RNA–Protein interactions for RNA: ENST00000435214.1

KRT18P11-201, Transcript of keratin 18 pseudogene 11, humanhuman

BASIC

Gene KRT18P11, Length 1,283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P11-201ENST00000435214 NISCHQ9Y2I1 1504 aa51.73■■■■■ 5.87
KRT18P11-201ENST00000435214 CCDC180Q9P1Z9 1646 aa46.25■■■■■ 4.99
KRT18P11-201ENST00000435214 ABCC9O60706 1549 aa45.45■■■■■ 4.87
KRT18P11-201ENST00000435214 RB1CC1Q8TDY2 1594 aa43.71■■■■■ 4.59
KRT18P11-201ENST00000435214 NACADO15069 1562 aa43.58■■■■■ 4.57
KRT18P11-201ENST00000435214 DCAF8L2P0C7V8 631 aa43.31■■■■■ 4.52
KRT18P11-201ENST00000435214 MYO15BQ96JP2 1530 aa43.26■■■■■ 4.52
KRT18P11-201ENST00000435214 ZCCHC6Q5VYS8 1495 aaKnown RBP43■■■■■ 4.47
KRT18P11-201ENST00000435214 DCAF1Q9Y4B6 1507 aa42.88■■■■■ 4.46
KRT18P11-201ENST00000435214 UNC13AQ9UPW8 1703 aa42.57■■■■■ 4.41
KRT18P11-201ENST00000435214 PABPN1Q86U42 306 aaKnown RBP eCLIP42.36■■■■■ 4.37
KRT18P11-201ENST00000435214 BICRAQ9NZM4 1560 aa42.26■■■■■ 4.36
KRT18P11-201ENST00000435214 SHROOM4Q9ULL8 1493 aa42.04■■■■■ 4.32
KRT18P11-201ENST00000435214 SCRIBQ14160 1630 aa42.01■■■■■ 4.32
KRT18P11-201ENST00000435214 DNAJC5BQ9UF47 199 aa41.97■■■■■ 4.31
KRT18P11-201ENST00000435214 EIF4G1Q04637 1599 aaKnown RBP41.25■■■■■ 4.19
KRT18P11-201ENST00000435214 CC2D2AQ9P2K1 1620 aa41.15■■■■■ 4.18
KRT18P11-201ENST00000435214 CECR2Q9BXF3 1484 aa40.96■■■■■ 4.15
KRT18P11-201ENST00000435214 SMARCA4P51532 1647 aa40.21■■■■■ 4.03
KRT18P11-201ENST00000435214 NCAPD3P42695 1498 aa40.19■■■■■ 4.02
KRT18P11-201ENST00000435214 BAZ1AQ9NRL2 1556 aaPredicted RBP40.18■■■■■ 4.02
KRT18P11-201ENST00000435214 SMARCA2P51531 1590 aa40.12■■■■■ 4.01
KRT18P11-201ENST00000435214 ATAD2BQ9ULI0 1458 aa40.1■■■■■ 4.01
KRT18P11-201ENST00000435214 HMGXB3Q12766 1538 aa39.97■■■■□ 3.99
KRT18P11-201ENST00000435214 PEG3Q9GZU2 1588 aa39.89■■■■□ 3.98
KRT18P11-201ENST00000435214 MROH2BQ7Z745 1585 aa39.77■■■■□ 3.96
KRT18P11-201ENST00000435214 BAZ1BQ9UIG0 1483 aaKnown RBP39.77■■■■□ 3.96
KRT18P11-201ENST00000435214 WIZO95785 1651 aa39.32■■■■□ 3.88
KRT18P11-201ENST00000435214 ERCC6Q03468 1493 aa39.31■■■■□ 3.88
KRT18P11-201ENST00000435214 RSF1Q96T23 1441 aaPredicted RBP39.22■■■■□ 3.87
KRT18P11-201ENST00000435214 LAMC3Q9Y6N6 1575 aa39.21■■■■□ 3.87
KRT18P11-201ENST00000435214 NESP48681 1621 aa39.17■■■■□ 3.86
KRT18P11-201ENST00000435214 CUX2O14529 1486 aa39.1■■■■□ 3.85
KRT18P11-201ENST00000435214 PDS5BQ9NTI5 1447 aa38.98■■■■□ 3.83
KRT18P11-201ENST00000435214 CADPSQ9ULU8 1353 aa38.98■■■■□ 3.83
KRT18P11-201ENST00000435214 TOP2AP11388 1531 aaKnown RBP38.97■■■■□ 3.83
KRT18P11-201ENST00000435214 KIF21AQ7Z4S6 1674 aa38.76■■■■□ 3.8
KRT18P11-201ENST00000435214 THOC2Q8NI27 1593 aaKnown RBP38.75■■■■□ 3.79
KRT18P11-201ENST00000435214 CFTRP13569 1480 aa38.66■■■■□ 3.78
KRT18P11-201ENST00000435214 MRC2Q9UBG0 1479 aa38.54■■■■□ 3.76
KRT18P11-201ENST00000435214 CEP164Q9UPV0 1460 aa38.53■■■■□ 3.76
KRT18P11-201ENST00000435214 FANCD2Q9BXW9 1451 aa38.5■■■■□ 3.75
KRT18P11-201ENST00000435214 CCDC88BA6NC98 1476 aa38.47■■■■□ 3.75
KRT18P11-201ENST00000435214 WDR62O43379 1518 aa38.43■■■■□ 3.74
KRT18P11-201ENST00000435214 PRDM2Q13029 1718 aa38.37■■■■□ 3.73
KRT18P11-201ENST00000435214 DNAJC5Q9H3Z4 198 aa38.27■■■■□ 3.72
KRT18P11-201ENST00000435214 URB2Q14146 1524 aaKnown RBP38.07■■■■□ 3.69
KRT18P11-201ENST00000435214 ABCC8Q09428 1581 aa37.96■■■■□ 3.67
KRT18P11-201ENST00000435214 SUPT5HO00267 1087 aaKnown RBP37.88■■■■□ 3.65
KRT18P11-201ENST00000435214 TOPBP1Q92547 1522 aa37.83■■■■□ 3.65
KRT18P11-201ENST00000435214 DNMBPQ6XZF7 1577 aa37.8■■■■□ 3.64
KRT18P11-201ENST00000435214 IFT140Q96RY7 1462 aa37.76■■■■□ 3.63
KRT18P11-201ENST00000435214 POLA1P09884 1462 aaPredicted RBP37.48■■■■□ 3.59
KRT18P11-201ENST00000435214 ZNF608Q9ULD9 1512 aaPredicted RBP37.47■■■■□ 3.59
KRT18P11-201ENST00000435214 TARBP1Q13395 1621 aaKnown RBP37.43■■■■□ 3.58
KRT18P11-201ENST00000435214 OSCARQ8IYS5 282 aa37.39■■■■□ 3.58
KRT18P11-201ENST00000435214 EIF4G3O43432 1585 aaKnown RBP37.38■■■■□ 3.57
KRT18P11-201ENST00000435214 CUX1P39880 1505 aa37.36■■■■□ 3.57
KRT18P11-201ENST00000435214 SOGA1O94964 1423 aa37.34■■■■□ 3.57
KRT18P11-201ENST00000435214 FGD5Q6ZNL6 1462 aa37.33■■■■□ 3.57
KRT18P11-201ENST00000435214 WDR97A6NE52 1622 aa37.29■■■■□ 3.56
KRT18P11-201ENST00000435214 RAD54L2Q9Y4B4 1467 aa37.25■■■■□ 3.55
KRT18P11-201ENST00000435214 AQRO60306 1485 aaKnown RBP eCLIP37.24■■■■□ 3.55
KRT18P11-201ENST00000435214 TDRD9Q8NDG6 1382 aaKnown RBP37.11■■■■□ 3.53
KRT18P11-201ENST00000435214 WRNQ14191 1432 aaPredicted RBP eCLIP37.05■■■■□ 3.52
KRT18P11-201ENST00000435214 ABCA10Q8WWZ4 1543 aa37■■■■□ 3.51
KRT18P11-201ENST00000435214 TOP2BQ02880 1626 aa37■■■■□ 3.51
KRT18P11-201ENST00000435214 BIVM-ERCC5R4GMW8 1640 aa36.99■■■■□ 3.51
KRT18P11-201ENST00000435214 GRIN2BQ13224 1484 aa36.99■■■■□ 3.51
KRT18P11-201ENST00000435214 MAGI1Q96QZ7 1491 aaPredicted RBP36.96■■■■□ 3.51
KRT18P11-201ENST00000435214 CHD1O14646 1710 aa36.96■■■■□ 3.51
KRT18P11-201ENST00000435214 GAPVD1Q14C86 1478 aa36.92■■■■□ 3.5
KRT18P11-201ENST00000435214 SNAPC4Q5SXM2 1469 aa36.92■■■■□ 3.5
KRT18P11-201ENST00000435214 FBLN2P98095 1184 aa36.91■■■■□ 3.5
KRT18P11-201ENST00000435214 SYNJ1O43426 1573 aa36.88■■■■□ 3.49
KRT18P11-201ENST00000435214 ABCA5Q8WWZ7 1642 aa36.85■■■■□ 3.49
KRT18P11-201ENST00000435214 PBRM1Q86U86 1689 aa36.83■■■■□ 3.49
KRT18P11-201ENST00000435214 CHMP7Q8WUX9 453 aaPredicted RBP36.81■■■■□ 3.48
KRT18P11-201ENST00000435214 SYNJ2O15056 1496 aa36.79■■■■□ 3.48
KRT18P11-201ENST00000435214 TRIM41Q8WV44 630 aa36.77■■■■□ 3.48
KRT18P11-201ENST00000435214 RIMBP3CA6NJZ7 1639 aa36.73■■■■□ 3.47
KRT18P11-201ENST00000435214 RIMBP3BA6NNM3 1639 aa36.73■■■■□ 3.47
KRT18P11-201ENST00000435214 RIMBP3Q9UFD9 1639 aa36.73■■■■□ 3.47
KRT18P11-201ENST00000435214 ARHGEF11O15085 1522 aa36.71■■■■□ 3.47
KRT18P11-201ENST00000435214 ERICH3Q5RHP9 1530 aa36.59■■■■□ 3.45
KRT18P11-201ENST00000435214 CLASP1Q7Z460 1538 aa36.59■■■■□ 3.45
KRT18P11-201ENST00000435214 ADAMTS12P58397 1594 aa36.53■■■■□ 3.44
KRT18P11-201ENST00000435214 FHAD1B1AJZ9 1412 aa36.5■■■■□ 3.43
KRT18P11-201ENST00000435214 GRIN2AQ12879 1464 aa36.48■■■■□ 3.43
KRT18P11-201ENST00000435214 CYB5RLQ6IPT4 315 aa36.37■■■■□ 3.41
KRT18P11-201ENST00000435214 KIF27Q86VH2 1401 aa36.35■■■■□ 3.41
KRT18P11-201ENST00000435214 ARAP1Q96P48 1450 aa36.35■■■■□ 3.41
KRT18P11-201ENST00000435214 NUP160Q12769 1436 aa36.34■■■■□ 3.41
KRT18P11-201ENST00000435214 CEP170Q5SW79 1584 aa36.25■■■■□ 3.39
KRT18P11-201ENST00000435214 CUL7Q14999 1698 aa36.19■■■■□ 3.38
KRT18P11-201ENST00000435214 IGF1RP08069 1367 aa36.17■■■■□ 3.38
KRT18P11-201ENST00000435214 SHROOM2Q13796 1616 aa36.11■■■■□ 3.37
KRT18P11-201ENST00000435214 CARMIL1Q5VZK9 1371 aa35.99■■■■□ 3.35
KRT18P11-201ENST00000435214 RUSC2Q8N2Y8 1516 aa35.98■■■■□ 3.35
KRT18P11-201ENST00000435214 JPH4Q96JJ6 628 aa35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms