST00000497232 TOP2AP11388 1531 aaKnown RBP19.7■□□□□ 0.74
CCDC142-209ENST00000497232 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
CCDC142-209ENST00000497232 CFTRP13569 1480 aa19.28■□□□□ 0.68
CCDC142-209ENST00000497232 CADPSQ9ULU8 1353 aa19.27■□□□□ 0.68
CCDC142-209ENST00000497232 NESP48681 1621 aa19.23■□□□□ 0.67
CCDC142-209ENST00000497232 LAMC3Q9Y6N6 1575 aa19.21■□□□□ 0.67
CCDC142-209ENST00000497232 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
CCDC142-209ENST00000497232 PRDM2Q13029 1718 aa19.1■□□□□ 0.65
CCDC142-209ENST00000497232 PDS5BQ9NTI5 1447 aa19.02■□□□□ 0.64
CCDC142-209ENST00000497232 FANCD2Q9BXW9 1451 aa19.02■□□□□ 0.63
CCDC142-209ENST00000497232 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
CCDC142-209ENST00000497232 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
CCDC142-209ENST00000497232 CEP164Q9UPV0 1460 aa18.92■□□□□ 0.62
CCDC142-209ENST00000497232 ABCC8Q09428 1581 aa18.87■□□□□ 0.61
CCDC142-209ENST00000497232 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
CCDC142-209ENST00000497232 THOC2Q8NI27 1593 aaKnown RBP18.85■□□□□ 0.61
CCDC142-209ENST00000497232 ERCC6Q03468 1493 aa18.85■□□□□ 0.61
CCDC142-209ENST00000497232 CUX1P39880 1505 aa18.84■□□□□ 0.61
CCDC142-209ENST00000497232 MRC2Q9UBG0 1479 aa18.84■□□□□ 0.61
CCDC142-209ENST00000497232 WRNQ14191 1432 aaPredicted RBP eCLIP18.82■□□□□ 0.6
CCDC142-209ENST00000497232 WDR62O43379 1518 aa18.81■□□□□ 0.6
CCDC142-209ENST00000497232 SYNJ1O43426 1573 aa18.8■□□□□ 0.6
CCDC142-209ENST00000497232 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
CCDC142-209ENST00000497232 DNMBPQ6XZF7 1577 aa18.79■□□□□ 0.6
CCDC142-209ENST00000497232 TOP2BQ02880 1626 aa18.77■□□□□ 0.6
CCDC142-209ENST00000497232 BIVM-ERCC5R4GMW8 1640 aa18.77■□□□□ 0.6
CCDC142-209ENST00000497232 CUX2O14529 1486 aa18.67■□□□□ 0.58
CCDC142-209ENST00000497232 POLA1P09884 1462 aaPredicted RBP18.67■□□□□ 0.58
CCDC142-209ENST00000497232 FGD5Q6ZNL6 1462 aa18.66■□□□□ 0.58
CCDC142-209ENST00000497232 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
CCDC142-209ENST00000497232 TRIM41Q8WV44 630 aa18.58■□□□□ 0.56
CCDC142-209ENST00000497232 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
CCDC142-209ENST00000497232 SOGA1O94964 1423 aa18.56■□□□□ 0.56
CCDC142-209ENST00000497232 IFT140Q96RY7 1462 aa18.54■□□□□ 0.56
CCDC142-209ENST00000497232 ABCA10Q8WWZ4 1543 aa18.54■□□□□ 0.56
CCDC142-209ENST00000497232 WDR97A6NE52 1622 aa18.53■□□□□ 0.56
CCDC142-209ENST00000497232 ZNF608Q9ULD9 1512 aaPredicted RBP18.47■□□□□ 0.55
CCDC142-209ENST00000497232 RUSC2Q8N2Y8 1516 aa18.44■□□□□ 0.54
CCDC142-209ENST00000497232 ABCA5Q8WWZ7 1642 aa18.43■□□□□ 0.54
CCDC142-209ENST00000497232 TDRD9Q8NDG6 1382 aaKnown RBP18.41■□□□□ 0.54
CCDC142-209ENST00000497232 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.54
CCDC142-209ENST00000497232 EIF4G3O43432 1585 aaKnown RBP18.38■□□□□ 0.53
CCDC142-209ENST00000497232 KIF27Q86VH2 1401 aa18.36■□□□□ 0.53
CCDC142-209ENST00000497232 GAPVD1Q14C86 1478 aa18.35■□□□□ 0.53
CCDC142-209ENST00000497232 IGF1RP08069 1367 aa18.32■□□□□ 0.52
CCDC142-209ENST00000497232 EEA1Q15075 1411 aa18.31■□□□□ 0.52
CCDC142-209ENST00000497232 ERICH3Q5RHP9 1530 aa18.29■□□□□ 0.52
CCDC142-209ENST00000497232 GRIN2BQ13224 1484 aa18.29■□□□□ 0.52
CCDC142-209ENST00000497232 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
CCDC142-209ENST00000497232 CSRNP3Q8WYN3 585 aa18.23■□□□□ 0.51
CCDC142-209ENST00000497232 PRXQ9BXM0 1461 aa18.22■□□□□ 0.51
CCDC142-209ENST00000497232 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
CCDC142-209ENST00000497232 MAGI1Q96QZ7 1491 aaPredicted RBP18.2■□□□□ 0.5
CCDC142-209ENST00000497232 ADAMTS12P58397 1594 aa18.2■□□□□ 0.5
CCDC142-209ENST00000497232 FAM9AQ8IZU1 332 aaPredicted RBP18.18■□□□□ 0.5
CCDC142-209ENST00000497232 CUL7Q14999 1698 aa18.18■□□□□ 0.5
CCDC142-209ENST00000497232 FHAD1B1AJZ9 1412 aa18.16■□□□□ 0.5
CCDC142-209ENST00000497232 CARMIL1Q5VZK9 1371 aa18.16■□□□□ 0.5
CCDC142-209ENST00000497232 SYNJ2O15056 1496 aa18.14■□□□□ 0.49
CCDC142-209ENST00000497232 KIF21BO75037 1637 aa18.12■□□□□ 0.49
CCDC142-209ENST00000497232 RAPGEF2Q9Y4G8 1499 aa18.09■□□□□ 0.49
CCDC142-209ENST00000497232 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
CCDC142-209ENST00000497232 CHD1O14646 1710 aa18.04■□□□□ 0.48
CCDC142-209ENST00000497232 NUP160Q12769 1436 aa18.02■□□□□ 0.48
CCDC142-209ENST00000497232 GOLGA3Q08378 1498 aa18.01■□□□□ 0.47
CCDC142-209ENST00000497232 CHMP7Q8WUX9 453 aaPredicted RBP18■□□□□ 0.47
CCDC142-209ENST00000497232 CEP170Q5SW79 1584 aa18■□□□□ 0.47
CCDC142-209ENST00000497232 LOC105371045A0A1W2PR82 267 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms