RNA–Protein interactions for RNA: ENST00000489764.1

SLC6A9-208, Transcript of solute carrier family 6 member 9, humanhuman

TSL 3

Gene SLC6A9, Length 930 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9-208ENST00000489764 NISCHQ9Y2I1 1504 aa46.43■■■■■ 5.02
SLC6A9-208ENST00000489764 ABCC9O60706 1549 aa41.55■■■■■ 4.24
SLC6A9-208ENST00000489764 CCDC180Q9P1Z9 1646 aa41.47■■■■■ 4.23
SLC6A9-208ENST00000489764 RB1CC1Q8TDY2 1594 aa39.5■■■■□ 3.91
SLC6A9-208ENST00000489764 NACADO15069 1562 aa39.29■■■■□ 3.88
SLC6A9-208ENST00000489764 DCAF8L2P0C7V8 631 aa39.27■■■■□ 3.88
SLC6A9-208ENST00000489764 DNAJC5BQ9UF47 199 aa39.06■■■■□ 3.84
SLC6A9-208ENST00000489764 PABPN1Q86U42 306 aaKnown RBP eCLIP38.81■■■■□ 3.8
SLC6A9-208ENST00000489764 MYO15BQ96JP2 1530 aa38.79■■■■□ 3.8
SLC6A9-208ENST00000489764 UNC13AQ9UPW8 1703 aa38.54■■■■□ 3.76
SLC6A9-208ENST00000489764 ZCCHC6Q5VYS8 1495 aaKnown RBP38.46■■■■□ 3.75
SLC6A9-208ENST00000489764 BICRAQ9NZM4 1560 aa38.4■■■■□ 3.74
SLC6A9-208ENST00000489764 DCAF1Q9Y4B6 1507 aa38.33■■■■□ 3.73
SLC6A9-208ENST00000489764 SCRIBQ14160 1630 aa37.87■■■■□ 3.65
SLC6A9-208ENST00000489764 SHROOM4Q9ULL8 1493 aa37.83■■■■□ 3.65
SLC6A9-208ENST00000489764 CC2D2AQ9P2K1 1620 aa37.49■■■■□ 3.59
SLC6A9-208ENST00000489764 EIF4G1Q04637 1599 aaKnown RBP37.43■■■■□ 3.58
SLC6A9-208ENST00000489764 CECR2Q9BXF3 1484 aa37.41■■■■□ 3.58
SLC6A9-208ENST00000489764 NCAPD3P42695 1498 aa36.35■■■■□ 3.41
SLC6A9-208ENST00000489764 ATAD2BQ9ULI0 1458 aa36.24■■■■□ 3.39
SLC6A9-208ENST00000489764 SMARCA4P51532 1647 aa36.13■■■■□ 3.37
SLC6A9-208ENST00000489764 SMARCA2P51531 1590 aa36.06■■■■□ 3.36
SLC6A9-208ENST00000489764 HMGXB3Q12766 1538 aa35.98■■■■□ 3.35
SLC6A9-208ENST00000489764 BAZ1AQ9NRL2 1556 aaPredicted RBP35.98■■■■□ 3.35
SLC6A9-208ENST00000489764 BAZ1BQ9UIG0 1483 aaKnown RBP35.84■■■■□ 3.33
SLC6A9-208ENST00000489764 ERCC6Q03468 1493 aa35.82■■■■□ 3.32
SLC6A9-208ENST00000489764 PEG3Q9GZU2 1588 aa35.8■■■■□ 3.32
SLC6A9-208ENST00000489764 MROH2BQ7Z745 1585 aa35.79■■■■□ 3.32
SLC6A9-208ENST00000489764 DNAJC5Q9H3Z4 198 aa35.76■■■■□ 3.32
SLC6A9-208ENST00000489764 NESP48681 1621 aa35.73■■■■□ 3.31
SLC6A9-208ENST00000489764 CUX2O14529 1486 aa35.73■■■■□ 3.31
SLC6A9-208ENST00000489764 LAMC3Q9Y6N6 1575 aa35.41■■■■□ 3.26
SLC6A9-208ENST00000489764 WIZO95785 1651 aa35.31■■■■□ 3.24
SLC6A9-208ENST00000489764 PDS5BQ9NTI5 1447 aa35.28■■■■□ 3.24
SLC6A9-208ENST00000489764 CADPSQ9ULU8 1353 aa35.26■■■■□ 3.24
SLC6A9-208ENST00000489764 THOC2Q8NI27 1593 aaKnown RBP35.25■■■■□ 3.23
SLC6A9-208ENST00000489764 KIF21AQ7Z4S6 1674 aa35.14■■■■□ 3.22
SLC6A9-208ENST00000489764 RSF1Q96T23 1441 aaPredicted RBP35.12■■■■□ 3.21
SLC6A9-208ENST00000489764 MRC2Q9UBG0 1479 aa34.93■■■■□ 3.18
SLC6A9-208ENST00000489764 TOP2AP11388 1531 aaKnown RBP34.86■■■■□ 3.17
SLC6A9-208ENST00000489764 CFTRP13569 1480 aa34.84■■■■□ 3.17
SLC6A9-208ENST00000489764 WDR62O43379 1518 aa34.82■■■■□ 3.16
SLC6A9-208ENST00000489764 FANCD2Q9BXW9 1451 aa34.81■■■■□ 3.16
SLC6A9-208ENST00000489764 CEP164Q9UPV0 1460 aa34.8■■■■□ 3.16
SLC6A9-208ENST00000489764 CCDC88BA6NC98 1476 aa34.56■■■■□ 3.12
SLC6A9-208ENST00000489764 URB2Q14146 1524 aaKnown RBP34.52■■■■□ 3.12
SLC6A9-208ENST00000489764 PRDM2Q13029 1718 aa34.28■■■■□ 3.08
SLC6A9-208ENST00000489764 OSCARQ8IYS5 282 aa34.24■■■■□ 3.07
SLC6A9-208ENST00000489764 TRIM41Q8WV44 630 aa34.19■■■■□ 3.06
SLC6A9-208ENST00000489764 TOPBP1Q92547 1522 aa34.15■■■■□ 3.06
SLC6A9-208ENST00000489764 IFT140Q96RY7 1462 aa34.13■■■■□ 3.05
SLC6A9-208ENST00000489764 ZNF608Q9ULD9 1512 aaPredicted RBP34.1■■■■□ 3.05
SLC6A9-208ENST00000489764 ABCC8Q09428 1581 aa34.07■■■■□ 3.05
SLC6A9-208ENST00000489764 DNMBPQ6XZF7 1577 aa33.98■■■■□ 3.03
SLC6A9-208ENST00000489764 AQRO60306 1485 aaKnown RBP eCLIP33.83■■■■□ 3.01
SLC6A9-208ENST00000489764 POLA1P09884 1462 aaPredicted RBP33.82■■■■□ 3
SLC6A9-208ENST00000489764 TARBP1Q13395 1621 aaKnown RBP33.81■■■■□ 3
SLC6A9-208ENST00000489764 EIF4G3O43432 1585 aaKnown RBP33.8■■■■□ 3
SLC6A9-208ENST00000489764 RAD54L2Q9Y4B4 1467 aa33.74■■■□□ 2.99
SLC6A9-208ENST00000489764 SOGA1O94964 1423 aa33.72■■■□□ 2.99
SLC6A9-208ENST00000489764 SUPT5HO00267 1087 aaKnown RBP33.68■■■□□ 2.98
SLC6A9-208ENST00000489764 TDRD9Q8NDG6 1382 aaKnown RBP33.66■■■□□ 2.98
SLC6A9-208ENST00000489764 RIMBP3CA6NJZ7 1639 aa33.64■■■□□ 2.98
SLC6A9-208ENST00000489764 RIMBP3BA6NNM3 1639 aa33.64■■■□□ 2.98
SLC6A9-208ENST00000489764 RIMBP3Q9UFD9 1639 aa33.64■■■□□ 2.98
SLC6A9-208ENST00000489764 FBLN2P98095 1184 aa33.61■■■□□ 2.97
SLC6A9-208ENST00000489764 CUX1P39880 1505 aa33.6■■■□□ 2.97
SLC6A9-208ENST00000489764 FGD5Q6ZNL6 1462 aa33.6■■■□□ 2.97
SLC6A9-208ENST00000489764 ARHGEF11O15085 1522 aa33.57■■■□□ 2.96
SLC6A9-208ENST00000489764 CHD1O14646 1710 aa33.5■■■□□ 2.95
SLC6A9-208ENST00000489764 CYB5RLQ6IPT4 315 aa33.45■■■□□ 2.95
SLC6A9-208ENST00000489764 SNAPC4Q5SXM2 1469 aa33.43■■■□□ 2.94
SLC6A9-208ENST00000489764 WDR97A6NE52 1622 aa33.41■■■□□ 2.94
SLC6A9-208ENST00000489764 CHMP7Q8WUX9 453 aaPredicted RBP33.38■■■□□ 2.93
SLC6A9-208ENST00000489764 GRIN2BQ13224 1484 aa33.36■■■□□ 2.93
SLC6A9-208ENST00000489764 MAGI1Q96QZ7 1491 aaPredicted RBP33.32■■■□□ 2.92
SLC6A9-208ENST00000489764 GAPVD1Q14C86 1478 aa33.27■■■□□ 2.92
SLC6A9-208ENST00000489764 ARAP1Q96P48 1450 aa33.27■■■□□ 2.92
SLC6A9-208ENST00000489764 ABCA10Q8WWZ4 1543 aa33.24■■■□□ 2.91
SLC6A9-208ENST00000489764 SYNJ2O15056 1496 aa33.23■■■□□ 2.91
SLC6A9-208ENST00000489764 CLASP1Q7Z460 1538 aa33.2■■■□□ 2.91
SLC6A9-208ENST00000489764 SYNJ1O43426 1573 aa33.16■■■□□ 2.9
SLC6A9-208ENST00000489764 WRNQ14191 1432 aaPredicted RBP eCLIP33.15■■■□□ 2.9
SLC6A9-208ENST00000489764 ABCA5Q8WWZ7 1642 aa33.11■■■□□ 2.89
SLC6A9-208ENST00000489764 PBRM1Q86U86 1689 aa33.1■■■□□ 2.89
SLC6A9-208ENST00000489764 TOP2BQ02880 1626 aa33.04■■■□□ 2.88
SLC6A9-208ENST00000489764 TRHP20396 242 aaPredicted RBP33.01■■■□□ 2.87
SLC6A9-208ENST00000489764 BIVM-ERCC5R4GMW8 1640 aa33■■■□□ 2.87
SLC6A9-208ENST00000489764 GRIN2AQ12879 1464 aa32.92■■■□□ 2.86
SLC6A9-208ENST00000489764 FHAD1B1AJZ9 1412 aa32.85■■■□□ 2.85
SLC6A9-208ENST00000489764 ADAMTS12P58397 1594 aa32.85■■■□□ 2.85
SLC6A9-208ENST00000489764 NUP160Q12769 1436 aa32.84■■■□□ 2.85
SLC6A9-208ENST00000489764 ERICH3Q5RHP9 1530 aa32.79■■■□□ 2.84
SLC6A9-208ENST00000489764 CEP170Q5SW79 1584 aa32.78■■■□□ 2.84
SLC6A9-208ENST00000489764 ERCC6L2Q5T890 1561 aa32.74■■■□□ 2.83
SLC6A9-208ENST00000489764 SHROOM2Q13796 1616 aa32.6■■■□□ 2.81
SLC6A9-208ENST00000489764 JPH4Q96JJ6 628 aa32.6■■■□□ 2.81
SLC6A9-208ENST00000489764 IGF1RP08069 1367 aa32.53■■■□□ 2.8
SLC6A9-208ENST00000489764 PRG4Q92954 1404 aaPredicted RBP32.52■■■□□ 2.8
SLC6A9-208ENST00000489764 KIF27Q86VH2 1401 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms