RNA–Protein interactions for RNA: ENST00000422223.6

FREM1-204, Transcript of FRAS1 related extracellular matrix 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FREM1, Length 10,086 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-204ENST00000422223 PELP1Q8IZL8 1130 aaKnown RBP15.1■□□□□ 0.01
FREM1-204ENST00000422223 MYT1Q01538 1121 aa14.46□□□□□ -0.09
FREM1-204ENST00000422223 ERICH6Q7L0X2 663 aa14.39□□□□□ -0.11
FREM1-204ENST00000422223 CCER1Q8TC90 406 aaPredicted RBP14.36□□□□□ -0.11
FREM1-204ENST00000422223 DCAF8L2P0C7V8 631 aa14.11□□□□□ -0.15
FREM1-204ENST00000422223 YTHDC1Q96MU7 727 aaKnown RBP13.97□□□□□ -0.17
FREM1-204ENST00000422223 CENPBP07199 599 aaPredicted RBP13.9□□□□□ -0.18
FREM1-204ENST00000422223 APLP2Q06481 763 aa13.73□□□□□ -0.21
FREM1-204ENST00000422223 TTBK1Q5TCY1 1321 aaPredicted RBP13.72□□□□□ -0.21
FREM1-204ENST00000422223 NEFLP07196 543 aa13.7□□□□□ -0.22
FREM1-204ENST00000422223 FAM9AQ8IZU1 332 aaPredicted RBP13.63□□□□□ -0.23
FREM1-204ENST00000422223 DAXXQ9UER7 740 aaPredicted RBP13.62□□□□□ -0.23
FREM1-204ENST00000422223 ZEB1P37275 1124 aaPredicted RBP13.52□□□□□ -0.25
FREM1-204ENST00000422223 SUPT5HO00267 1087 aaKnown RBP13.51□□□□□ -0.25
FREM1-204ENST00000422223 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
FREM1-204ENST00000422223 RTL5Q5HYW3 569 aaPredicted RBP13.28□□□□□ -0.28
FREM1-204ENST00000422223 PCGF6Q9BYE7 350 aa13.25□□□□□ -0.29
FREM1-204ENST00000422223 ZNF316A6NFI3 1004 aaPredicted RBP13.22□□□□□ -0.29
FREM1-204ENST00000422223 GLIPR1L2Q4G1C9 344 aa12.99□□□□□ -0.33
FREM1-204ENST00000422223 CLSPNQ9HAW4 1339 aa12.95□□□□□ -0.34
FREM1-204ENST00000422223 SHROOM4Q9ULL8 1493 aa12.92□□□□□ -0.34
FREM1-204ENST00000422223 ATP1B4Q9UN42 357 aaPredicted RBP12.88□□□□□ -0.35
FREM1-204ENST00000422223 ANP32BQ92688 251 aaKnown RBP12.74□□□□□ -0.37
FREM1-204ENST00000422223 RANGAP1P46060 587 aaPredicted RBP12.73□□□□□ -0.37
FREM1-204ENST00000422223 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
FREM1-204ENST00000422223 POLR3GLQ9BT43 218 aa12.7□□□□□ -0.38
FREM1-204ENST00000422223 EIF5BO60841 1220 aaKnown RBP12.69□□□□□ -0.38
FREM1-204ENST00000422223 UBTFP17480 764 aaKnown RBP12.65□□□□□ -0.38
FREM1-204ENST00000422223 CDK11AQ9UQ88 783 aaPredicted RBP12.65□□□□□ -0.38
FREM1-204ENST00000422223 TRIM41Q8WV44 630 aa12.59□□□□□ -0.39
FREM1-204ENST00000422223 SLC4A1APQ9BWU0 796 aaKnown RBP12.59□□□□□ -0.39
FREM1-204ENST00000422223 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
FREM1-204ENST00000422223 ANP32AP39687 249 aaKnown RBP12.55□□□□□ -0.4
FREM1-204ENST00000422223 TRIM26Q12899 539 aaPredicted RBP12.55□□□□□ -0.4
FREM1-204ENST00000422223 HRCP23327 699 aa12.55□□□□□ -0.4
FREM1-204ENST00000422223 TNNT2P45379 298 aaPredicted RBP12.48□□□□□ -0.41
FREM1-204ENST00000422223 NEFMP07197 916 aa12.45□□□□□ -0.42
FREM1-204ENST00000422223 CNGB1Q14028 1251 aaPredicted RBP12.44□□□□□ -0.42
FREM1-204ENST00000422223 CANXP27824 592 aaKnown RBP12.42□□□□□ -0.42
FREM1-204ENST00000422223 DIEXFQ68CQ4 756 aaKnown RBP12.41□□□□□ -0.42
FREM1-204ENST00000422223 CDK11BP21127 795 aaKnown RBP12.41□□□□□ -0.42
FREM1-204ENST00000422223 HSP90AA1P07900 732 aaKnown RBP12.4□□□□□ -0.42
FREM1-204ENST00000422223 NISCHQ9Y2I1 1504 aa12.37□□□□□ -0.43
FREM1-204ENST00000422223 UPF2Q9HAU5 1272 aaKnown RBP12.34□□□□□ -0.43
FREM1-204ENST00000422223 ITGAEP38570 1179 aa12.32□□□□□ -0.44
FREM1-204ENST00000422223 BCANQ96GW7 911 aa12.3□□□□□ -0.44
FREM1-204ENST00000422223 ANP32CO43423 234 aa12.3□□□□□ -0.44
FREM1-204ENST00000422223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.29□□□□□ -0.44
FREM1-204ENST00000422223 HNRNPUL2Q1KMD3 747 aaKnown RBP12.29□□□□□ -0.44
FREM1-204ENST00000422223 GTF3C3Q9Y5Q9 886 aa12.28□□□□□ -0.44
FREM1-204ENST00000422223 SLC24A1O60721 1099 aa12.27□□□□□ -0.45
FREM1-204ENST00000422223 TRIM44Q96DX7 344 aaPredicted RBP12.27□□□□□ -0.45
FREM1-204ENST00000422223 CHIC1Q5VXU3 224 aa12.27□□□□□ -0.45
FREM1-204ENST00000422223 PPARGC1BQ86YN6 1023 aaKnown RBP12.24□□□□□ -0.45
FREM1-204ENST00000422223 NPM2Q86SE8 214 aaKnown RBP12.23□□□□□ -0.45
FREM1-204ENST00000422223 BCL11AQ9H165 835 aa12.22□□□□□ -0.45
FREM1-204ENST00000422223 ANP32EQ9BTT0 268 aa12.17□□□□□ -0.46
FREM1-204ENST00000422223 NCLP19338 710 aaKnown RBP12.13□□□□□ -0.47
FREM1-204ENST00000422223 NBR1Q14596 966 aa12.07□□□□□ -0.48
FREM1-204ENST00000422223 TRIM52Q96A61 297 aa12.04□□□□□ -0.48
FREM1-204ENST00000422223 ARXQ96QS3 562 aa12.04□□□□□ -0.48
FREM1-204ENST00000422223 GOLGA6L22H0YM25 854 aa12.02□□□□□ -0.49
FREM1-204ENST00000422223 DNTTIP2Q5QJE6 756 aaKnown RBP12.01□□□□□ -0.49
FREM1-204ENST00000422223 ZRSR1Q15695 479 aaKnown RBP12.01□□□□□ -0.49
FREM1-204ENST00000422223 ERICH6BQ5W0A0 696 aa12.01□□□□□ -0.49
FREM1-204ENST00000422223 GOLGA6L2Q8N9W4 650 aaPredicted RBP12□□□□□ -0.49
FREM1-204ENST00000422223 BECN1Q14457 450 aa12□□□□□ -0.49
FREM1-204ENST00000422223 DDRGK1Q96HY6 314 aa11.99□□□□□ -0.49
FREM1-204ENST00000422223 FAM50AQ14320 339 aaKnown RBP11.99□□□□□ -0.49
FREM1-204ENST00000422223 ACIN1Q9UKV3 1341 aaKnown RBP11.99□□□□□ -0.49
FREM1-204ENST00000422223 PTMAP06454 111 aaKnown RBP11.99□□□□□ -0.49
FREM1-204ENST00000422223 NEUROD1Q13562 356 aa11.99□□□□□ -0.49
FREM1-204ENST00000422223 GOLGA6L6A8MZA4 724 aa11.97□□□□□ -0.49
FREM1-204ENST00000422223 NAP1L5Q96NT1 182 aaPredicted RBP11.94□□□□□ -0.5
FREM1-204ENST00000422223 ZNF326Q5BKZ1 582 aaKnown RBP11.94□□□□□ -0.5
FREM1-204ENST00000422223 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
FREM1-204ENST00000422223 FKBP8Q14318 412 aa11.91□□□□□ -0.5
FREM1-204ENST00000422223 NRDCO43847 1150 aa11.9□□□□□ -0.5
FREM1-204ENST00000422223 CHAF1AQ13111 956 aaPredicted RBP11.9□□□□□ -0.5
FREM1-204ENST00000422223 L1TD1Q5T7N2 865 aaKnown RBP11.89□□□□□ -0.51
FREM1-204ENST00000422223 CCDC136Q96JN2 1154 aa11.89□□□□□ -0.51
FREM1-204ENST00000422223 CALRP27797 417 aaKnown RBP11.85□□□□□ -0.51
FREM1-204ENST00000422223 CASC1Q6TDU7 716 aa11.81□□□□□ -0.52
FREM1-204ENST00000422223 TNNT3P45378 269 aaPredicted RBP11.81□□□□□ -0.52
FREM1-204ENST00000422223 AMER1Q5JTC6 1135 aaPredicted RBP11.8□□□□□ -0.52
FREM1-204ENST00000422223 PPM1GO15355 546 aaPredicted RBP11.77□□□□□ -0.53
FREM1-204ENST00000422223 HNRNPUQ00839 825 aaKnown RBP eCLIP11.75□□□□□ -0.536e-7■■■■□ 23
FREM1-204ENST00000422223 MSNP26038 577 aaKnown RBP11.75□□□□□ -0.53
FREM1-204ENST00000422223 USP35Q9P2H5 1018 aa11.74□□□□□ -0.53
FREM1-204ENST00000422223 KIAA2012Q0VF49 1180 aa11.71□□□□□ -0.53
FREM1-204ENST00000422223 WDR43Q15061 677 aaKnown RBP eCLIP11.71□□□□□ -0.54
FREM1-204ENST00000422223 SETQ01105 290 aaPredicted RBP11.7□□□□□ -0.54
FREM1-204ENST00000422223 LOC105371045A0A1W2PR82 267 aa11.7□□□□□ -0.54
FREM1-204ENST00000422223 TULP1O00294 542 aaPredicted RBP11.69□□□□□ -0.54
FREM1-204ENST00000422223 NOC3LQ8WTT2 800 aaKnown RBP11.69□□□□□ -0.54
FREM1-204ENST00000422223 GOLGA6L1Q8N7Z2 621 aa11.68□□□□□ -0.54
FREM1-204ENST00000422223 TMC1Q8TDI8 760 aa11.68□□□□□ -0.54
FREM1-204ENST00000422223 PLCB2Q00722 1185 aa11.66□□□□□ -0.54
FREM1-204ENST00000422223 PTMSP20962 102 aa11.66□□□□□ -0.54
FREM1-204ENST00000422223 FAM9BQ8IZU0 186 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms