Protein–RNA interactions for Protein: Q9H322

VCX2, Variable charge X-linked protein 2, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX2Q9H322 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCX2Q9H322 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VCX2Q9H322 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
VCX2Q9H322 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
VCX2Q9H322 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX2Q9H322 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX2Q9H322 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VCX2Q9H322 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX2Q9H322 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX2Q9H322 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCX2Q9H322 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.74■□□□□ 0.59
VCX2Q9H322 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCX2Q9H322 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
VCX2Q9H322 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC18.74■□□□□ 0.59
VCX2Q9H322 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCX2Q9H322 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.73■□□□□ 0.59
VCX2Q9H322 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.72■□□□□ 0.59
VCX2Q9H322 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX2Q9H322 ST7-AS1-201ENST00000456775 1889 ntBASIC18.72■□□□□ 0.59
VCX2Q9H322 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.72■□□□□ 0.59
VCX2Q9H322 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCX2Q9H322 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCX2Q9H322 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VCX2Q9H322 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCX2Q9H322 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.7■□□□□ 0.58
VCX2Q9H322 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCX2Q9H322 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCX2Q9H322 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.69■□□□□ 0.58
VCX2Q9H322 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VCX2Q9H322 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
VCX2Q9H322 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.67■□□□□ 0.58
VCX2Q9H322 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VCX2Q9H322 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.66■□□□□ 0.58
VCX2Q9H322 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VCX2Q9H322 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VCX2Q9H322 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
VCX2Q9H322 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VCX2Q9H322 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX2Q9H322 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VCX2Q9H322 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VCX2Q9H322 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCX2Q9H322 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.62■□□□□ 0.57
VCX2Q9H322 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VCX2Q9H322 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VCX2Q9H322 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
VCX2Q9H322 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
VCX2Q9H322 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.6■□□□□ 0.57
VCX2Q9H322 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VCX2Q9H322 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.6■□□□□ 0.57
VCX2Q9H322 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCX2Q9H322 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VCX2Q9H322 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VCX2Q9H322 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
VCX2Q9H322 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
VCX2Q9H322 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VCX2Q9H322 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VCX2Q9H322 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VCX2Q9H322 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
VCX2Q9H322 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
VCX2Q9H322 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VCX2Q9H322 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VCX2Q9H322 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
VCX2Q9H322 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VCX2Q9H322 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX2Q9H322 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX2Q9H322 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX2Q9H322 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VCX2Q9H322 AC142086.6-201ENST00000621154 1765 ntBASIC18.57■□□□□ 0.56
VCX2Q9H322 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX2Q9H322 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VCX2Q9H322 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX2Q9H322 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.56■□□□□ 0.56
VCX2Q9H322 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX2Q9H322 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX2Q9H322 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX2Q9H322 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.55■□□□□ 0.56
VCX2Q9H322 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.55■□□□□ 0.56
VCX2Q9H322 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VCX2Q9H322 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX2Q9H322 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX2Q9H322 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX2Q9H322 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.54■□□□□ 0.56
VCX2Q9H322 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.54■□□□□ 0.56
VCX2Q9H322 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VCX2Q9H322 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX2Q9H322 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC18.53■□□□□ 0.56
VCX2Q9H322 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX2Q9H322 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.52■□□□□ 0.56
VCX2Q9H322 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.52■□□□□ 0.56
VCX2Q9H322 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
VCX2Q9H322 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VCX2Q9H322 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.5■□□□□ 0.55
VCX2Q9H322 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.5■□□□□ 0.55
VCX2Q9H322 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VCX2Q9H322 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VCX2Q9H322 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VCX2Q9H322 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VCX2Q9H322 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VCX2Q9H322 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VCX2Q9H322 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms