Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC9CQ8N5M4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC9CQ8N5M4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
TTC9CQ8N5M4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC9CQ8N5M4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.99■□□□□ 0.95
TTC9CQ8N5M4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC9CQ8N5M4 CAHM-201ENST00000604200 896 ntBASIC20.98■□□□□ 0.95
TTC9CQ8N5M4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TTC9CQ8N5M4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TTC9CQ8N5M4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC9CQ8N5M4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TTC9CQ8N5M4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TTC9CQ8N5M4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.96■□□□□ 0.95
TTC9CQ8N5M4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.96■□□□□ 0.95
TTC9CQ8N5M4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.96■□□□□ 0.95
TTC9CQ8N5M4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TTC9CQ8N5M4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC9CQ8N5M4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC9CQ8N5M4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TTC9CQ8N5M4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.94■□□□□ 0.94
TTC9CQ8N5M4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC9CQ8N5M4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.94■□□□□ 0.94
TTC9CQ8N5M4 ABCB10P1-201ENST00000614297 2181 ntBASIC20.94■□□□□ 0.94
TTC9CQ8N5M4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.93■□□□□ 0.94
TTC9CQ8N5M4 AL135925.1-201ENST00000605920 1701 ntBASIC20.92■□□□□ 0.94
TTC9CQ8N5M4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.92■□□□□ 0.94
TTC9CQ8N5M4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC9CQ8N5M4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC9CQ8N5M4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC9CQ8N5M4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TTC9CQ8N5M4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC9CQ8N5M4 ST7-AS1-201ENST00000456775 1889 ntBASIC20.9■□□□□ 0.94
TTC9CQ8N5M4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC9CQ8N5M4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC9CQ8N5M4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TTC9CQ8N5M4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.9■□□□□ 0.94
TTC9CQ8N5M4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC9CQ8N5M4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC9CQ8N5M4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TTC9CQ8N5M4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC9CQ8N5M4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC9CQ8N5M4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC9CQ8N5M4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC9CQ8N5M4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC9CQ8N5M4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC9CQ8N5M4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC9CQ8N5M4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC9CQ8N5M4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TTC9CQ8N5M4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.85■□□□□ 0.93
TTC9CQ8N5M4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.85■□□□□ 0.93
TTC9CQ8N5M4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.85■□□□□ 0.93
TTC9CQ8N5M4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TTC9CQ8N5M4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TTC9CQ8N5M4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TTC9CQ8N5M4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
TTC9CQ8N5M4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TTC9CQ8N5M4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC9CQ8N5M4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TTC9CQ8N5M4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TTC9CQ8N5M4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TTC9CQ8N5M4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TTC9CQ8N5M4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TTC9CQ8N5M4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TTC9CQ8N5M4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TTC9CQ8N5M4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
TTC9CQ8N5M4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TTC9CQ8N5M4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.8■□□□□ 0.92
TTC9CQ8N5M4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TTC9CQ8N5M4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TTC9CQ8N5M4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TTC9CQ8N5M4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.79■□□□□ 0.92
TTC9CQ8N5M4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TTC9CQ8N5M4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TTC9CQ8N5M4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.78■□□□□ 0.92
TTC9CQ8N5M4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TTC9CQ8N5M4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TTC9CQ8N5M4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TTC9CQ8N5M4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC9CQ8N5M4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
TTC9CQ8N5M4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC9CQ8N5M4 SUZ12P1-203ENST00000578195 985 ntBASIC20.76■□□□□ 0.91
TTC9CQ8N5M4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TTC9CQ8N5M4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.75■□□□□ 0.91
TTC9CQ8N5M4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TTC9CQ8N5M4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TTC9CQ8N5M4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC9CQ8N5M4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC9CQ8N5M4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC9CQ8N5M4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC9CQ8N5M4 AC010864.1-201ENST00000609407 1511 ntBASIC20.73■□□□□ 0.91
TTC9CQ8N5M4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC9CQ8N5M4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TTC9CQ8N5M4 MIR762-201ENST00000390236 83 ntBASIC20.72■□□□□ 0.91
TTC9CQ8N5M4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.72■□□□□ 0.91
TTC9CQ8N5M4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC9CQ8N5M4 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.71■□□□□ 0.91
TTC9CQ8N5M4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TTC9CQ8N5M4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TTC9CQ8N5M4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TTC9CQ8N5M4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms