RNA–Protein interactions for RNA: ENST00000544396.5

GRAMD2B-219, Transcript of GRAM domain containing 2B, humanhuman

TSL 2 BASIC

Gene GRAMD2B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-219ENST00000544396 NISCHQ9Y2I1 1504 aa36.88■■■■□ 3.49
GRAMD2B-219ENST00000544396 SHROOM4Q9ULL8 1493 aa32.51■■■□□ 2.8
GRAMD2B-219ENST00000544396 SUPT5HO00267 1087 aaKnown RBP32.21■■■□□ 2.75
GRAMD2B-219ENST00000544396 HRCP23327 699 aa31.72■■■□□ 2.67
GRAMD2B-219ENST00000544396 MYO15BQ96JP2 1530 aa31.58■■■□□ 2.65
GRAMD2B-219ENST00000544396 CHIC1Q5VXU3 224 aa31.48■■■□□ 2.63
GRAMD2B-219ENST00000544396 PCGF6Q9BYE7 350 aa31.4■■■□□ 2.62
GRAMD2B-219ENST00000544396 ZCCHC6Q5VYS8 1495 aaKnown RBP31.29■■■□□ 2.6
GRAMD2B-219ENST00000544396 PPARGC1BQ86YN6 1023 aaKnown RBP31.25■■■□□ 2.59
GRAMD2B-219ENST00000544396 DCAF8L2P0C7V8 631 aa30.98■■■□□ 2.55
GRAMD2B-219ENST00000544396 PELP1Q8IZL8 1130 aaKnown RBP30.93■■■□□ 2.54
GRAMD2B-219ENST00000544396 LOC105371045A0A1W2PR82 267 aa30.81■■■□□ 2.52
GRAMD2B-219ENST00000544396 CCDC180Q9P1Z9 1646 aa30.68■■■□□ 2.5
GRAMD2B-219ENST00000544396 DCAF1Q9Y4B6 1507 aa30.63■■■□□ 2.49
GRAMD2B-219ENST00000544396 TRIM26Q12899 539 aaPredicted RBP30.39■■■□□ 2.46
GRAMD2B-219ENST00000544396 SCAF1Q9H7N4 1312 aaKnown RBP30.11■■■□□ 2.41
GRAMD2B-219ENST00000544396 ZEB1P37275 1124 aaPredicted RBP29.89■■■□□ 2.38
GRAMD2B-219ENST00000544396 FAM9AQ8IZU1 332 aaPredicted RBP29.83■■■□□ 2.37
GRAMD2B-219ENST00000544396 MYT1Q01538 1121 aa29.81■■■□□ 2.36
GRAMD2B-219ENST00000544396 TRIM41Q8WV44 630 aa29.77■■■□□ 2.36
GRAMD2B-219ENST00000544396 EHMT2Q96KQ7 1210 aa29.76■■■□□ 2.35
GRAMD2B-219ENST00000544396 ABCC9O60706 1549 aa29.62■■■□□ 2.33
GRAMD2B-219ENST00000544396 RSF1Q96T23 1441 aaPredicted RBP29.6■■■□□ 2.33
GRAMD2B-219ENST00000544396 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.3
GRAMD2B-219ENST00000544396 SCRIBQ14160 1630 aa29.34■■■□□ 2.29
GRAMD2B-219ENST00000544396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.28■■■□□ 2.28
GRAMD2B-219ENST00000544396 NEUROD1Q13562 356 aa29.19■■■□□ 2.26
GRAMD2B-219ENST00000544396 ACIN1Q9UKV3 1341 aaKnown RBP29.17■■■□□ 2.26
GRAMD2B-219ENST00000544396 CCER1Q8TC90 406 aaPredicted RBP29.14■■■□□ 2.26
GRAMD2B-219ENST00000544396 GTF3C3Q9Y5Q9 886 aa28.98■■■□□ 2.23
GRAMD2B-219ENST00000544396 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
GRAMD2B-219ENST00000544396 DIEXFQ68CQ4 756 aaKnown RBP28.94■■■□□ 2.22
GRAMD2B-219ENST00000544396 TTBK1Q5TCY1 1321 aaPredicted RBP28.94■■■□□ 2.22
GRAMD2B-219ENST00000544396 MROH2BQ7Z745 1585 aa28.85■■■□□ 2.21
GRAMD2B-219ENST00000544396 CENPBP07199 599 aaPredicted RBP28.78■■■□□ 2.2
GRAMD2B-219ENST00000544396 WIZO95785 1651 aa28.71■■■□□ 2.19
GRAMD2B-219ENST00000544396 YTHDC1Q96MU7 727 aaKnown RBP28.51■■■□□ 2.16
GRAMD2B-219ENST00000544396 ZNF316A6NFI3 1004 aaPredicted RBP28.47■■■□□ 2.15
GRAMD2B-219ENST00000544396 WRNQ14191 1432 aaPredicted RBP eCLIP28.47■■■□□ 2.15
GRAMD2B-219ENST00000544396 CEP162Q5TB80 1403 aa28.47■■■□□ 2.15
GRAMD2B-219ENST00000544396 CCDC88BA6NC98 1476 aa28.46■■■□□ 2.15
GRAMD2B-219ENST00000544396 EIF4G1Q04637 1599 aaKnown RBP28.45■■■□□ 2.15
GRAMD2B-219ENST00000544396 ABCC8Q09428 1581 aa28.44■■■□□ 2.14
GRAMD2B-219ENST00000544396 BAZ1AQ9NRL2 1556 aaPredicted RBP28.38■■■□□ 2.13
GRAMD2B-219ENST00000544396 SOGA1O94964 1423 aa28.37■■■□□ 2.13
GRAMD2B-219ENST00000544396 NACADO15069 1562 aa28.34■■■□□ 2.13
GRAMD2B-219ENST00000544396 UBTFP17480 764 aaKnown RBP28.31■■■□□ 2.12
GRAMD2B-219ENST00000544396 MIER1Q8N108 512 aa28.31■■■□□ 2.12
GRAMD2B-219ENST00000544396 TNIKQ9UKE5 1360 aa28.28■■■□□ 2.12
GRAMD2B-219ENST00000544396 RUSC2Q8N2Y8 1516 aa28.23■■■□□ 2.11
GRAMD2B-219ENST00000544396 CSRNP3Q8WYN3 585 aa28.22■■■□□ 2.11
GRAMD2B-219ENST00000544396 HNRNPUL2Q1KMD3 747 aaKnown RBP28.22■■■□□ 2.11
GRAMD2B-219ENST00000544396 BCL11AQ9H165 835 aa28.11■■■□□ 2.09
GRAMD2B-219ENST00000544396 TOP2AP11388 1531 aaKnown RBP28.09■■■□□ 2.09
GRAMD2B-219ENST00000544396 SMARCA2P51531 1590 aa28.03■■■□□ 2.08
GRAMD2B-219ENST00000544396 GOLGA3Q08378 1498 aa27.96■■■□□ 2.07
GRAMD2B-219ENST00000544396 EEA1Q15075 1411 aa27.96■■■□□ 2.07
GRAMD2B-219ENST00000544396 SMARCA4P51532 1647 aa27.89■■■□□ 2.06
GRAMD2B-219ENST00000544396 RANGAP1P46060 587 aaPredicted RBP27.84■■■□□ 2.05
GRAMD2B-219ENST00000544396 CLIP1P30622 1438 aa27.78■■■□□ 2.04
GRAMD2B-219ENST00000544396 ANP32EQ9BTT0 268 aa27.73■■■□□ 2.03
GRAMD2B-219ENST00000544396 APLP2Q06481 763 aa27.72■■■□□ 2.03
GRAMD2B-219ENST00000544396 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.02
GRAMD2B-219ENST00000544396 VPS8Q8N3P4 1428 aa27.68■■■□□ 2.02
GRAMD2B-219ENST00000544396 SUPT16HQ9Y5B9 1047 aaKnown RBP27.65■■■□□ 2.02
GRAMD2B-219ENST00000544396 SYNJ1O43426 1573 aa27.58■■■□□ 2.01
GRAMD2B-219ENST00000544396 PABPN1Q86U42 306 aaKnown RBP eCLIP27.58■■■□□ 2.01
GRAMD2B-219ENST00000544396 RAPGEF2Q9Y4G8 1499 aa27.57■■■□□ 2
GRAMD2B-219ENST00000544396 KIF21BO75037 1637 aa27.56■■■□□ 2
GRAMD2B-219ENST00000544396 DHX57Q6P158 1386 aaKnown RBP27.54■■■□□ 2
GRAMD2B-219ENST00000544396 TSHZ2Q9NRE2 1034 aa27.45■■□□□ 1.98
GRAMD2B-219ENST00000544396 KANK4Q5T7N3 995 aaPredicted RBP27.42■■□□□ 1.98
GRAMD2B-219ENST00000544396 UNC13AQ9UPW8 1703 aa27.41■■□□□ 1.98
GRAMD2B-219ENST00000544396 BAZ1BQ9UIG0 1483 aaKnown RBP27.4■■□□□ 1.98
GRAMD2B-219ENST00000544396 CLSPNQ9HAW4 1339 aa27.4■■□□□ 1.98
GRAMD2B-219ENST00000544396 KCNH8Q96L42 1107 aa27.37■■□□□ 1.97
GRAMD2B-219ENST00000544396 PRKCSHP14314 528 aaPredicted RBP27.35■■□□□ 1.97
GRAMD2B-219ENST00000544396 ITGAEP38570 1179 aa27.26■■□□□ 1.95
GRAMD2B-219ENST00000544396 BCANQ96GW7 911 aa27.23■■□□□ 1.95
GRAMD2B-219ENST00000544396 ARAP1Q96P48 1450 aa27.22■■□□□ 1.95
GRAMD2B-219ENST00000544396 PEG3Q9GZU2 1588 aa27.16■■□□□ 1.94
GRAMD2B-219ENST00000544396 BICRAQ9NZM4 1560 aa27.14■■□□□ 1.93
GRAMD2B-219ENST00000544396 RRBP1Q9P2E9 1410 aaKnown RBP27.11■■□□□ 1.93
GRAMD2B-219ENST00000544396 ATAD2BQ9ULI0 1458 aa27.1■■□□□ 1.93
GRAMD2B-219ENST00000544396 PRXQ9BXM0 1461 aa27.07■■□□□ 1.92
GRAMD2B-219ENST00000544396 CCNB3Q8WWL7 1395 aa27.06■■□□□ 1.92
GRAMD2B-219ENST00000544396 FKBP8Q14318 412 aa27.05■■□□□ 1.92
GRAMD2B-219ENST00000544396 TOP2BQ02880 1626 aa27.04■■□□□ 1.92
GRAMD2B-219ENST00000544396 DDX10Q13206 875 aaKnown RBP27.02■■□□□ 1.92
GRAMD2B-219ENST00000544396 CUX2O14529 1486 aa26.99■■□□□ 1.91
GRAMD2B-219ENST00000544396 RAB3GAP2Q9H2M9 1393 aa26.98■■□□□ 1.91
GRAMD2B-219ENST00000544396 ERICH3Q5RHP9 1530 aa26.98■■□□□ 1.91
GRAMD2B-219ENST00000544396 SIN3AQ96ST3 1273 aa26.94■■□□□ 1.9
GRAMD2B-219ENST00000544396 MAPKBP1O60336 1514 aa26.92■■□□□ 1.9
GRAMD2B-219ENST00000544396 HIRIP3Q9BW71 556 aaPredicted RBP26.91■■□□□ 1.9
GRAMD2B-219ENST00000544396 ARHGAP35Q9NRY4 1499 aa26.87■■□□□ 1.89
GRAMD2B-219ENST00000544396 BIVM-ERCC5R4GMW8 1640 aa26.84■■□□□ 1.89
GRAMD2B-219ENST00000544396 TRIM52Q96A61 297 aa26.84■■□□□ 1.89
GRAMD2B-219ENST00000544396 WDR97A6NE52 1622 aa26.82■■□□□ 1.88
GRAMD2B-219ENST00000544396 RBM19Q9Y4C8 960 aaKnown RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms