RNA–Protein interactions for RNA: ENST00000355007.7

PTPA-204, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 5 BASIC

Gene PTPA, Length 2,515 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-204ENST00000355007 NISCHQ9Y2I1 1504 aa37.66■■■■□ 3.62
PTPA-204ENST00000355007 SHROOM4Q9ULL8 1493 aa32.72■■■□□ 2.83
PTPA-204ENST00000355007 HRCP23327 699 aa32.71■■■□□ 2.83
PTPA-204ENST00000355007 SUPT5HO00267 1087 aaKnown RBP32.51■■■□□ 2.79
PTPA-204ENST00000355007 MYO15BQ96JP2 1530 aa32.26■■■□□ 2.75
PTPA-204ENST00000355007 CHIC1Q5VXU3 224 aa32.09■■■□□ 2.73
PTPA-204ENST00000355007 ZCCHC6Q5VYS8 1495 aaKnown RBP32.06■■■□□ 2.72
PTPA-204ENST00000355007 PCGF6Q9BYE7 350 aa32.01■■■□□ 2.71
PTPA-204ENST00000355007 PPARGC1BQ86YN6 1023 aaKnown RBP31.82■■■□□ 2.68
PTPA-204ENST00000355007 DCAF1Q9Y4B6 1507 aa31.72■■■□□ 2.67
PTPA-204ENST00000355007 CCDC180Q9P1Z9 1646 aa31.62■■■□□ 2.65
PTPA-204ENST00000355007 PELP1Q8IZL8 1130 aaKnown RBP31.3■■■□□ 2.6
PTPA-204ENST00000355007 TRIM26Q12899 539 aaPredicted RBP31.23■■■□□ 2.59
PTPA-204ENST00000355007 LOC105371045A0A1W2PR82 267 aa31.15■■■□□ 2.58
PTPA-204ENST00000355007 ZEB1P37275 1124 aaPredicted RBP30.98■■■□□ 2.55
PTPA-204ENST00000355007 DCAF8L2P0C7V8 631 aa30.86■■■□□ 2.53
PTPA-204ENST00000355007 SCAF1Q9H7N4 1312 aaKnown RBP30.71■■■□□ 2.51
PTPA-204ENST00000355007 ABCC9O60706 1549 aa30.46■■■□□ 2.47
PTPA-204ENST00000355007 TRIM41Q8WV44 630 aa30.22■■■□□ 2.43
PTPA-204ENST00000355007 RSF1Q96T23 1441 aaPredicted RBP30.15■■■□□ 2.42
PTPA-204ENST00000355007 ACIN1Q9UKV3 1341 aaKnown RBP30.12■■■□□ 2.41
PTPA-204ENST00000355007 MYT1Q01538 1121 aa30.05■■■□□ 2.4
PTPA-204ENST00000355007 RB1CC1Q8TDY2 1594 aa30.01■■■□□ 2.39
PTPA-204ENST00000355007 FAM9AQ8IZU1 332 aaPredicted RBP29.99■■■□□ 2.39
PTPA-204ENST00000355007 NEUROD1Q13562 356 aa29.96■■■□□ 2.39
PTPA-204ENST00000355007 CENPBP07199 599 aaPredicted RBP29.8■■■□□ 2.36
PTPA-204ENST00000355007 SCRIBQ14160 1630 aa29.77■■■□□ 2.36
PTPA-204ENST00000355007 GTF3C3Q9Y5Q9 886 aa29.76■■■□□ 2.35
PTPA-204ENST00000355007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.75■■■□□ 2.35
PTPA-204ENST00000355007 CCER1Q8TC90 406 aaPredicted RBP29.75■■■□□ 2.35
PTPA-204ENST00000355007 DIEXFQ68CQ4 756 aaKnown RBP29.7■■■□□ 2.35
PTPA-204ENST00000355007 EHMT2Q96KQ7 1210 aa29.69■■■□□ 2.34
PTPA-204ENST00000355007 WRNQ14191 1432 aaPredicted RBP eCLIP29.38■■■□□ 2.291e-6■■□□□ 12
PTPA-204ENST00000355007 MROH2BQ7Z745 1585 aa29.33■■■□□ 2.29
PTPA-204ENST00000355007 CECR2Q9BXF3 1484 aa29.31■■■□□ 2.28
PTPA-204ENST00000355007 EIF4G1Q04637 1599 aaKnown RBP29.29■■■□□ 2.28
PTPA-204ENST00000355007 ZNF316A6NFI3 1004 aaPredicted RBP29.25■■■□□ 2.27
PTPA-204ENST00000355007 WIZO95785 1651 aa29.23■■■□□ 2.27
PTPA-204ENST00000355007 BAZ1AQ9NRL2 1556 aaPredicted RBP29.16■■■□□ 2.26
PTPA-204ENST00000355007 CEP162Q5TB80 1403 aa29.12■■■□□ 2.25
PTPA-204ENST00000355007 YTHDC1Q96MU7 727 aaKnown RBP29.01■■■□□ 2.24
PTPA-204ENST00000355007 TNIKQ9UKE5 1360 aa29.01■■■□□ 2.23
PTPA-204ENST00000355007 TTBK1Q5TCY1 1321 aaPredicted RBP29■■■□□ 2.23
PTPA-204ENST00000355007 NACADO15069 1562 aa28.99■■■□□ 2.23
PTPA-204ENST00000355007 CCDC88BA6NC98 1476 aa28.94■■■□□ 2.22
PTPA-204ENST00000355007 MIER1Q8N108 512 aa28.93■■■□□ 2.22
PTPA-204ENST00000355007 ABCC8Q09428 1581 aa28.9■■■□□ 2.22
PTPA-204ENST00000355007 EEA1Q15075 1411 aa28.84■■■□□ 2.21
PTPA-204ENST00000355007 SOGA1O94964 1423 aa28.8■■■□□ 2.2
PTPA-204ENST00000355007 TOP2AP11388 1531 aaKnown RBP28.79■■■□□ 2.2
PTPA-204ENST00000355007 CSRNP3Q8WYN3 585 aa28.7■■■□□ 2.18
PTPA-204ENST00000355007 GOLGA3Q08378 1498 aa28.69■■■□□ 2.18
PTPA-204ENST00000355007 CLSPNQ9HAW4 1339 aa28.68■■■□□ 2.18
PTPA-204ENST00000355007 SMARCA2P51531 1590 aa28.66■■■□□ 2.18
PTPA-204ENST00000355007 UBTFP17480 764 aaKnown RBP28.65■■■□□ 2.18
PTPA-204ENST00000355007 RUSC2Q8N2Y8 1516 aa28.61■■■□□ 2.17
PTPA-204ENST00000355007 HNRNPUL2Q1KMD3 747 aaKnown RBP28.56■■■□□ 2.16
PTPA-204ENST00000355007 SMARCA4P51532 1647 aa28.51■■■□□ 2.15
PTPA-204ENST00000355007 SUPT16HQ9Y5B9 1047 aaKnown RBP28.46■■■□□ 2.15
PTPA-204ENST00000355007 KIF21BO75037 1637 aa28.43■■■□□ 2.14
PTPA-204ENST00000355007 CEP164Q9UPV0 1460 aa28.43■■■□□ 2.14
PTPA-204ENST00000355007 VPS8Q8N3P4 1428 aa28.4■■■□□ 2.14
PTPA-204ENST00000355007 CLIP1P30622 1438 aa28.38■■■□□ 2.13
PTPA-204ENST00000355007 BAZ1BQ9UIG0 1483 aaKnown RBP28.26■■■□□ 2.11
PTPA-204ENST00000355007 TSHZ2Q9NRE2 1034 aa28.26■■■□□ 2.11
PTPA-204ENST00000355007 ANP32EQ9BTT0 268 aa28.24■■■□□ 2.11
PTPA-204ENST00000355007 APLP2Q06481 763 aa28.23■■■□□ 2.11
PTPA-204ENST00000355007 DHX57Q6P158 1386 aaKnown RBP28.22■■■□□ 2.11
PTPA-204ENST00000355007 SYNJ1O43426 1573 aa28.15■■■□□ 2.1
PTPA-204ENST00000355007 RAPGEF2Q9Y4G8 1499 aa28.07■■■□□ 2.08
PTPA-204ENST00000355007 UNC13AQ9UPW8 1703 aa27.99■■■□□ 2.07
PTPA-204ENST00000355007 PEG3Q9GZU2 1588 aa27.93■■■□□ 2.06
PTPA-204ENST00000355007 BCL11AQ9H165 835 aa27.92■■■□□ 2.06
PTPA-204ENST00000355007 CUX2O14529 1486 aa27.92■■■□□ 2.06
PTPA-204ENST00000355007 RRBP1Q9P2E9 1410 aaKnown RBP27.89■■■□□ 2.05
PTPA-204ENST00000355007 ARAP1Q96P48 1450 aa27.83■■■□□ 2.05
PTPA-204ENST00000355007 ERICH3Q5RHP9 1530 aa27.81■■■□□ 2.04
PTPA-204ENST00000355007 RANGAP1P46060 587 aaPredicted RBP27.8■■■□□ 2.04
PTPA-204ENST00000355007 KCNH8Q96L42 1107 aa27.76■■■□□ 2.03
PTPA-204ENST00000355007 KANK4Q5T7N3 995 aaPredicted RBP27.76■■■□□ 2.03
PTPA-204ENST00000355007 TOP2BQ02880 1626 aa27.73■■■□□ 2.03
PTPA-204ENST00000355007 FKBP8Q14318 412 aa27.71■■■□□ 2.03
PTPA-204ENST00000355007 BCANQ96GW7 911 aa27.71■■■□□ 2.03
PTPA-204ENST00000355007 PRXQ9BXM0 1461 aa27.7■■■□□ 2.02
PTPA-204ENST00000355007 CCNB3Q8WWL7 1395 aa27.68■■■□□ 2.02
PTPA-204ENST00000355007 MAPKBP1O60336 1514 aa27.64■■■□□ 2.02
PTPA-204ENST00000355007 BIVM-ERCC5R4GMW8 1640 aa27.63■■■□□ 2.01
PTPA-204ENST00000355007 RBM19Q9Y4C8 960 aaKnown RBP27.62■■■□□ 2.01
PTPA-204ENST00000355007 NEFLP07196 543 aa27.57■■■□□ 2
PTPA-204ENST00000355007 RAB3GAP2Q9H2M9 1393 aa27.56■■■□□ 2
PTPA-204ENST00000355007 BICRAQ9NZM4 1560 aa27.56■■■□□ 2
PTPA-204ENST00000355007 ATAD2BQ9ULI0 1458 aa27.53■■■□□ 2
PTPA-204ENST00000355007 DDX10Q13206 875 aaKnown RBP27.49■■□□□ 1.99
PTPA-204ENST00000355007 WDR97A6NE52 1622 aa27.49■■□□□ 1.99
PTPA-204ENST00000355007 PPP1R15AO75807 674 aaPredicted RBP27.46■■□□□ 1.99
PTPA-204ENST00000355007 CCER2I3L3R5 266 aa27.45■■□□□ 1.98
PTPA-204ENST00000355007 ARHGAP35Q9NRY4 1499 aa27.43■■□□□ 1.98
PTPA-204ENST00000355007 ITGAEP38570 1179 aa27.43■■□□□ 1.98
PTPA-204ENST00000355007 SETD5Q9C0A6 1442 aa27.41■■□□□ 1.98
PTPA-204ENST00000355007 PABPN1Q86U42 306 aaKnown RBP eCLIP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms