RNA–Protein interactions for RNA: ENST00000462641.1

EIF3D-209, Transcript of eukaryotic translation initiation factor 3 subunit D, humanhuman

TSL 2

Gene EIF3D, Length 887 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3D-209ENST00000462641 NISCHQ9Y2I1 1504 aa27.62■■■□□ 2.01
EIF3D-209ENST00000462641 ABCC9O60706 1549 aa25.12■■□□□ 1.61
EIF3D-209ENST00000462641 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
EIF3D-209ENST00000462641 RB1CC1Q8TDY2 1594 aa23.86■■□□□ 1.41
EIF3D-209ENST00000462641 DNAJC5BQ9UF47 199 aa23.64■■□□□ 1.37
EIF3D-209ENST00000462641 NACADO15069 1562 aa23.61■■□□□ 1.37
EIF3D-209ENST00000462641 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
EIF3D-209ENST00000462641 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
EIF3D-209ENST00000462641 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
EIF3D-209ENST00000462641 MYO15BQ96JP2 1530 aa23.18■■□□□ 1.3
EIF3D-209ENST00000462641 BICRAQ9NZM4 1560 aa23.08■■□□□ 1.29
EIF3D-209ENST00000462641 ZCCHC6Q5VYS8 1495 aaKnown RBP22.85■■□□□ 1.25
EIF3D-209ENST00000462641 SHROOM4Q9ULL8 1493 aa22.83■■□□□ 1.25
EIF3D-209ENST00000462641 DCAF1Q9Y4B6 1507 aa22.8■■□□□ 1.24
EIF3D-209ENST00000462641 SCRIBQ14160 1630 aa22.72■■□□□ 1.23
EIF3D-209ENST00000462641 CC2D2AQ9P2K1 1620 aa22.69■■□□□ 1.22
EIF3D-209ENST00000462641 CECR2Q9BXF3 1484 aa22.66■■□□□ 1.22
EIF3D-209ENST00000462641 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
EIF3D-209ENST00000462641 DNAJC5Q9H3Z4 198 aa21.93■■□□□ 1.1
EIF3D-209ENST00000462641 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
EIF3D-209ENST00000462641 CUX2O14529 1486 aa21.77■■□□□ 1.07
EIF3D-209ENST00000462641 NCAPD3P42695 1498 aa21.75■■□□□ 1.07
EIF3D-209ENST00000462641 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
EIF3D-209ENST00000462641 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
EIF3D-209ENST00000462641 SMARCA4P51532 1647 aa21.62■■□□□ 1.05
EIF3D-209ENST00000462641 HMGXB3Q12766 1538 aa21.62■■□□□ 1.05
EIF3D-209ENST00000462641 BAZ1BQ9UIG0 1483 aaKnown RBP21.51■■□□□ 1.03
EIF3D-209ENST00000462641 BAZ1AQ9NRL2 1556 aaPredicted RBP21.5■■□□□ 1.03
EIF3D-209ENST00000462641 NESP48681 1621 aa21.49■■□□□ 1.03
EIF3D-209ENST00000462641 PEG3Q9GZU2 1588 aa21.39■■□□□ 1.01
EIF3D-209ENST00000462641 LAMC3Q9Y6N6 1575 aa21.36■■□□□ 1.01
EIF3D-209ENST00000462641 THOC2Q8NI27 1593 aaKnown RBP21.35■■□□□ 1.01
EIF3D-209ENST00000462641 MROH2BQ7Z745 1585 aa21.27■□□□□ 0.99
EIF3D-209ENST00000462641 KIF21AQ7Z4S6 1674 aa21.26■□□□□ 0.99
EIF3D-209ENST00000462641 PDS5BQ9NTI5 1447 aa21.25■□□□□ 0.99
EIF3D-209ENST00000462641 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
EIF3D-209ENST00000462641 MRC2Q9UBG0 1479 aa21.07■□□□□ 0.96
EIF3D-209ENST00000462641 WIZO95785 1651 aa21.03■□□□□ 0.96
EIF3D-209ENST00000462641 WDR62O43379 1518 aa21.01■□□□□ 0.95
EIF3D-209ENST00000462641 CEP164Q9UPV0 1460 aa20.97■□□□□ 0.95
EIF3D-209ENST00000462641 TRIM41Q8WV44 630 aa20.97■□□□□ 0.95
EIF3D-209ENST00000462641 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.94
EIF3D-209ENST00000462641 CFTRP13569 1480 aa20.81■□□□□ 0.92
EIF3D-209ENST00000462641 TOP2AP11388 1531 aaKnown RBP20.77■□□□□ 0.92
EIF3D-209ENST00000462641 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
EIF3D-209ENST00000462641 OSCARQ8IYS5 282 aa20.71■□□□□ 0.91
EIF3D-209ENST00000462641 URB2Q14146 1524 aaKnown RBP20.7■□□□□ 0.9
EIF3D-209ENST00000462641 PRDM2Q13029 1718 aa20.67■□□□□ 0.9
EIF3D-209ENST00000462641 IFT140Q96RY7 1462 aa20.53■□□□□ 0.88
EIF3D-209ENST00000462641 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
EIF3D-209ENST00000462641 RIMBP3CA6NJZ7 1639 aa20.49■□□□□ 0.87
EIF3D-209ENST00000462641 RIMBP3BA6NNM3 1639 aa20.49■□□□□ 0.87
EIF3D-209ENST00000462641 RIMBP3Q9UFD9 1639 aa20.49■□□□□ 0.87
EIF3D-209ENST00000462641 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
EIF3D-209ENST00000462641 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
EIF3D-209ENST00000462641 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
EIF3D-209ENST00000462641 EIF4G3O43432 1585 aaKnown RBP20.42■□□□□ 0.86
EIF3D-209ENST00000462641 DNMBPQ6XZF7 1577 aa20.39■□□□□ 0.85
EIF3D-209ENST00000462641 ARHGEF11O15085 1522 aa20.39■□□□□ 0.85
EIF3D-209ENST00000462641 CHD1O14646 1710 aa20.3■□□□□ 0.84
EIF3D-209ENST00000462641 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.84
EIF3D-209ENST00000462641 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.846e-8■■■□□ 16
EIF3D-209ENST00000462641 FBLN2P98095 1184 aa20.25■□□□□ 0.83
EIF3D-209ENST00000462641 CYB5RLQ6IPT4 315 aa20.25■□□□□ 0.83
EIF3D-209ENST00000462641 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
EIF3D-209ENST00000462641 TRHP20396 242 aaPredicted RBP20.16■□□□□ 0.82
EIF3D-209ENST00000462641 ARAP1Q96P48 1450 aa20.16■□□□□ 0.82
EIF3D-209ENST00000462641 RAD54L2Q9Y4B4 1467 aa20.15■□□□□ 0.82
EIF3D-209ENST00000462641 SOGA1O94964 1423 aa20.14■□□□□ 0.81
EIF3D-209ENST00000462641 WDR97A6NE52 1622 aa20.12■□□□□ 0.81
EIF3D-209ENST00000462641 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
EIF3D-209ENST00000462641 SNAPC4Q5SXM2 1469 aa20.1■□□□□ 0.81
EIF3D-209ENST00000462641 FGD5Q6ZNL6 1462 aa20.09■□□□□ 0.81
EIF3D-209ENST00000462641 SYNJ1O43426 1573 aa20.06■□□□□ 0.8
EIF3D-209ENST00000462641 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
EIF3D-209ENST00000462641 MAGI1Q96QZ7 1491 aaPredicted RBP20.04■□□□□ 0.8
EIF3D-209ENST00000462641 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.8
EIF3D-209ENST00000462641 GRIN2BQ13224 1484 aa20.01■□□□□ 0.79
EIF3D-209ENST00000462641 CUX1P39880 1505 aa20.01■□□□□ 0.79
EIF3D-209ENST00000462641 SYNJ2O15056 1496 aa19.97■□□□□ 0.79
EIF3D-209ENST00000462641 PBRM1Q86U86 1689 aa19.95■□□□□ 0.78
EIF3D-209ENST00000462641 GAPVD1Q14C86 1478 aa19.91■□□□□ 0.78
EIF3D-209ENST00000462641 ABCA5Q8WWZ7 1642 aa19.84■□□□□ 0.77
EIF3D-209ENST00000462641 ABCA10Q8WWZ4 1543 aa19.83■□□□□ 0.77
EIF3D-209ENST00000462641 AEBP2Q6ZN18 517 aaPredicted RBP19.77■□□□□ 0.76
EIF3D-209ENST00000462641 GRIN2AQ12879 1464 aa19.75■□□□□ 0.75
EIF3D-209ENST00000462641 WRNQ14191 1432 aaPredicted RBP eCLIP19.74■□□□□ 0.75
EIF3D-209ENST00000462641 SUPT5HO00267 1087 aaKnown RBP19.72■□□□□ 0.75
EIF3D-209ENST00000462641 ADAMTS12P58397 1594 aa19.72■□□□□ 0.75
EIF3D-209ENST00000462641 CEP170Q5SW79 1584 aa19.67■□□□□ 0.74
EIF3D-209ENST00000462641 ERCC6L2Q5T890 1561 aa19.67■□□□□ 0.74
EIF3D-209ENST00000462641 BIVM-ERCC5R4GMW8 1640 aa19.66■□□□□ 0.74
EIF3D-209ENST00000462641 NUP160Q12769 1436 aa19.66■□□□□ 0.74
EIF3D-209ENST00000462641 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
EIF3D-209ENST00000462641 FHAD1B1AJZ9 1412 aa19.64■□□□□ 0.73
EIF3D-209ENST00000462641 SHROOM2Q13796 1616 aa19.61■□□□□ 0.73
EIF3D-209ENST00000462641 ERICH3Q5RHP9 1530 aa19.61■□□□□ 0.73
EIF3D-209ENST00000462641 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
EIF3D-209ENST00000462641 KIF13AQ9H1H9 1805 aa19.48■□□□□ 0.71
EIF3D-209ENST00000462641 JPH4Q96JJ6 628 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms