Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11BQ8TCY0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11BQ8TCY0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SMIM11BQ8TCY0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11BQ8TCY0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11BQ8TCY0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM11BQ8TCY0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SMIM11BQ8TCY0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM11BQ8TCY0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM11BQ8TCY0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SMIM11BQ8TCY0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
SMIM11BQ8TCY0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC17.32■□□□□ 0.36
SMIM11BQ8TCY0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SMIM11BQ8TCY0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM11BQ8TCY0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.31■□□□□ 0.36
SMIM11BQ8TCY0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM11BQ8TCY0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM11BQ8TCY0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM11BQ8TCY0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM11BQ8TCY0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11BQ8TCY0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11BQ8TCY0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11BQ8TCY0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11BQ8TCY0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11BQ8TCY0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SMIM11BQ8TCY0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11BQ8TCY0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11BQ8TCY0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11BQ8TCY0 AC135731.1-201ENST00000569415 2548 ntBASIC17.28■□□□□ 0.36
SMIM11BQ8TCY0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11BQ8TCY0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11BQ8TCY0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11BQ8TCY0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SMIM11BQ8TCY0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11BQ8TCY0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11BQ8TCY0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM11BQ8TCY0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC17.26■□□□□ 0.35
SMIM11BQ8TCY0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM11BQ8TCY0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
SMIM11BQ8TCY0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SMIM11BQ8TCY0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM11BQ8TCY0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC17.25■□□□□ 0.35
SMIM11BQ8TCY0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM11BQ8TCY0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.25■□□□□ 0.35
SMIM11BQ8TCY0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM11BQ8TCY0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMIM11BQ8TCY0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM11BQ8TCY0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMIM11BQ8TCY0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.23■□□□□ 0.35
SMIM11BQ8TCY0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMIM11BQ8TCY0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMIM11BQ8TCY0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM11BQ8TCY0 AL121749.1-202ENST00000609313 2153 ntBASIC17.22■□□□□ 0.35
SMIM11BQ8TCY0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM11BQ8TCY0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC17.22■□□□□ 0.35
SMIM11BQ8TCY0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM11BQ8TCY0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM11BQ8TCY0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SMIM11BQ8TCY0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11BQ8TCY0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11BQ8TCY0 AC015813.7-201ENST00000623294 581 ntBASIC17.21■□□□□ 0.35
SMIM11BQ8TCY0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11BQ8TCY0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.2■□□□□ 0.34
SMIM11BQ8TCY0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.2■□□□□ 0.34
SMIM11BQ8TCY0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.2■□□□□ 0.34
SMIM11BQ8TCY0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM11BQ8TCY0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM11BQ8TCY0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.19■□□□□ 0.34
SMIM11BQ8TCY0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMIM11BQ8TCY0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMIM11BQ8TCY0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SMIM11BQ8TCY0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMIM11BQ8TCY0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMIM11BQ8TCY0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM11BQ8TCY0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM11BQ8TCY0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM11BQ8TCY0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SMIM11BQ8TCY0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11BQ8TCY0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11BQ8TCY0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SMIM11BQ8TCY0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM11BQ8TCY0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM11BQ8TCY0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM11BQ8TCY0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SMIM11BQ8TCY0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM11BQ8TCY0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMIM11BQ8TCY0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11BQ8TCY0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11BQ8TCY0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SMIM11BQ8TCY0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SMIM11BQ8TCY0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SMIM11BQ8TCY0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SMIM11BQ8TCY0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMIM11BQ8TCY0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11BQ8TCY0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC17.12■□□□□ 0.33
SMIM11BQ8TCY0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11BQ8TCY0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11BQ8TCY0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11BQ8TCY0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11BQ8TCY0 AL135925.1-201ENST00000605920 1701 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms