Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
DDX60Q8IY21 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
DDX60Q8IY21 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
DDX60Q8IY21 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC33.63■■■□□ 2.97
DDX60Q8IY21 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC33.62■■■□□ 2.97
DDX60Q8IY21 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
DDX60Q8IY21 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC33.59■■■□□ 2.97
DDX60Q8IY21 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
DDX60Q8IY21 ZNRF2P2-203ENST00000454624 420 ntBASIC33.57■■■□□ 2.96
DDX60Q8IY21 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
DDX60Q8IY21 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
DDX60Q8IY21 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
DDX60Q8IY21 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
DDX60Q8IY21 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
DDX60Q8IY21 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC33.53■■■□□ 2.96
DDX60Q8IY21 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
DDX60Q8IY21 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC33.51■■■□□ 2.96
DDX60Q8IY21 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC33.51■■■□□ 2.96
DDX60Q8IY21 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
DDX60Q8IY21 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
DDX60Q8IY21 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
DDX60Q8IY21 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
DDX60Q8IY21 MBP-237ENST00000579129 1052 ntTSL 5 BASIC33.5■■■□□ 2.95
DDX60Q8IY21 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC33.5■■■□□ 2.95
DDX60Q8IY21 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC33.49■■■□□ 2.95
DDX60Q8IY21 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC33.48■■■□□ 2.95
DDX60Q8IY21 DUX4L29-201ENST00000425409 679 ntBASIC33.48■■■□□ 2.95
DDX60Q8IY21 MIR6090-201ENST00000622481 60 ntBASIC33.48■■■□□ 2.95
DDX60Q8IY21 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC33.48■■■□□ 2.95
DDX60Q8IY21 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC33.48■■■□□ 2.95
DDX60Q8IY21 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC33.47■■■□□ 2.95
DDX60Q8IY21 AC108673.1-201ENST00000510422 1159 ntBASIC33.47■■■□□ 2.95
DDX60Q8IY21 RPS2-202ENST00000526522 924 ntTSL 2 BASIC33.47■■■□□ 2.95
DDX60Q8IY21 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
DDX60Q8IY21 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
DDX60Q8IY21 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC33.45■■■□□ 2.95
DDX60Q8IY21 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC33.45■■■□□ 2.94
DDX60Q8IY21 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC33.45■■■□□ 2.94
DDX60Q8IY21 AC021231.2-201ENST00000594613 730 ntBASIC33.45■■■□□ 2.94
DDX60Q8IY21 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC33.44■■■□□ 2.94
DDX60Q8IY21 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC33.44■■■□□ 2.94
DDX60Q8IY21 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC33.43■■■□□ 2.94
DDX60Q8IY21 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC33.42■■■□□ 2.94
DDX60Q8IY21 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC33.42■■■□□ 2.94
DDX60Q8IY21 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC33.42■■■□□ 2.94
DDX60Q8IY21 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
DDX60Q8IY21 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
DDX60Q8IY21 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC33.39■■■□□ 2.94
DDX60Q8IY21 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC33.39■■■□□ 2.93
DDX60Q8IY21 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
DDX60Q8IY21 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC33.38■■■□□ 2.93
DDX60Q8IY21 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC33.38■■■□□ 2.93
DDX60Q8IY21 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC33.38■■■□□ 2.93
DDX60Q8IY21 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
DDX60Q8IY21 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC33.36■■■□□ 2.93
DDX60Q8IY21 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
DDX60Q8IY21 CIB2-204ENST00000557846 934 ntTSL 3 BASIC33.36■■■□□ 2.93
DDX60Q8IY21 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
DDX60Q8IY21 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC33.34■■■□□ 2.93
DDX60Q8IY21 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC33.33■■■□□ 2.93
DDX60Q8IY21 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
DDX60Q8IY21 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC33.32■■■□□ 2.92
DDX60Q8IY21 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
DDX60Q8IY21 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC33.29■■■□□ 2.92
DDX60Q8IY21 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC33.29■■■□□ 2.92
DDX60Q8IY21 MACF1-219ENST00000484793 834 ntTSL 2 BASIC33.28■■■□□ 2.92
DDX60Q8IY21 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
DDX60Q8IY21 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC33.27■■■□□ 2.92
DDX60Q8IY21 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC33.26■■■□□ 2.92
DDX60Q8IY21 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
DDX60Q8IY21 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
DDX60Q8IY21 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
DDX60Q8IY21 CR559946.2-201ENST00000623684 991 ntBASIC33.25■■■□□ 2.91
DDX60Q8IY21 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC33.24■■■□□ 2.91
DDX60Q8IY21 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
DDX60Q8IY21 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC33.24■■■□□ 2.91
DDX60Q8IY21 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
DDX60Q8IY21 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
DDX60Q8IY21 RNF166-209ENST00000567844 633 ntTSL 5 BASIC33.22■■■□□ 2.91
DDX60Q8IY21 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
DDX60Q8IY21 GDI1-215ENST00000630693 786 ntTSL 4 BASIC33.21■■■□□ 2.91
DDX60Q8IY21 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
DDX60Q8IY21 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
DDX60Q8IY21 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC33.19■■■□□ 2.9
DDX60Q8IY21 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
DDX60Q8IY21 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC33.19■■■□□ 2.9
DDX60Q8IY21 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC33.18■■■□□ 2.9
DDX60Q8IY21 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC33.17■■■□□ 2.9
DDX60Q8IY21 AC016575.1-201ENST00000607026 382 ntBASIC33.16■■■□□ 2.9
DDX60Q8IY21 MIR3648-2-201ENST00000581792 180 ntBASIC33.16■■■□□ 2.9
DDX60Q8IY21 MIR3648-1-201ENST00000615959 180 ntBASIC33.16■■■□□ 2.9
DDX60Q8IY21 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
DDX60Q8IY21 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
DDX60Q8IY21 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
DDX60Q8IY21 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC33.14■■■□□ 2.9
DDX60Q8IY21 MIR4449-201ENST00000578365 66 ntBASIC33.14■■■□□ 2.9
DDX60Q8IY21 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
DDX60Q8IY21 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
DDX60Q8IY21 LINC01971-201ENST00000617888 1048 ntBASIC33.13■■■□□ 2.89
DDX60Q8IY21 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms