Protein–RNA interactions for Protein: Q76KD6

SPATC1, Speriolin, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPATC1Q76KD6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.9■■□□□ 1.42
SPATC1Q76KD6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
SPATC1Q76KD6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SPATC1Q76KD6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SPATC1Q76KD6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.89■■□□□ 1.42
SPATC1Q76KD6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.42
SPATC1Q76KD6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SPATC1Q76KD6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SPATC1Q76KD6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SPATC1Q76KD6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.87■■□□□ 1.41
SPATC1Q76KD6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SPATC1Q76KD6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SPATC1Q76KD6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SPATC1Q76KD6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
SPATC1Q76KD6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SPATC1Q76KD6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SPATC1Q76KD6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
SPATC1Q76KD6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.85■■□□□ 1.41
SPATC1Q76KD6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SPATC1Q76KD6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SPATC1Q76KD6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPATC1Q76KD6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPATC1Q76KD6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SPATC1Q76KD6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
SPATC1Q76KD6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.81■■□□□ 1.4
SPATC1Q76KD6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.81■■□□□ 1.4
SPATC1Q76KD6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SPATC1Q76KD6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.8■■□□□ 1.4
SPATC1Q76KD6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.8■■□□□ 1.4
SPATC1Q76KD6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPATC1Q76KD6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPATC1Q76KD6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SPATC1Q76KD6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.78■■□□□ 1.4
SPATC1Q76KD6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.78■■□□□ 1.4
SPATC1Q76KD6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPATC1Q76KD6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPATC1Q76KD6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPATC1Q76KD6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPATC1Q76KD6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
SPATC1Q76KD6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SPATC1Q76KD6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.76■■□□□ 1.39
SPATC1Q76KD6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
SPATC1Q76KD6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
SPATC1Q76KD6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SPATC1Q76KD6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SPATC1Q76KD6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
SPATC1Q76KD6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SPATC1Q76KD6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.72■■□□□ 1.39
SPATC1Q76KD6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SPATC1Q76KD6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SPATC1Q76KD6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SPATC1Q76KD6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SPATC1Q76KD6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SPATC1Q76KD6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.7■■□□□ 1.38
SPATC1Q76KD6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
SPATC1Q76KD6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SPATC1Q76KD6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.69■■□□□ 1.38
SPATC1Q76KD6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SPATC1Q76KD6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SPATC1Q76KD6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
SPATC1Q76KD6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SPATC1Q76KD6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
SPATC1Q76KD6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
SPATC1Q76KD6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPATC1Q76KD6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPATC1Q76KD6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SPATC1Q76KD6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SPATC1Q76KD6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SPATC1Q76KD6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SPATC1Q76KD6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SPATC1Q76KD6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SPATC1Q76KD6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SPATC1Q76KD6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SPATC1Q76KD6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.62■■□□□ 1.37
SPATC1Q76KD6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPATC1Q76KD6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SPATC1Q76KD6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.6■■□□□ 1.37
SPATC1Q76KD6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.6■■□□□ 1.37
SPATC1Q76KD6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SPATC1Q76KD6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.59■■□□□ 1.37
SPATC1Q76KD6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SPATC1Q76KD6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.59■■□□□ 1.37
SPATC1Q76KD6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.59■■□□□ 1.37
SPATC1Q76KD6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SPATC1Q76KD6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SPATC1Q76KD6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
SPATC1Q76KD6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SPATC1Q76KD6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPATC1Q76KD6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.57■■□□□ 1.36
SPATC1Q76KD6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SPATC1Q76KD6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
SPATC1Q76KD6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
SPATC1Q76KD6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
SPATC1Q76KD6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.56■■□□□ 1.36
SPATC1Q76KD6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.56■■□□□ 1.36
SPATC1Q76KD6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SPATC1Q76KD6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SPATC1Q76KD6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SPATC1Q76KD6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SPATC1Q76KD6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms