Protein–RNA interactions for Protein: P55774

CCL18, C-C motif chemokine 18, humanhuman

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18P55774 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL18P55774 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCL18P55774 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCL18P55774 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.63■□□□□ 0.57
CCL18P55774 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL18P55774 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCL18P55774 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.63■□□□□ 0.57
CCL18P55774 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL18P55774 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL18P55774 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL18P55774 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCL18P55774 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL18P55774 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.61■□□□□ 0.57
CCL18P55774 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.61■□□□□ 0.57
CCL18P55774 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.61■□□□□ 0.57
CCL18P55774 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCL18P55774 AC044849.2-201ENST00000606596 710 ntBASIC18.6■□□□□ 0.57
CCL18P55774 DUX4L28-201ENST00000623687 678 ntBASIC18.6■□□□□ 0.57
CCL18P55774 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCL18P55774 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCL18P55774 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCL18P55774 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCL18P55774 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCL18P55774 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.57■□□□□ 0.56
CCL18P55774 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
CCL18P55774 AC087741.3-201ENST00000624270 1347 ntBASIC18.56■□□□□ 0.56
CCL18P55774 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL18P55774 AC120057.4-201ENST00000624722 1615 ntBASIC18.56■□□□□ 0.56
CCL18P55774 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL18P55774 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCL18P55774 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.55■□□□□ 0.56
CCL18P55774 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCL18P55774 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCL18P55774 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCL18P55774 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL18P55774 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.54■□□□□ 0.56
CCL18P55774 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
CCL18P55774 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.53■□□□□ 0.56
CCL18P55774 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL18P55774 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.52■□□□□ 0.55
CCL18P55774 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CCL18P55774 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCL18P55774 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCL18P55774 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCL18P55774 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.51■□□□□ 0.55
CCL18P55774 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCL18P55774 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCL18P55774 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCL18P55774 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCL18P55774 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCL18P55774 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL18P55774 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCL18P55774 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL18P55774 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.49■□□□□ 0.55
CCL18P55774 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL18P55774 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.49■□□□□ 0.55
CCL18P55774 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCL18P55774 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCL18P55774 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCL18P55774 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.47■□□□□ 0.55
CCL18P55774 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CCL18P55774 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCL18P55774 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCL18P55774 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCL18P55774 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCL18P55774 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.45■□□□□ 0.54
CCL18P55774 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCL18P55774 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCL18P55774 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCL18P55774 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.45■□□□□ 0.54
CCL18P55774 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.45■□□□□ 0.54
CCL18P55774 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCL18P55774 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCL18P55774 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCL18P55774 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCL18P55774 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCL18P55774 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCL18P55774 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCL18P55774 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCL18P55774 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCL18P55774 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCL18P55774 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCL18P55774 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCL18P55774 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL18P55774 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL18P55774 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL18P55774 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.4■□□□□ 0.54
CCL18P55774 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCL18P55774 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL18P55774 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCL18P55774 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.39■□□□□ 0.53
CCL18P55774 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCL18P55774 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL18P55774 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCL18P55774 AC108673.1-201ENST00000510422 1159 ntBASIC18.38■□□□□ 0.53
CCL18P55774 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCL18P55774 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL18P55774 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL18P55774 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.37■□□□□ 0.53
CCL18P55774 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms