RNA–Protein interactions for RNA: ENST00000523182.5

RAB11FIP1-205, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 2,329 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-205ENST00000523182 NISCHQ9Y2I1 1504 aa31.07■■■□□ 2.56
RAB11FIP1-205ENST00000523182 CCDC180Q9P1Z9 1646 aa26.64■■□□□ 1.86
RAB11FIP1-205ENST00000523182 ZCCHC6Q5VYS8 1495 aaKnown RBP26.22■■□□□ 1.79
RAB11FIP1-205ENST00000523182 SHROOM4Q9ULL8 1493 aa26.06■■□□□ 1.76
RAB11FIP1-205ENST00000523182 DCAF8L2P0C7V8 631 aa25.69■■□□□ 1.7
RAB11FIP1-205ENST00000523182 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.69
RAB11FIP1-205ENST00000523182 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
RAB11FIP1-205ENST00000523182 MYO15BQ96JP2 1530 aa25■■□□□ 1.59
RAB11FIP1-205ENST00000523182 ABCC9O60706 1549 aa24.81■■□□□ 1.56
RAB11FIP1-205ENST00000523182 SCRIBQ14160 1630 aa24.78■■□□□ 1.56
RAB11FIP1-205ENST00000523182 NACADO15069 1562 aa24.7■■□□□ 1.54
RAB11FIP1-205ENST00000523182 CHIC1Q5VXU3 224 aa24.62■■□□□ 1.53
RAB11FIP1-205ENST00000523182 RSF1Q96T23 1441 aaPredicted RBP24.43■■□□□ 1.5
RAB11FIP1-205ENST00000523182 RB1CC1Q8TDY2 1594 aa24.35■■□□□ 1.49
RAB11FIP1-205ENST00000523182 CECR2Q9BXF3 1484 aa24.19■■□□□ 1.46
RAB11FIP1-205ENST00000523182 MROH2BQ7Z745 1585 aa24.09■■□□□ 1.45
RAB11FIP1-205ENST00000523182 WIZO95785 1651 aa23.93■■□□□ 1.42
RAB11FIP1-205ENST00000523182 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
RAB11FIP1-205ENST00000523182 BAZ1AQ9NRL2 1556 aaPredicted RBP23.91■■□□□ 1.42
RAB11FIP1-205ENST00000523182 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
RAB11FIP1-205ENST00000523182 TRIM41Q8WV44 630 aa23.78■■□□□ 1.4
RAB11FIP1-205ENST00000523182 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
RAB11FIP1-205ENST00000523182 BICRAQ9NZM4 1560 aa23.66■■□□□ 1.38
RAB11FIP1-205ENST00000523182 PABPN1Q86U42 306 aaKnown RBP eCLIP23.62■■□□□ 1.37
RAB11FIP1-205ENST00000523182 TOP2AP11388 1531 aaKnown RBP23.62■■□□□ 1.37
RAB11FIP1-205ENST00000523182 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.35
RAB11FIP1-205ENST00000523182 FAM9AQ8IZU1 332 aaPredicted RBP23.47■■□□□ 1.35
RAB11FIP1-205ENST00000523182 CCDC88BA6NC98 1476 aa23.47■■□□□ 1.35
RAB11FIP1-205ENST00000523182 PCGF6Q9BYE7 350 aa23.45■■□□□ 1.35
RAB11FIP1-205ENST00000523182 SMARCA2P51531 1590 aa23.45■■□□□ 1.34
RAB11FIP1-205ENST00000523182 PEG3Q9GZU2 1588 aa23.35■■□□□ 1.33
RAB11FIP1-205ENST00000523182 HRCP23327 699 aa23.27■■□□□ 1.32
RAB11FIP1-205ENST00000523182 ABCC8Q09428 1581 aa23.25■■□□□ 1.31
RAB11FIP1-205ENST00000523182 EHMT2Q96KQ7 1210 aa23.2■■□□□ 1.3
RAB11FIP1-205ENST00000523182 ATAD2BQ9ULI0 1458 aa23.19■■□□□ 1.3
RAB11FIP1-205ENST00000523182 TRIM26Q12899 539 aaPredicted RBP23.17■■□□□ 1.3
RAB11FIP1-205ENST00000523182 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
RAB11FIP1-205ENST00000523182 SOGA1O94964 1423 aa22.97■■□□□ 1.27
RAB11FIP1-205ENST00000523182 WRNQ14191 1432 aaPredicted RBP eCLIP22.96■■□□□ 1.27
RAB11FIP1-205ENST00000523182 EEA1Q15075 1411 aa22.91■■□□□ 1.26
RAB11FIP1-205ENST00000523182 RUSC2Q8N2Y8 1516 aa22.86■■□□□ 1.25
RAB11FIP1-205ENST00000523182 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
RAB11FIP1-205ENST00000523182 NCAPD3P42695 1498 aa22.84■■□□□ 1.25
RAB11FIP1-205ENST00000523182 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
RAB11FIP1-205ENST00000523182 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
RAB11FIP1-205ENST00000523182 TNIKQ9UKE5 1360 aa22.76■■□□□ 1.23
RAB11FIP1-205ENST00000523182 CEP162Q5TB80 1403 aa22.74■■□□□ 1.23
RAB11FIP1-205ENST00000523182 PPARGC1BQ86YN6 1023 aaKnown RBP22.74■■□□□ 1.23
RAB11FIP1-205ENST00000523182 GOLGA3Q08378 1498 aa22.69■■□□□ 1.22
RAB11FIP1-205ENST00000523182 UBTFP17480 764 aaKnown RBP22.68■■□□□ 1.22
RAB11FIP1-205ENST00000523182 TOP2BQ02880 1626 aa22.64■■□□□ 1.22
RAB11FIP1-205ENST00000523182 CEP164Q9UPV0 1460 aa22.61■■□□□ 1.21
RAB11FIP1-205ENST00000523182 KIF21BO75037 1637 aa22.59■■□□□ 1.21
RAB11FIP1-205ENST00000523182 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
RAB11FIP1-205ENST00000523182 CFTRP13569 1480 aa22.55■■□□□ 1.2
RAB11FIP1-205ENST00000523182 ZEB1P37275 1124 aaPredicted RBP22.54■■□□□ 1.2
RAB11FIP1-205ENST00000523182 CUX1P39880 1505 aa22.46■■□□□ 1.19
RAB11FIP1-205ENST00000523182 RAPGEF2Q9Y4G8 1499 aa22.45■■□□□ 1.18
RAB11FIP1-205ENST00000523182 CLIP1P30622 1438 aa22.4■■□□□ 1.18
RAB11FIP1-205ENST00000523182 CC2D2AQ9P2K1 1620 aa22.39■■□□□ 1.18
RAB11FIP1-205ENST00000523182 TTBK1Q5TCY1 1321 aaPredicted RBP22.38■■□□□ 1.17
RAB11FIP1-205ENST00000523182 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
RAB11FIP1-205ENST00000523182 CADPSQ9ULU8 1353 aa22.35■■□□□ 1.17
RAB11FIP1-205ENST00000523182 PRXQ9BXM0 1461 aa22.32■■□□□ 1.16
RAB11FIP1-205ENST00000523182 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
RAB11FIP1-205ENST00000523182 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
RAB11FIP1-205ENST00000523182 VPS8Q8N3P4 1428 aa22.27■■□□□ 1.16
RAB11FIP1-205ENST00000523182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.24■■□□□ 1.15
RAB11FIP1-205ENST00000523182 RANGAP1P46060 587 aaPredicted RBP22.22■■□□□ 1.15
RAB11FIP1-205ENST00000523182 CCER1Q8TC90 406 aaPredicted RBP22.19■■□□□ 1.14
RAB11FIP1-205ENST00000523182 APLP2Q06481 763 aa22.13■■□□□ 1.13
RAB11FIP1-205ENST00000523182 CUX2O14529 1486 aa22.12■■□□□ 1.13
RAB11FIP1-205ENST00000523182 FANCD2Q9BXW9 1451 aa22.12■■□□□ 1.13
RAB11FIP1-205ENST00000523182 FGD5Q6ZNL6 1462 aa22.11■■□□□ 1.13
RAB11FIP1-205ENST00000523182 IGF1RP08069 1367 aa22.07■■□□□ 1.12
RAB11FIP1-205ENST00000523182 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
RAB11FIP1-205ENST00000523182 NESP48681 1621 aa22.01■■□□□ 1.11
RAB11FIP1-205ENST00000523182 DNMBPQ6XZF7 1577 aa21.98■■□□□ 1.11
RAB11FIP1-205ENST00000523182 CARMIL1Q5VZK9 1371 aa21.97■■□□□ 1.11
RAB11FIP1-205ENST00000523182 ARHGAP35Q9NRY4 1499 aa21.95■■□□□ 1.1
RAB11FIP1-205ENST00000523182 TOPBP1Q92547 1522 aa21.94■■□□□ 1.1
RAB11FIP1-205ENST00000523182 HNRNPUL2Q1KMD3 747 aaKnown RBP21.94■■□□□ 1.1
RAB11FIP1-205ENST00000523182 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
RAB11FIP1-205ENST00000523182 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
RAB11FIP1-205ENST00000523182 RAD54L2Q9Y4B4 1467 aa21.9■■□□□ 1.1
RAB11FIP1-205ENST00000523182 ABCA10Q8WWZ4 1543 aa21.89■■□□□ 1.09
RAB11FIP1-205ENST00000523182 KANK4Q5T7N3 995 aaPredicted RBP21.86■■□□□ 1.09
RAB11FIP1-205ENST00000523182 DNAJC5BQ9UF47 199 aa21.81■■□□□ 1.08
RAB11FIP1-205ENST00000523182 URB2Q14146 1524 aaKnown RBP21.81■■□□□ 1.08
RAB11FIP1-205ENST00000523182 PDS5BQ9NTI5 1447 aa21.78■■□□□ 1.08
RAB11FIP1-205ENST00000523182 CUL7Q14999 1698 aa21.72■■□□□ 1.07
RAB11FIP1-205ENST00000523182 RRBP1Q9P2E9 1410 aaKnown RBP21.71■■□□□ 1.07
RAB11FIP1-205ENST00000523182 WDR97A6NE52 1622 aa21.7■■□□□ 1.06
RAB11FIP1-205ENST00000523182 MAP3K1Q13233 1512 aa21.68■■□□□ 1.06
RAB11FIP1-205ENST00000523182 KIF21AQ7Z4S6 1674 aa21.66■■□□□ 1.06
RAB11FIP1-205ENST00000523182 TIAM1Q13009 1591 aa21.66■■□□□ 1.06
RAB11FIP1-205ENST00000523182 FHAD1B1AJZ9 1412 aa21.66■■□□□ 1.06
RAB11FIP1-205ENST00000523182 TDRD9Q8NDG6 1382 aaKnown RBP21.65■■□□□ 1.06
RAB11FIP1-205ENST00000523182 ABCA5Q8WWZ7 1642 aa21.63■■□□□ 1.05
RAB11FIP1-205ENST00000523182 P3H3Q8IVL6 736 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms