Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 AVL9-204ENST00000459629 7937 ntTSL 216.18■□□□□ 0.182e-6■■■□□ 15.7
AARSP49588 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.172e-6■■■□□ 15.7
AARSP49588 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.172e-6■■■□□ 15.7
AARSP49588 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.132e-6■■■□□ 15.7
AARSP49588 RAB11FIP1-205ENST00000523182 2329 ntTSL 1 (best)15.78■□□□□ 0.122e-6■■■□□ 15.7
AARSP49588 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.73■□□□□ 0.112e-6■■■□□ 15.7
AARSP49588 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.3■□□□□ 0.042e-6■■■□□ 15.7
AARSP49588 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.032e-6■■■□□ 15.7
AARSP49588 WDR55-205ENST00000520764 1696 ntTSL 215.1■□□□□ 0.012e-6■■■□□ 15.7
AARSP49588 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.012e-6■■■□□ 15.7
AARSP49588 TCOF1-215ENST00000515516 661 ntTSL 514.8□□□□□ -0.042e-6■■■□□ 15.7
AARSP49588 WDR55-203ENST00000506393 2477 ntTSL 214.44□□□□□ -0.12e-6■■■□□ 15.7
AARSP49588 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.12e-6■■■□□ 15.7
AARSP49588 TCOF1-214ENST00000515035 5240 ntTSL 214.13□□□□□ -0.152e-6■■■□□ 15.7
AARSP49588 TLN1-207ENST00000489255 798 ntTSL 214.12□□□□□ -0.152e-6■■■□□ 15.7
AARSP49588 TBRG4-209ENST00000478532 945 ntTSL 513.97□□□□□ -0.172e-6■■■□□ 15.7
AARSP49588 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.69□□□□□ -0.222e-6■■■□□ 15.7
AARSP49588 UTP3-201ENST00000254803 2073 ntAPPRIS P1 BASIC13.43□□□□□ -0.262e-6■■■□□ 15.7
AARSP49588 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.282e-6■■■□□ 15.7
AARSP49588 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.282e-6■■■□□ 15.7
AARSP49588 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.392e-6■■■□□ 15.7
AARSP49588 RBM6-213ENST00000454079 4324 ntTSL 212.58□□□□□ -0.42e-6■■■□□ 15.7
AARSP49588 AVL9-202ENST00000409301 4336 ntTSL 5 BASIC12.31□□□□□ -0.442e-6■■■□□ 15.7
AARSP49588 TCOF1-211ENST00000513346 4646 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.472e-6■■■□□ 15.7
AARSP49588 TBRG4-217ENST00000495973 3409 ntTSL 1 (best)11.92□□□□□ -0.52e-6■■■□□ 15.7
AARSP49588 TCOF1-203ENST00000394269 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.522e-6■■■□□ 15.7
AARSP49588 RAB11FIP1-204ENST00000522774 3078 ntTSL 1 (best)11.76□□□□□ -0.532e-6■■■□□ 15.7
AARSP49588 TCOF1-204ENST00000427724 4272 ntAPPRIS ALT2 TSL 511.12□□□□□ -0.632e-6■■■□□ 15.7
AARSP49588 GSPT1-201ENST00000420576 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.72e-6■■■□□ 15.7
AARSP49588 WDR55-201ENST00000358337 4080 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.712e-6■■■□□ 15.7
AARSP49588 WDR55-204ENST00000511232 3812 ntTSL 210.18□□□□□ -0.782e-6■■■□□ 15.7
AARSP49588 GSPT1-208ENST00000565267 1864 ntTSL 59.85□□□□□ -0.832e-6■■■□□ 15.7
AARSP49588 ANK1-214ENST00000524227 3825 ntTSL 1 (best)9.6□□□□□ -0.872e-6■■■□□ 15.7
AARSP49588 GSPT1-206ENST00000563468 1962 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.912e-6■■■□□ 15.7
AARSP49588 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC8.62□□□□□ -1.032e-6■■■□□ 15.7
AARSP49588 RBM6-216ENST00000478026 480 ntTSL 45.14□□□□□ -1.592e-6■■■□□ 15.7
AARSP49588 GSPT1-205ENST00000562794 501 ntTSL 34.97□□□□□ -1.612e-6■■■□□ 15.7
AARSP49588 RBM6-208ENST00000438912 473 ntTSL 54.58□□□□□ -1.682e-6■■■□□ 15.7
AARSP49588 SNORD82-201ENST00000365530 70 ntBASIC4.45□□□□□ -1.72e-6■■■□□ 15.7
AARSP49588 GSPT1-207ENST00000564790 491 ntTSL 33.81□□□□□ -1.82e-6■■■□□ 15.7
AARSP49588 TMC6-206ENST00000586271 970 ntTSL 220.31■□□□□ 0.841e-6■■■□□ 15.7
AARSP49588 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.111e-6■■■□□ 15.6
AARSP49588 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.292e-6■■■□□ 15.6
AARSP49588 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.98■□□□□ 0.952e-6■■■□□ 15.6
AARSP49588 SRRT-209ENST00000474896 726 ntTSL 316.98■□□□□ 0.312e-6■■■□□ 15.6
AARSP49588 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.062e-6■■■□□ 15.6
AARSP49588 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.163e-6■■■□□ 15.6
AARSP49588 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.483e-6■■■□□ 15.6
AARSP49588 C22orf34-202ENST00000400023 1469 ntTSL 1 (best)17.07■□□□□ 0.321e-6■■■□□ 15.6
AARSP49588 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.43■■■□□ 2.621e-8■■■□□ 15.5
AARSP49588 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.13■■■□□ 2.571e-8■■■□□ 15.5
AARSP49588 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.67■■■□□ 2.51e-8■■■□□ 15.5
AARSP49588 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.67■■■□□ 2.51e-8■■■□□ 15.5
AARSP49588 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.091e-8■■■□□ 15.5
AARSP49588 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.26■■□□□ 1.631e-8■■■□□ 15.5
AARSP49588 UBE2H-208ENST00000490974 572 ntTSL 524.62■■□□□ 1.531e-6■■■□□ 15.5
AARSP49588 UBE2H-203ENST00000472396 758 ntTSL 522.88■■□□□ 1.251e-6■■■□□ 15.5
AARSP49588 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.98■■□□□ 1.111e-8■■■□□ 15.5
AARSP49588 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.061e-6■■■□□ 15.5
AARSP49588 KLHDC4-207ENST00000562155 1757 ntTSL 521.27■■□□□ 11e-6■■■□□ 15.5
AARSP49588 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.951e-6■■■□□ 15.5
AARSP49588 PDE8A-211ENST00000559742 2584 ntTSL 1 (best)20.93■□□□□ 0.941e-6■■■□□ 15.5
AARSP49588 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.9■□□□□ 0.941e-6■■■□□ 15.5
AARSP49588 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.921e-6■■■□□ 15.5
AARSP49588 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.871e-6■■■□□ 15.5
AARSP49588 SCART1-205ENST00000488261 4709 ntTSL 220.41■□□□□ 0.861e-6■■■□□ 15.5
AARSP49588 PDE8A-204ENST00000478717 2722 ntTSL 1 (best)20.18■□□□□ 0.821e-6■■■□□ 15.5
AARSP49588 SCART1-204ENST00000482993 4904 ntTSL 220.16■□□□□ 0.821e-6■■■□□ 15.5
AARSP49588 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.05■□□□□ 0.81e-6■■■□□ 15.5
AARSP49588 SCART1-202ENST00000463137 4756 ntTSL 219.7■□□□□ 0.741e-6■■■□□ 15.5
AARSP49588 KLHDC4-202ENST00000316853 1287 ntTSL 1 (best)19.61■□□□□ 0.731e-6■■■□□ 15.5
AARSP49588 KLHDC4-217ENST00000566661 2232 ntTSL 519.36■□□□□ 0.691e-6■■■□□ 15.5
AARSP49588 PDE8A-205ENST00000485596 2999 ntTSL 1 (best)19.09■□□□□ 0.651e-6■■■□□ 15.5
AARSP49588 PDE8A-210ENST00000559086 538 ntTSL 418.66■□□□□ 0.581e-6■■■□□ 15.5
AARSP49588 TNRC6A-209ENST00000562829 277 ntTSL 218.21■□□□□ 0.511e-6■■■□□ 15.5
AARSP49588 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.29■□□□□ 0.361e-6■■■□□ 15.5
AARSP49588 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.321e-6■■■□□ 15.5
AARSP49588 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.281e-6■■■□□ 15.5
AARSP49588 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.241e-6■■■□□ 15.5
AARSP49588 KLHDC4-208ENST00000562261 1065 ntTSL 316.51■□□□□ 0.231e-6■■■□□ 15.5
AARSP49588 KLHDC4-212ENST00000564396 563 ntTSL 515.74■□□□□ 0.111e-6■■■□□ 15.5
AARSP49588 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.11e-6■■■□□ 15.5
AARSP49588 KLHDC4-218ENST00000567298 4572 ntTSL 515.68■□□□□ 0.11e-6■■■□□ 15.5
AARSP49588 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.081e-6■■■□□ 15.5
AARSP49588 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.071e-6■■■□□ 15.5
AARSP49588 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.061e-6■■■□□ 15.5
AARSP49588 NSD2-218ENST00000508355 2092 ntTSL 1 (best)14.97□□□□□ -0.011e-8■■■□□ 15.5
AARSP49588 EHMT2-206ENST00000461880 1825 ntTSL 514.94□□□□□ -0.021e-6■■■□□ 15.5
AARSP49588 KLHDC4-226ENST00000569747 560 ntTSL 414.84□□□□□ -0.031e-6■■■□□ 15.5
AARSP49588 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.121e-6■■■□□ 15.5
AARSP49588 KLHDC4-214ENST00000565328 582 ntTSL 414.17□□□□□ -0.141e-6■■■□□ 15.5
AARSP49588 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.151e-6■■■□□ 15.5
AARSP49588 EHMT2-205ENST00000436026 894 ntTSL 513.94□□□□□ -0.181e-6■■■□□ 15.5
AARSP49588 NSD2-216ENST00000507820 528 ntTSL 513.91□□□□□ -0.181e-8■■■□□ 15.5
AARSP49588 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.251e-6■■■□□ 15.5
AARSP49588 EHMT2-210ENST00000478491 1517 ntTSL 512.88□□□□□ -0.351e-6■■■□□ 15.5
AARSP49588 PDE8A-208ENST00000557957 3716 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.391e-6■■■□□ 15.5
AARSP49588 EHMT2-211ENST00000480912 3940 ntTSL 511.88□□□□□ -0.511e-6■■■□□ 15.5
AARSP49588 EIF3D-209ENST00000462641 887 ntTSL 211.87□□□□□ -0.511e-6■■■□□ 15.5
AARSP49588 EHMT2-212ENST00000494816 3036 ntTSL 511.78□□□□□ -0.521e-6■■■□□ 15.5
Retrieved 100 of 8,200 protein–RNA pairs in 208 ms