RNA–Protein interactions for RNA: ENST00000372954.5

CIZ1-206, Transcript of CDKN1A interacting zinc finger protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CIZ1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIZ1-206ENST00000372954 NISCHQ9Y2I1 1504 aa43.23■■■■■ 4.51
CIZ1-206ENST00000372954 SHROOM4Q9ULL8 1493 aa37.7■■■■□ 3.63
CIZ1-206ENST00000372954 CCDC180Q9P1Z9 1646 aa36.99■■■■□ 3.51
CIZ1-206ENST00000372954 SUPT5HO00267 1087 aaKnown RBP36.87■■■■□ 3.49
CIZ1-206ENST00000372954 DCAF8L2P0C7V8 631 aa36.86■■■■□ 3.49
CIZ1-206ENST00000372954 ZCCHC6Q5VYS8 1495 aaKnown RBP36.48■■■■□ 3.43
CIZ1-206ENST00000372954 DCAF1Q9Y4B6 1507 aa35.43■■■■□ 3.26
CIZ1-206ENST00000372954 CHIC1Q5VXU3 224 aa35.41■■■■□ 3.26
CIZ1-206ENST00000372954 MYO15BQ96JP2 1530 aa35.37■■■■□ 3.25
CIZ1-206ENST00000372954 ABCC9O60706 1549 aa34.94■■■■□ 3.18
CIZ1-206ENST00000372954 SCRIBQ14160 1630 aa34.82■■■■□ 3.16
CIZ1-206ENST00000372954 LOC105371045A0A1W2PR82 267 aa34.74■■■■□ 3.15
CIZ1-206ENST00000372954 PCGF6Q9BYE7 350 aa34.54■■■■□ 3.12
CIZ1-206ENST00000372954 NACADO15069 1562 aa34.45■■■■□ 3.11
CIZ1-206ENST00000372954 RSF1Q96T23 1441 aaPredicted RBP34.33■■■■□ 3.09
CIZ1-206ENST00000372954 EHMT2Q96KQ7 1210 aa34.32■■■■□ 3.09
CIZ1-206ENST00000372954 FAM9AQ8IZU1 332 aaPredicted RBP34.23■■■■□ 3.07
CIZ1-206ENST00000372954 HRCP23327 699 aa34.1■■■■□ 3.05
CIZ1-206ENST00000372954 CECR2Q9BXF3 1484 aa34.08■■■■□ 3.05
CIZ1-206ENST00000372954 RB1CC1Q8TDY2 1594 aa34.08■■■■□ 3.05
CIZ1-206ENST00000372954 TRIM41Q8WV44 630 aa34.04■■■■□ 3.04
CIZ1-206ENST00000372954 PPARGC1BQ86YN6 1023 aaKnown RBP33.98■■■■□ 3.03
CIZ1-206ENST00000372954 MROH2BQ7Z745 1585 aa33.83■■■■□ 3.01
CIZ1-206ENST00000372954 WIZO95785 1651 aa33.67■■■□□ 2.98
CIZ1-206ENST00000372954 TRIM26Q12899 539 aaPredicted RBP33.47■■■□□ 2.95
CIZ1-206ENST00000372954 PABPN1Q86U42 306 aaKnown RBP eCLIP33.39■■■□□ 2.94
CIZ1-206ENST00000372954 UNC13AQ9UPW8 1703 aa33.35■■■□□ 2.93
CIZ1-206ENST00000372954 BAZ1AQ9NRL2 1556 aaPredicted RBP33.2■■■□□ 2.9
CIZ1-206ENST00000372954 TTBK1Q5TCY1 1321 aaPredicted RBP33.11■■■□□ 2.89
CIZ1-206ENST00000372954 ABCC8Q09428 1581 aa33.06■■■□□ 2.88
CIZ1-206ENST00000372954 BICRAQ9NZM4 1560 aa33.06■■■□□ 2.88
CIZ1-206ENST00000372954 SMARCA4P51532 1647 aa32.96■■■□□ 2.87
CIZ1-206ENST00000372954 CCDC88BA6NC98 1476 aa32.95■■■□□ 2.86
CIZ1-206ENST00000372954 TOP2AP11388 1531 aaKnown RBP32.84■■■□□ 2.85
CIZ1-206ENST00000372954 EIF4G1Q04637 1599 aaKnown RBP32.83■■■□□ 2.85
CIZ1-206ENST00000372954 SMARCA2P51531 1590 aa32.77■■■□□ 2.84
CIZ1-206ENST00000372954 SOGA1O94964 1423 aa32.72■■■□□ 2.83
CIZ1-206ENST00000372954 RUSC2Q8N2Y8 1516 aa32.63■■■□□ 2.81
CIZ1-206ENST00000372954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.62■■■□□ 2.81
CIZ1-206ENST00000372954 UBTFP17480 764 aaKnown RBP32.56■■■□□ 2.8
CIZ1-206ENST00000372954 RANGAP1P46060 587 aaPredicted RBP32.46■■■□□ 2.79
CIZ1-206ENST00000372954 ZEB1P37275 1124 aaPredicted RBP32.42■■■□□ 2.78
CIZ1-206ENST00000372954 CSRNP3Q8WYN3 585 aa32.41■■■□□ 2.78
CIZ1-206ENST00000372954 PEG3Q9GZU2 1588 aa32.4■■■□□ 2.78
CIZ1-206ENST00000372954 CEP162Q5TB80 1403 aa32.38■■■□□ 2.77
CIZ1-206ENST00000372954 ATAD2BQ9ULI0 1458 aa32.36■■■□□ 2.77
CIZ1-206ENST00000372954 CCER1Q8TC90 406 aaPredicted RBP32.35■■■□□ 2.77
CIZ1-206ENST00000372954 WRNQ14191 1432 aaPredicted RBP eCLIP32.27■■■□□ 2.764e-7■■■□□ 16.7
CIZ1-206ENST00000372954 BAZ1BQ9UIG0 1483 aaKnown RBP32.23■■■□□ 2.75
CIZ1-206ENST00000372954 SYNJ1O43426 1573 aa32.15■■■□□ 2.74
CIZ1-206ENST00000372954 TNIKQ9UKE5 1360 aa32.13■■■□□ 2.73
CIZ1-206ENST00000372954 GOLGA3Q08378 1498 aa32■■■□□ 2.71
CIZ1-206ENST00000372954 HNRNPUL2Q1KMD3 747 aaKnown RBP31.94■■■□□ 2.7
CIZ1-206ENST00000372954 EEA1Q15075 1411 aa31.93■■■□□ 2.7
CIZ1-206ENST00000372954 NCAPD3P42695 1498 aa31.9■■■□□ 2.7
CIZ1-206ENST00000372954 RAPGEF2Q9Y4G8 1499 aa31.84■■■□□ 2.69
CIZ1-206ENST00000372954 CLIP1P30622 1438 aa31.79■■■□□ 2.68
CIZ1-206ENST00000372954 HMGXB3Q12766 1538 aa31.78■■■□□ 2.68
CIZ1-206ENST00000372954 CEP164Q9UPV0 1460 aa31.78■■■□□ 2.68
CIZ1-206ENST00000372954 APLP2Q06481 763 aa31.64■■■□□ 2.66
CIZ1-206ENST00000372954 KIF21BO75037 1637 aa31.59■■■□□ 2.65
CIZ1-206ENST00000372954 SCAF1Q9H7N4 1312 aaKnown RBP31.58■■■□□ 2.65
CIZ1-206ENST00000372954 DIEXFQ68CQ4 756 aaKnown RBP31.55■■■□□ 2.64
CIZ1-206ENST00000372954 TOP2BQ02880 1626 aa31.52■■■□□ 2.64
CIZ1-206ENST00000372954 VPS8Q8N3P4 1428 aa31.5■■■□□ 2.63
CIZ1-206ENST00000372954 CUX1P39880 1505 aa31.44■■■□□ 2.62
CIZ1-206ENST00000372954 CC2D2AQ9P2K1 1620 aa31.44■■■□□ 2.62
CIZ1-206ENST00000372954 CFTRP13569 1480 aa31.41■■■□□ 2.62
CIZ1-206ENST00000372954 KANK4Q5T7N3 995 aaPredicted RBP31.39■■■□□ 2.61
CIZ1-206ENST00000372954 NEUROD1Q13562 356 aa31.33■■■□□ 2.61
CIZ1-206ENST00000372954 BIVM-ERCC5R4GMW8 1640 aa31.31■■■□□ 2.6
CIZ1-206ENST00000372954 ITGAEP38570 1179 aa31.29■■■□□ 2.6
CIZ1-206ENST00000372954 YTHDC1Q96MU7 727 aaKnown RBP31.26■■■□□ 2.59
CIZ1-206ENST00000372954 CADPSQ9ULU8 1353 aa31.25■■■□□ 2.59
CIZ1-206ENST00000372954 PRXQ9BXM0 1461 aa31.25■■■□□ 2.59
CIZ1-206ENST00000372954 ARAP1Q96P48 1450 aa31.23■■■□□ 2.59
CIZ1-206ENST00000372954 ZNF316A6NFI3 1004 aaPredicted RBP31.23■■■□□ 2.59
CIZ1-206ENST00000372954 KIF27Q86VH2 1401 aa31.21■■■□□ 2.59
CIZ1-206ENST00000372954 P3H3Q8IVL6 736 aa31.15■■■□□ 2.58
CIZ1-206ENST00000372954 ACIN1Q9UKV3 1341 aaKnown RBP31.13■■■□□ 2.57
CIZ1-206ENST00000372954 CUX2O14529 1486 aa31.12■■■□□ 2.57
CIZ1-206ENST00000372954 ATP1B4Q9UN42 357 aaPredicted RBP31.08■■■□□ 2.57
CIZ1-206ENST00000372954 ERICH3Q5RHP9 1530 aa31.05■■■□□ 2.56
CIZ1-206ENST00000372954 MIER1Q8N108 512 aa31.01■■■□□ 2.56
CIZ1-206ENST00000372954 ARHGAP35Q9NRY4 1499 aa30.98■■■□□ 2.55
CIZ1-206ENST00000372954 GTF3C3Q9Y5Q9 886 aa30.98■■■□□ 2.55
CIZ1-206ENST00000372954 PRDM2Q13029 1718 aa30.97■■■□□ 2.55
CIZ1-206ENST00000372954 IGF1RP08069 1367 aa30.97■■■□□ 2.55
CIZ1-206ENST00000372954 FGD5Q6ZNL6 1462 aa30.94■■■□□ 2.54
CIZ1-206ENST00000372954 FANCD2Q9BXW9 1451 aa30.9■■■□□ 2.54
CIZ1-206ENST00000372954 DNAJC5BQ9UF47 199 aa30.89■■■□□ 2.53
CIZ1-206ENST00000372954 NESP48681 1621 aa30.87■■■□□ 2.53
CIZ1-206ENST00000372954 CARMIL1Q5VZK9 1371 aa30.87■■■□□ 2.53
CIZ1-206ENST00000372954 CENPBP07199 599 aaPredicted RBP30.87■■■□□ 2.53
CIZ1-206ENST00000372954 DHX57Q6P158 1386 aaKnown RBP30.85■■■□□ 2.53
CIZ1-206ENST00000372954 RAD54L2Q9Y4B4 1467 aa30.84■■■□□ 2.53
CIZ1-206ENST00000372954 FAM50AQ14320 339 aaKnown RBP30.75■■■□□ 2.51
CIZ1-206ENST00000372954 CCNB3Q8WWL7 1395 aa30.74■■■□□ 2.51
CIZ1-206ENST00000372954 RRBP1Q9P2E9 1410 aaKnown RBP30.65■■■□□ 2.5
CIZ1-206ENST00000372954 FHOD3Q2V2M9 1422 aa30.64■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms