Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CHGBP05060 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.35■■■□□ 2.77
CHGBP05060 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CHGBP05060 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.34■■■□□ 2.77
CHGBP05060 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
CHGBP05060 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC32.32■■■□□ 2.76
CHGBP05060 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.32■■■□□ 2.76
CHGBP05060 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CHGBP05060 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CHGBP05060 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC32.3■■■□□ 2.76
CHGBP05060 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CHGBP05060 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.29■■■□□ 2.76
CHGBP05060 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CHGBP05060 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CHGBP05060 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC32.28■■■□□ 2.76
CHGBP05060 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CHGBP05060 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC32.27■■■□□ 2.76
CHGBP05060 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CHGBP05060 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
CHGBP05060 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CHGBP05060 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CHGBP05060 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
CHGBP05060 AC005559.1-201ENST00000589661 871 ntBASIC32.25■■■□□ 2.75
CHGBP05060 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CHGBP05060 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
CHGBP05060 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHGBP05060 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CHGBP05060 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
CHGBP05060 ST7-202ENST00000323984 2142 ntTSL 5 BASIC32.22■■■□□ 2.75
CHGBP05060 ST7-207ENST00000393449 2127 ntTSL 5 BASIC32.22■■■□□ 2.75
CHGBP05060 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CHGBP05060 AP006261.1-201ENST00000584783 668 ntBASIC32.22■■■□□ 2.75
CHGBP05060 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CHGBP05060 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CHGBP05060 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CHGBP05060 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.21■■■□□ 2.75
CHGBP05060 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CHGBP05060 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.2■■■□□ 2.75
CHGBP05060 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.2■■■□□ 2.74
CHGBP05060 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.74
CHGBP05060 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CHGBP05060 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
CHGBP05060 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.19■■■□□ 2.74
CHGBP05060 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC32.19■■■□□ 2.74
CHGBP05060 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CHGBP05060 AC087741.3-201ENST00000624270 1347 ntBASIC32.17■■■□□ 2.74
CHGBP05060 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CHGBP05060 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
CHGBP05060 MIR3665-201ENST00000578708 105 ntBASIC32.14■■■□□ 2.74
CHGBP05060 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CHGBP05060 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
CHGBP05060 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.13■■■□□ 2.73
CHGBP05060 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CHGBP05060 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CHGBP05060 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
CHGBP05060 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32.09■■■□□ 2.73
CHGBP05060 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
CHGBP05060 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CHGBP05060 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CHGBP05060 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CHGBP05060 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CHGBP05060 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.07■■■□□ 2.72
CHGBP05060 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
CHGBP05060 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CHGBP05060 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
CHGBP05060 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CHGBP05060 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
CHGBP05060 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CHGBP05060 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CHGBP05060 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CHGBP05060 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CHGBP05060 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.03■■■□□ 2.72
CHGBP05060 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.02■■■□□ 2.72
CHGBP05060 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
CHGBP05060 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.01■■■□□ 2.71
CHGBP05060 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
CHGBP05060 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32■■■□□ 2.71
CHGBP05060 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CHGBP05060 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CHGBP05060 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
CHGBP05060 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CHGBP05060 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CHGBP05060 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.99■■■□□ 2.71
CHGBP05060 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.99■■■□□ 2.71
CHGBP05060 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.99■■■□□ 2.71
CHGBP05060 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.99■■■□□ 2.71
CHGBP05060 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CHGBP05060 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.98■■■□□ 2.71
CHGBP05060 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CHGBP05060 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CHGBP05060 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CHGBP05060 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
CHGBP05060 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CHGBP05060 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.7
CHGBP05060 AL135925.1-201ENST00000605920 1701 ntBASIC31.95■■■□□ 2.7
CHGBP05060 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.94■■■□□ 2.7
CHGBP05060 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CHGBP05060 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.94■■■□□ 2.7
CHGBP05060 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.94■■■□□ 2.7
CHGBP05060 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.94■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms