Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS13BQ7Z7G8 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VPS13BQ7Z7G8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS13BQ7Z7G8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS13BQ7Z7G8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
VPS13BQ7Z7G8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS13BQ7Z7G8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC16.83■□□□□ 0.28
VPS13BQ7Z7G8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
VPS13BQ7Z7G8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS13BQ7Z7G8 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS13BQ7Z7G8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS13BQ7Z7G8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC16.81■□□□□ 0.28
VPS13BQ7Z7G8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC16.81■□□□□ 0.28
VPS13BQ7Z7G8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
VPS13BQ7Z7G8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.81■□□□□ 0.28
VPS13BQ7Z7G8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS13BQ7Z7G8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS13BQ7Z7G8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS13BQ7Z7G8 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.79■□□□□ 0.28
VPS13BQ7Z7G8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS13BQ7Z7G8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS13BQ7Z7G8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS13BQ7Z7G8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS13BQ7Z7G8 MIR6090-201ENST00000622481 60 ntBASIC16.77■□□□□ 0.28
VPS13BQ7Z7G8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS13BQ7Z7G8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13BQ7Z7G8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13BQ7Z7G8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13BQ7Z7G8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS13BQ7Z7G8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.75■□□□□ 0.27
VPS13BQ7Z7G8 LINC01971-201ENST00000617888 1048 ntBASIC16.75■□□□□ 0.27
VPS13BQ7Z7G8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS13BQ7Z7G8 RARRES2P2-201ENST00000394842 485 ntBASIC16.74■□□□□ 0.27
VPS13BQ7Z7G8 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS13BQ7Z7G8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS13BQ7Z7G8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS13BQ7Z7G8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC16.73■□□□□ 0.27
VPS13BQ7Z7G8 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS13BQ7Z7G8 DUX4L11-201ENST00000611504 1267 ntBASIC16.73■□□□□ 0.27
VPS13BQ7Z7G8 DUX4L12-201ENST00000614593 1267 ntBASIC16.73■□□□□ 0.27
VPS13BQ7Z7G8 DUX4L14-201ENST00000621227 1267 ntBASIC16.73■□□□□ 0.27
VPS13BQ7Z7G8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS13BQ7Z7G8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS13BQ7Z7G8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS13BQ7Z7G8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC16.72■□□□□ 0.27
VPS13BQ7Z7G8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS13BQ7Z7G8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS13BQ7Z7G8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13BQ7Z7G8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13BQ7Z7G8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VPS13BQ7Z7G8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
VPS13BQ7Z7G8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.69■□□□□ 0.26
VPS13BQ7Z7G8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13BQ7Z7G8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13BQ7Z7G8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VPS13BQ7Z7G8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 DUX4L13-201ENST00000554103 1267 ntBASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 DUX4L15-201ENST00000611059 1267 ntBASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 DUX4L23-201ENST00000615195 1269 ntBASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 DUX4L24-201ENST00000617576 1269 ntBASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 DUX4L22-201ENST00000618238 1269 ntBASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 DUX4L20-201ENST00000619712 1269 ntBASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 DUX4L21-201ENST00000622058 1269 ntBASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 DUX4L10-201ENST00000622460 1267 ntBASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 DUX4L25-201ENST00000624915 1269 ntBASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VPS13BQ7Z7G8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.67■□□□□ 0.26
VPS13BQ7Z7G8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
VPS13BQ7Z7G8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.67■□□□□ 0.26
VPS13BQ7Z7G8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
VPS13BQ7Z7G8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.67■□□□□ 0.26
VPS13BQ7Z7G8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC16.66■□□□□ 0.26
VPS13BQ7Z7G8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.66■□□□□ 0.26
VPS13BQ7Z7G8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13BQ7Z7G8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13BQ7Z7G8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13BQ7Z7G8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
VPS13BQ7Z7G8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13BQ7Z7G8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VPS13BQ7Z7G8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS13BQ7Z7G8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS13BQ7Z7G8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC16.64■□□□□ 0.25
VPS13BQ7Z7G8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS13BQ7Z7G8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS13BQ7Z7G8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC16.63■□□□□ 0.25
VPS13BQ7Z7G8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS13BQ7Z7G8 AC108673.1-201ENST00000510422 1159 ntBASIC16.62■□□□□ 0.25
VPS13BQ7Z7G8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS13BQ7Z7G8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS13BQ7Z7G8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS13BQ7Z7G8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS13BQ7Z7G8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VPS13BQ7Z7G8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VPS13BQ7Z7G8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms