Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 POU5F1P4-201ENST00000413175 1085 ntBASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV23-1A0A0A0MS06 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 AP001160.3-201ENST00000601484 763 ntBASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 AC120498.10-201ENST00000621827 505 ntBASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 AC244015.2-201ENST00000616358 1861 ntBASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV23-1A0A0A0MS06 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 AC026471.1-201ENST00000564629 3026 ntBASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 KRT18P20-201ENST00000548986 1279 ntBASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV23-1A0A0A0MS06 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV23-1A0A0A0MS06 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV23-1A0A0A0MS06 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV23-1A0A0A0MS06 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV23-1A0A0A0MS06 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV23-1A0A0A0MS06 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV23-1A0A0A0MS06 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.41■□□□□ 0.38
TRBV23-1A0A0A0MS06 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV23-1A0A0A0MS06 KRT18P11-201ENST00000435214 1283 ntBASIC17.41■□□□□ 0.38
TRBV23-1A0A0A0MS06 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.41■□□□□ 0.38
TRBV23-1A0A0A0MS06 KRT18P61-201ENST00000585825 1298 ntBASIC17.41■□□□□ 0.38
TRBV23-1A0A0A0MS06 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV23-1A0A0A0MS06 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV23-1A0A0A0MS06 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV23-1A0A0A0MS06 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms