Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.51■■■□□ 2.79
PDS5AQ29RF7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.51■■■□□ 2.79
PDS5AQ29RF7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
PDS5AQ29RF7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PDS5AQ29RF7 ABHD17AP4-201ENST00000411545 909 ntBASIC32.46■■■□□ 2.79
PDS5AQ29RF7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
PDS5AQ29RF7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
PDS5AQ29RF7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PDS5AQ29RF7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.44■■■□□ 2.78
PDS5AQ29RF7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
PDS5AQ29RF7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PDS5AQ29RF7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.44■■■□□ 2.78
PDS5AQ29RF7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
PDS5AQ29RF7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.43■■■□□ 2.78
PDS5AQ29RF7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
PDS5AQ29RF7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
PDS5AQ29RF7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.41■■■□□ 2.78
PDS5AQ29RF7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.41■■■□□ 2.78
PDS5AQ29RF7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
PDS5AQ29RF7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
PDS5AQ29RF7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
PDS5AQ29RF7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
PDS5AQ29RF7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PDS5AQ29RF7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.39■■■□□ 2.78
PDS5AQ29RF7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PDS5AQ29RF7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC32.38■■■□□ 2.77
PDS5AQ29RF7 AC108673.1-201ENST00000510422 1159 ntBASIC32.37■■■□□ 2.77
PDS5AQ29RF7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
PDS5AQ29RF7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.36■■■□□ 2.77
PDS5AQ29RF7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.36■■■□□ 2.77
PDS5AQ29RF7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PDS5AQ29RF7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PDS5AQ29RF7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PDS5AQ29RF7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PDS5AQ29RF7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
PDS5AQ29RF7 MIR6090-201ENST00000622481 60 ntBASIC32.31■■■□□ 2.76
PDS5AQ29RF7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.31■■■□□ 2.76
PDS5AQ29RF7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.3■■■□□ 2.76
PDS5AQ29RF7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
PDS5AQ29RF7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32.3■■■□□ 2.76
PDS5AQ29RF7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PDS5AQ29RF7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PDS5AQ29RF7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PDS5AQ29RF7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
PDS5AQ29RF7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.27■■■□□ 2.76
PDS5AQ29RF7 MIR7108-201ENST00000614319 87 ntBASIC32.27■■■□□ 2.76
PDS5AQ29RF7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
PDS5AQ29RF7 DUX4L29-201ENST00000425409 679 ntBASIC32.26■■■□□ 2.75
PDS5AQ29RF7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
PDS5AQ29RF7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
PDS5AQ29RF7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.25■■■□□ 2.75
PDS5AQ29RF7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.25■■■□□ 2.75
PDS5AQ29RF7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC32.24■■■□□ 2.75
PDS5AQ29RF7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.23■■■□□ 2.75
PDS5AQ29RF7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
PDS5AQ29RF7 AL161658.1-201ENST00000623641 1967 ntBASIC32.23■■■□□ 2.75
PDS5AQ29RF7 ZNRF2P2-203ENST00000454624 420 ntBASIC32.23■■■□□ 2.75
PDS5AQ29RF7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC32.23■■■□□ 2.75
PDS5AQ29RF7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
PDS5AQ29RF7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PDS5AQ29RF7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PDS5AQ29RF7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.22■■■□□ 2.75
PDS5AQ29RF7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
PDS5AQ29RF7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC32.21■■■□□ 2.75
PDS5AQ29RF7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
PDS5AQ29RF7 AC021231.2-201ENST00000594613 730 ntBASIC32.21■■■□□ 2.75
PDS5AQ29RF7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
PDS5AQ29RF7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
PDS5AQ29RF7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC32.2■■■□□ 2.74
PDS5AQ29RF7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PDS5AQ29RF7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
PDS5AQ29RF7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PDS5AQ29RF7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.19■■■□□ 2.74
PDS5AQ29RF7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
PDS5AQ29RF7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PDS5AQ29RF7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PDS5AQ29RF7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
PDS5AQ29RF7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
PDS5AQ29RF7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
PDS5AQ29RF7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
PDS5AQ29RF7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
PDS5AQ29RF7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.16■■■□□ 2.74
PDS5AQ29RF7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
PDS5AQ29RF7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.15■■■□□ 2.74
PDS5AQ29RF7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC32.15■■■□□ 2.74
PDS5AQ29RF7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
PDS5AQ29RF7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
PDS5AQ29RF7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.73
PDS5AQ29RF7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.11■■■□□ 2.73
PDS5AQ29RF7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
PDS5AQ29RF7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
PDS5AQ29RF7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PDS5AQ29RF7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
PDS5AQ29RF7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.07■■■□□ 2.72
PDS5AQ29RF7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.05■■■□□ 2.72
PDS5AQ29RF7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.05■■■□□ 2.72
PDS5AQ29RF7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
PDS5AQ29RF7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
PDS5AQ29RF7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PDS5AQ29RF7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.03■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms