RNA–Protein interactions for RNA: ENST00000361871.7

MSRB1-201, Transcript of methionine sulfoxide reductase B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MSRB1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-201ENST00000361871 NISCHQ9Y2I1 1504 aa50.88■■■■■ 5.73
MSRB1-201ENST00000361871 CCDC180Q9P1Z9 1646 aa45.04■■■■■ 4.8
MSRB1-201ENST00000361871 ABCC9O60706 1549 aa43.72■■■■■ 4.59
MSRB1-201ENST00000361871 ZCCHC6Q5VYS8 1495 aaKnown RBP42.46■■■■■ 4.39
MSRB1-201ENST00000361871 DCAF8L2P0C7V8 631 aa42.32■■■■■ 4.37
MSRB1-201ENST00000361871 NACADO15069 1562 aa42.23■■■■■ 4.35
MSRB1-201ENST00000361871 RB1CC1Q8TDY2 1594 aa42.18■■■■■ 4.34
MSRB1-201ENST00000361871 MYO15BQ96JP2 1530 aa42.1■■■■■ 4.33
MSRB1-201ENST00000361871 DCAF1Q9Y4B6 1507 aa42.09■■■■■ 4.33
MSRB1-201ENST00000361871 UNC13AQ9UPW8 1703 aa41.36■■■■■ 4.21
MSRB1-201ENST00000361871 SCRIBQ14160 1630 aa41.15■■■■■ 4.18
MSRB1-201ENST00000361871 BICRAQ9NZM4 1560 aa40.98■■■■■ 4.15
MSRB1-201ENST00000361871 PABPN1Q86U42 306 aaKnown RBP eCLIP40.93■■■■■ 4.14
MSRB1-201ENST00000361871 SHROOM4Q9ULL8 1493 aa40.45■■■■■ 4.07
MSRB1-201ENST00000361871 DNAJC5BQ9UF47 199 aa39.83■■■■□ 3.97
MSRB1-201ENST00000361871 EIF4G1Q04637 1599 aaKnown RBP39.82■■■■□ 3.97
MSRB1-201ENST00000361871 CECR2Q9BXF3 1484 aa39.63■■■■□ 3.93
MSRB1-201ENST00000361871 CC2D2AQ9P2K1 1620 aa39.57■■■■□ 3.93
MSRB1-201ENST00000361871 SMARCA4P51532 1647 aa39.4■■■■□ 3.9
MSRB1-201ENST00000361871 BAZ1AQ9NRL2 1556 aaPredicted RBP39.37■■■■□ 3.89
MSRB1-201ENST00000361871 MROH2BQ7Z745 1585 aa39.25■■■■□ 3.87
MSRB1-201ENST00000361871 ATAD2BQ9ULI0 1458 aa39.07■■■■□ 3.85
MSRB1-201ENST00000361871 SMARCA2P51531 1590 aa39.01■■■■□ 3.84
MSRB1-201ENST00000361871 PEG3Q9GZU2 1588 aa39■■■■□ 3.83
MSRB1-201ENST00000361871 NCAPD3P42695 1498 aa38.99■■■■□ 3.83
MSRB1-201ENST00000361871 RSF1Q96T23 1441 aaPredicted RBP38.92■■■■□ 3.82
MSRB1-201ENST00000361871 WIZO95785 1651 aa38.86■■■■□ 3.81
MSRB1-201ENST00000361871 HMGXB3Q12766 1538 aa38.82■■■■□ 3.8
MSRB1-201ENST00000361871 BAZ1BQ9UIG0 1483 aaKnown RBP38.75■■■■□ 3.79
MSRB1-201ENST00000361871 TOP2AP11388 1531 aaKnown RBP38.41■■■■□ 3.74
MSRB1-201ENST00000361871 SUPT5HO00267 1087 aaKnown RBP38.21■■■■□ 3.71
MSRB1-201ENST00000361871 CCDC88BA6NC98 1476 aa37.99■■■■□ 3.67
MSRB1-201ENST00000361871 NESP48681 1621 aa37.98■■■■□ 3.67
MSRB1-201ENST00000361871 LAMC3Q9Y6N6 1575 aa37.88■■■■□ 3.65
MSRB1-201ENST00000361871 CADPSQ9ULU8 1353 aa37.86■■■■□ 3.65
MSRB1-201ENST00000361871 CFTRP13569 1480 aa37.73■■■■□ 3.63
MSRB1-201ENST00000361871 ERCC6Q03468 1493 aa37.58■■■■□ 3.61
MSRB1-201ENST00000361871 PDS5BQ9NTI5 1447 aa37.58■■■■□ 3.61
MSRB1-201ENST00000361871 KIF21AQ7Z4S6 1674 aa37.55■■■■□ 3.6
MSRB1-201ENST00000361871 PRDM2Q13029 1718 aa37.52■■■■□ 3.6
MSRB1-201ENST00000361871 FANCD2Q9BXW9 1451 aa37.43■■■■□ 3.58
MSRB1-201ENST00000361871 CEP164Q9UPV0 1460 aa37.33■■■■□ 3.57
MSRB1-201ENST00000361871 THOC2Q8NI27 1593 aaKnown RBP37.3■■■■□ 3.56
MSRB1-201ENST00000361871 MRC2Q9UBG0 1479 aa37.2■■■■□ 3.55
MSRB1-201ENST00000361871 WDR62O43379 1518 aa37.08■■■■□ 3.53
MSRB1-201ENST00000361871 URB2Q14146 1524 aaKnown RBP37.07■■■■□ 3.52
MSRB1-201ENST00000361871 CUX2O14529 1486 aa37.05■■■■□ 3.52
MSRB1-201ENST00000361871 TOPBP1Q92547 1522 aa36.89■■■■□ 3.5
MSRB1-201ENST00000361871 DNMBPQ6XZF7 1577 aa36.87■■■■□ 3.49
MSRB1-201ENST00000361871 ABCC8Q09428 1581 aa36.85■■■■□ 3.49
MSRB1-201ENST00000361871 CUX1P39880 1505 aa36.78■■■■□ 3.48
MSRB1-201ENST00000361871 WRNQ14191 1432 aaPredicted RBP eCLIP36.65■■■■□ 3.46
MSRB1-201ENST00000361871 POLA1P09884 1462 aaPredicted RBP36.61■■■■□ 3.45
MSRB1-201ENST00000361871 SYNJ1O43426 1573 aa36.59■■■■□ 3.45
MSRB1-201ENST00000361871 FGD5Q6ZNL6 1462 aa36.57■■■■□ 3.45
MSRB1-201ENST00000361871 BIVM-ERCC5R4GMW8 1640 aa36.56■■■■□ 3.44
MSRB1-201ENST00000361871 TOP2BQ02880 1626 aa36.55■■■■□ 3.44
MSRB1-201ENST00000361871 IFT140Q96RY7 1462 aa36.53■■■■□ 3.44
MSRB1-201ENST00000361871 TARBP1Q13395 1621 aaKnown RBP36.49■■■■□ 3.43
MSRB1-201ENST00000361871 RAD54L2Q9Y4B4 1467 aa36.47■■■■□ 3.43
MSRB1-201ENST00000361871 SOGA1O94964 1423 aa36.45■■■■□ 3.43
MSRB1-201ENST00000361871 ZNF608Q9ULD9 1512 aaPredicted RBP36.39■■■■□ 3.42
MSRB1-201ENST00000361871 WDR97A6NE52 1622 aa36.29■■■■□ 3.4
MSRB1-201ENST00000361871 EIF4G3O43432 1585 aaKnown RBP36.24■■■■□ 3.39
MSRB1-201ENST00000361871 ABCA10Q8WWZ4 1543 aa36.23■■■■□ 3.39
MSRB1-201ENST00000361871 AQRO60306 1485 aaKnown RBP eCLIP36.23■■■■□ 3.394e-8■■■■■ 64.5
MSRB1-201ENST00000361871 TDRD9Q8NDG6 1382 aaKnown RBP36.21■■■■□ 3.39
MSRB1-201ENST00000361871 ABCA5Q8WWZ7 1642 aa36.08■■■■□ 3.37
MSRB1-201ENST00000361871 TRIM41Q8WV44 630 aa36.04■■■■□ 3.36
MSRB1-201ENST00000361871 GAPVD1Q14C86 1478 aa36.03■■■■□ 3.36
MSRB1-201ENST00000361871 PBRM1Q86U86 1689 aa35.97■■■■□ 3.35
MSRB1-201ENST00000361871 GRIN2BQ13224 1484 aa35.96■■■■□ 3.35
MSRB1-201ENST00000361871 CHIC1Q5VXU3 224 aa35.92■■■■□ 3.34
MSRB1-201ENST00000361871 SNAPC4Q5SXM2 1469 aa35.88■■■■□ 3.33
MSRB1-201ENST00000361871 KIF27Q86VH2 1401 aa35.83■■■■□ 3.33
MSRB1-201ENST00000361871 MAGI1Q96QZ7 1491 aaPredicted RBP35.82■■■■□ 3.32
MSRB1-201ENST00000361871 ERICH3Q5RHP9 1530 aa35.79■■■■□ 3.32
MSRB1-201ENST00000361871 CHD1O14646 1710 aa35.75■■■■□ 3.31
MSRB1-201ENST00000361871 RUSC2Q8N2Y8 1516 aa35.74■■■■□ 3.31
MSRB1-201ENST00000361871 ADAMTS12P58397 1594 aa35.69■■■■□ 3.3
MSRB1-201ENST00000361871 SYNJ2O15056 1496 aa35.69■■■■□ 3.3
MSRB1-201ENST00000361871 IGF1RP08069 1367 aa35.68■■■■□ 3.3
MSRB1-201ENST00000361871 FBLN2P98095 1184 aa35.66■■■■□ 3.3
MSRB1-201ENST00000361871 CHMP7Q8WUX9 453 aaPredicted RBP35.62■■■■□ 3.29
MSRB1-201ENST00000361871 FHAD1B1AJZ9 1412 aa35.62■■■■□ 3.29
MSRB1-201ENST00000361871 OSCARQ8IYS5 282 aa35.6■■■■□ 3.29
MSRB1-201ENST00000361871 CUL7Q14999 1698 aa35.55■■■■□ 3.28
MSRB1-201ENST00000361871 GRIN2AQ12879 1464 aa35.52■■■■□ 3.28
MSRB1-201ENST00000361871 DNAJC5Q9H3Z4 198 aa35.49■■■■□ 3.27
MSRB1-201ENST00000361871 CARMIL1Q5VZK9 1371 aa35.46■■■■□ 3.27
MSRB1-201ENST00000361871 EEA1Q15075 1411 aa35.38■■■■□ 3.26
MSRB1-201ENST00000361871 CEP170Q5SW79 1584 aa35.36■■■■□ 3.25
MSRB1-201ENST00000361871 NUP160Q12769 1436 aa35.34■■■■□ 3.25
MSRB1-201ENST00000361871 CLASP1Q7Z460 1538 aa35.34■■■■□ 3.25
MSRB1-201ENST00000361871 CSRNP3Q8WYN3 585 aa35.33■■■■□ 3.25
MSRB1-201ENST00000361871 FAM9AQ8IZU1 332 aaPredicted RBP35.32■■■■□ 3.25
MSRB1-201ENST00000361871 PRXQ9BXM0 1461 aa35.29■■■■□ 3.24
MSRB1-201ENST00000361871 RAPGEF2Q9Y4G8 1499 aa35.29■■■■□ 3.24
MSRB1-201ENST00000361871 KIAA0586Q9BVV6 1533 aa35.09■■■■□ 3.21
MSRB1-201ENST00000361871 SHROOM2Q13796 1616 aa35.06■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms