RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 NISCHQ9Y2I1 1504 aa22.91■■□□□ 1.26
RAB11FIP1-204ENST00000522774 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.73
RAB11FIP1-204ENST00000522774 ZCCHC6Q5VYS8 1495 aaKnown RBP19.36■□□□□ 0.69
RAB11FIP1-204ENST00000522774 SHROOM4Q9ULL8 1493 aa19.36■□□□□ 0.69
RAB11FIP1-204ENST00000522774 DCAF8L2P0C7V8 631 aa18.96■□□□□ 0.63
RAB11FIP1-204ENST00000522774 SUPT5HO00267 1087 aaKnown RBP18.88■□□□□ 0.61
RAB11FIP1-204ENST00000522774 DCAF1Q9Y4B6 1507 aa18.82■□□□□ 0.6
RAB11FIP1-204ENST00000522774 MYO15BQ96JP2 1530 aa18.33■□□□□ 0.53
RAB11FIP1-204ENST00000522774 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
RAB11FIP1-204ENST00000522774 CHIC1Q5VXU3 224 aa18.3■□□□□ 0.52
RAB11FIP1-204ENST00000522774 ABCC9O60706 1549 aa18.25■□□□□ 0.51
RAB11FIP1-204ENST00000522774 NACADO15069 1562 aa18.13■□□□□ 0.49
RAB11FIP1-204ENST00000522774 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
RAB11FIP1-204ENST00000522774 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
RAB11FIP1-204ENST00000522774 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
RAB11FIP1-204ENST00000522774 MROH2BQ7Z745 1585 aa17.81■□□□□ 0.44
RAB11FIP1-204ENST00000522774 LOC105371045A0A1W2PR82 267 aa17.73■□□□□ 0.43
RAB11FIP1-204ENST00000522774 WIZO95785 1651 aa17.7■□□□□ 0.42
RAB11FIP1-204ENST00000522774 UNC13AQ9UPW8 1703 aa17.64■□□□□ 0.41
RAB11FIP1-204ENST00000522774 BAZ1AQ9NRL2 1556 aaPredicted RBP17.61■□□□□ 0.41
RAB11FIP1-204ENST00000522774 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
RAB11FIP1-204ENST00000522774 PCGF6Q9BYE7 350 aa17.51■□□□□ 0.39
RAB11FIP1-204ENST00000522774 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
RAB11FIP1-204ENST00000522774 FAM9AQ8IZU1 332 aaPredicted RBP17.45■□□□□ 0.38
RAB11FIP1-204ENST00000522774 TOP2AP11388 1531 aaKnown RBP17.43■□□□□ 0.38
RAB11FIP1-204ENST00000522774 EIF4G1Q04637 1599 aaKnown RBP17.42■□□□□ 0.38
RAB11FIP1-204ENST00000522774 BICRAQ9NZM4 1560 aa17.42■□□□□ 0.38
RAB11FIP1-204ENST00000522774 HRCP23327 699 aa17.41■□□□□ 0.38
RAB11FIP1-204ENST00000522774 PABPN1Q86U42 306 aaKnown RBP eCLIP17.4■□□□□ 0.38
RAB11FIP1-204ENST00000522774 CCDC88BA6NC98 1476 aa17.34■□□□□ 0.37
RAB11FIP1-204ENST00000522774 SMARCA2P51531 1590 aa17.33■□□□□ 0.36
RAB11FIP1-204ENST00000522774 EHMT2Q96KQ7 1210 aa17.29■□□□□ 0.36
RAB11FIP1-204ENST00000522774 ABCC8Q09428 1581 aa17.24■□□□□ 0.35
RAB11FIP1-204ENST00000522774 TRIM26Q12899 539 aaPredicted RBP17.23■□□□□ 0.35
RAB11FIP1-204ENST00000522774 PEG3Q9GZU2 1588 aa17.18■□□□□ 0.34
RAB11FIP1-204ENST00000522774 PPARGC1BQ86YN6 1023 aaKnown RBP17.08■□□□□ 0.32
RAB11FIP1-204ENST00000522774 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
RAB11FIP1-204ENST00000522774 SOGA1O94964 1423 aa17.03■□□□□ 0.32
RAB11FIP1-204ENST00000522774 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
RAB11FIP1-204ENST00000522774 RUSC2Q8N2Y8 1516 aa16.96■□□□□ 0.31
RAB11FIP1-204ENST00000522774 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.3
RAB11FIP1-204ENST00000522774 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
RAB11FIP1-204ENST00000522774 EEA1Q15075 1411 aa16.9■□□□□ 0.3
RAB11FIP1-204ENST00000522774 CSRNP3Q8WYN3 585 aa16.89■□□□□ 0.29
RAB11FIP1-204ENST00000522774 CEP162Q5TB80 1403 aa16.86■□□□□ 0.29
RAB11FIP1-204ENST00000522774 TNIKQ9UKE5 1360 aa16.84■□□□□ 0.29
RAB11FIP1-204ENST00000522774 GOLGA3Q08378 1498 aa16.78■□□□□ 0.28
RAB11FIP1-204ENST00000522774 UBTFP17480 764 aaKnown RBP16.78■□□□□ 0.28
RAB11FIP1-204ENST00000522774 NCAPD3P42695 1498 aa16.78■□□□□ 0.28
RAB11FIP1-204ENST00000522774 HMGXB3Q12766 1538 aa16.77■□□□□ 0.28
RAB11FIP1-204ENST00000522774 ZEB1P37275 1124 aaPredicted RBP16.75■□□□□ 0.27
RAB11FIP1-204ENST00000522774 TOP2BQ02880 1626 aa16.71■□□□□ 0.27
RAB11FIP1-204ENST00000522774 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.27
RAB11FIP1-204ENST00000522774 KIF21BO75037 1637 aa16.71■□□□□ 0.27
RAB11FIP1-204ENST00000522774 TTBK1Q5TCY1 1321 aaPredicted RBP16.69■□□□□ 0.26
RAB11FIP1-204ENST00000522774 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
RAB11FIP1-204ENST00000522774 RAPGEF2Q9Y4G8 1499 aa16.63■□□□□ 0.25
RAB11FIP1-204ENST00000522774 CFTRP13569 1480 aa16.59■□□□□ 0.25
RAB11FIP1-204ENST00000522774 CUX1P39880 1505 aa16.59■□□□□ 0.25
RAB11FIP1-204ENST00000522774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.59■□□□□ 0.25
RAB11FIP1-204ENST00000522774 CLIP1P30622 1438 aa16.58■□□□□ 0.24
RAB11FIP1-204ENST00000522774 CCER1Q8TC90 406 aaPredicted RBP16.51■□□□□ 0.23
RAB11FIP1-204ENST00000522774 RANGAP1P46060 587 aaPredicted RBP16.49■□□□□ 0.23
RAB11FIP1-204ENST00000522774 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
RAB11FIP1-204ENST00000522774 PRXQ9BXM0 1461 aa16.49■□□□□ 0.23
RAB11FIP1-204ENST00000522774 PRDM2Q13029 1718 aa16.48■□□□□ 0.23
RAB11FIP1-204ENST00000522774 ERICH3Q5RHP9 1530 aa16.47■□□□□ 0.23
RAB11FIP1-204ENST00000522774 CC2D2AQ9P2K1 1620 aa16.46■□□□□ 0.22
RAB11FIP1-204ENST00000522774 KIF27Q86VH2 1401 aa16.44■□□□□ 0.22
RAB11FIP1-204ENST00000522774 CADPSQ9ULU8 1353 aa16.43■□□□□ 0.22
RAB11FIP1-204ENST00000522774 ARAP1Q96P48 1450 aa16.37■□□□□ 0.21
RAB11FIP1-204ENST00000522774 APLP2Q06481 763 aa16.35■□□□□ 0.21
RAB11FIP1-204ENST00000522774 CUX2O14529 1486 aa16.33■□□□□ 0.2
RAB11FIP1-204ENST00000522774 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
RAB11FIP1-204ENST00000522774 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
RAB11FIP1-204ENST00000522774 IGF1RP08069 1367 aa16.29■□□□□ 0.2
RAB11FIP1-204ENST00000522774 FANCD2Q9BXW9 1451 aa16.28■□□□□ 0.2
RAB11FIP1-204ENST00000522774 ARHGAP35Q9NRY4 1499 aa16.25■□□□□ 0.19
RAB11FIP1-204ENST00000522774 NESP48681 1621 aa16.23■□□□□ 0.19
RAB11FIP1-204ENST00000522774 KANK4Q5T7N3 995 aaPredicted RBP16.22■□□□□ 0.19
RAB11FIP1-204ENST00000522774 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.18
RAB11FIP1-204ENST00000522774 DNMBPQ6XZF7 1577 aa16.19■□□□□ 0.18
RAB11FIP1-204ENST00000522774 RAD54L2Q9Y4B4 1467 aa16.17■□□□□ 0.18
RAB11FIP1-204ENST00000522774 TOPBP1Q92547 1522 aa16.16■□□□□ 0.18
RAB11FIP1-204ENST00000522774 POLA1P09884 1462 aaPredicted RBP16.15■□□□□ 0.18
RAB11FIP1-204ENST00000522774 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
RAB11FIP1-204ENST00000522774 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
RAB11FIP1-204ENST00000522774 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
RAB11FIP1-204ENST00000522774 RRBP1Q9P2E9 1410 aaKnown RBP16.09■□□□□ 0.17
RAB11FIP1-204ENST00000522774 DIEXFQ68CQ4 756 aaKnown RBP16.08■□□□□ 0.17
RAB11FIP1-204ENST00000522774 URB2Q14146 1524 aaKnown RBP16.07■□□□□ 0.16
RAB11FIP1-204ENST00000522774 TIAM1Q13009 1591 aa16.04■□□□□ 0.16
RAB11FIP1-204ENST00000522774 ZNF316A6NFI3 1004 aaPredicted RBP16.03■□□□□ 0.16
RAB11FIP1-204ENST00000522774 P3H3Q8IVL6 736 aa16.02■□□□□ 0.15
RAB11FIP1-204ENST00000522774 WDR97A6NE52 1622 aa16.02■□□□□ 0.15
RAB11FIP1-204ENST00000522774 CCNB3Q8WWL7 1395 aa16.01■□□□□ 0.15
RAB11FIP1-204ENST00000522774 CUL7Q14999 1698 aa16■□□□□ 0.15
RAB11FIP1-204ENST00000522774 MAP3K1Q13233 1512 aa16■□□□□ 0.15
RAB11FIP1-204ENST00000522774 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
RAB11FIP1-204ENST00000522774 PCF11O94913 1555 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms