Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TTC39CQ8N584 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TTC39CQ8N584 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.48■■■□□ 2.15
TTC39CQ8N584 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.47■■■□□ 2.15
TTC39CQ8N584 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
TTC39CQ8N584 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.46■■■□□ 2.15
TTC39CQ8N584 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
TTC39CQ8N584 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
TTC39CQ8N584 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
TTC39CQ8N584 AP006261.1-201ENST00000584783 668 ntBASIC28.45■■■□□ 2.14
TTC39CQ8N584 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
TTC39CQ8N584 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
TTC39CQ8N584 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TTC39CQ8N584 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
TTC39CQ8N584 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.43■■■□□ 2.14
TTC39CQ8N584 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.43■■■□□ 2.14
TTC39CQ8N584 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TTC39CQ8N584 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
TTC39CQ8N584 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.42■■■□□ 2.14
TTC39CQ8N584 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.42■■■□□ 2.14
TTC39CQ8N584 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TTC39CQ8N584 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
TTC39CQ8N584 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
TTC39CQ8N584 AC005559.1-201ENST00000589661 871 ntBASIC28.4■■■□□ 2.14
TTC39CQ8N584 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TTC39CQ8N584 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.4■■■□□ 2.14
TTC39CQ8N584 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TTC39CQ8N584 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.39■■■□□ 2.14
TTC39CQ8N584 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.39■■■□□ 2.14
TTC39CQ8N584 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
TTC39CQ8N584 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
TTC39CQ8N584 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
TTC39CQ8N584 MIR3665-201ENST00000578708 105 ntBASIC28.37■■■□□ 2.13
TTC39CQ8N584 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.37■■■□□ 2.13
TTC39CQ8N584 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TTC39CQ8N584 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
TTC39CQ8N584 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.35■■■□□ 2.13
TTC39CQ8N584 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TTC39CQ8N584 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TTC39CQ8N584 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TTC39CQ8N584 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
TTC39CQ8N584 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.31■■■□□ 2.12
TTC39CQ8N584 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.31■■■□□ 2.12
TTC39CQ8N584 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
TTC39CQ8N584 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
TTC39CQ8N584 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
TTC39CQ8N584 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.28■■■□□ 2.12
TTC39CQ8N584 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TTC39CQ8N584 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.28■■■□□ 2.12
TTC39CQ8N584 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TTC39CQ8N584 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TTC39CQ8N584 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TTC39CQ8N584 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TTC39CQ8N584 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TTC39CQ8N584 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.27■■■□□ 2.12
TTC39CQ8N584 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TTC39CQ8N584 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.26■■■□□ 2.11
TTC39CQ8N584 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
TTC39CQ8N584 DUX4L28-201ENST00000623687 678 ntBASIC28.26■■■□□ 2.11
TTC39CQ8N584 AL135925.1-201ENST00000605920 1701 ntBASIC28.25■■■□□ 2.11
TTC39CQ8N584 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TTC39CQ8N584 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.24■■■□□ 2.11
TTC39CQ8N584 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
TTC39CQ8N584 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TTC39CQ8N584 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.22■■■□□ 2.11
TTC39CQ8N584 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TTC39CQ8N584 AL162393.1-201ENST00000437852 946 ntBASIC28.21■■■□□ 2.11
TTC39CQ8N584 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.11
TTC39CQ8N584 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TTC39CQ8N584 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.2■■■□□ 2.1
TTC39CQ8N584 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TTC39CQ8N584 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TTC39CQ8N584 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TTC39CQ8N584 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.18■■■□□ 2.1
TTC39CQ8N584 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
TTC39CQ8N584 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TTC39CQ8N584 AC010864.1-201ENST00000609407 1511 ntBASIC28.17■■■□□ 2.1
TTC39CQ8N584 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TTC39CQ8N584 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TTC39CQ8N584 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.16■■■□□ 2.1
TTC39CQ8N584 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
TTC39CQ8N584 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
TTC39CQ8N584 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TTC39CQ8N584 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TTC39CQ8N584 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TTC39CQ8N584 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.13■■■□□ 2.09
TTC39CQ8N584 AC087741.3-201ENST00000624270 1347 ntBASIC28.13■■■□□ 2.09
TTC39CQ8N584 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TTC39CQ8N584 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.12■■■□□ 2.09
TTC39CQ8N584 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TTC39CQ8N584 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TTC39CQ8N584 ST7-AS1-201ENST00000456775 1889 ntBASIC28.11■■■□□ 2.09
TTC39CQ8N584 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TTC39CQ8N584 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TTC39CQ8N584 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TTC39CQ8N584 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
TTC39CQ8N584 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TTC39CQ8N584 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.1■■■□□ 2.09
TTC39CQ8N584 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.1■■■□□ 2.09
TTC39CQ8N584 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms