Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRACP01848 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRACP01848 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRACP01848 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRACP01848 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC17.47■□□□□ 0.39
TRACP01848 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRACP01848 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRACP01848 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.47■□□□□ 0.39
TRACP01848 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRACP01848 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRACP01848 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRACP01848 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRACP01848 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.46■□□□□ 0.39
TRACP01848 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.46■□□□□ 0.39
TRACP01848 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRACP01848 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRACP01848 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.44■□□□□ 0.38
TRACP01848 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRACP01848 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRACP01848 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.44■□□□□ 0.38
TRACP01848 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRACP01848 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRACP01848 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRACP01848 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRACP01848 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRACP01848 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRACP01848 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRACP01848 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRACP01848 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRACP01848 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC17.41■□□□□ 0.38
TRACP01848 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRACP01848 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.4■□□□□ 0.38
TRACP01848 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRACP01848 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRACP01848 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRACP01848 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRACP01848 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRACP01848 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRACP01848 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRACP01848 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRACP01848 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRACP01848 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRACP01848 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRACP01848 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRACP01848 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRACP01848 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRACP01848 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRACP01848 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRACP01848 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRACP01848 ST7-AS1-201ENST00000456775 1889 ntBASIC17.33■□□□□ 0.37
TRACP01848 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRACP01848 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRACP01848 AL121749.1-202ENST00000609313 2153 ntBASIC17.33■□□□□ 0.36
TRACP01848 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRACP01848 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRACP01848 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRACP01848 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRACP01848 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRACP01848 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRACP01848 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRACP01848 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRACP01848 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRACP01848 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRACP01848 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.3■□□□□ 0.36
TRACP01848 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRACP01848 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRACP01848 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.29■□□□□ 0.36
TRACP01848 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRACP01848 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC17.29■□□□□ 0.36
TRACP01848 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRACP01848 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRACP01848 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRACP01848 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRACP01848 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.28■□□□□ 0.36
TRACP01848 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRACP01848 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRACP01848 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.27■□□□□ 0.35
TRACP01848 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TRACP01848 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRACP01848 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRACP01848 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRACP01848 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRACP01848 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRACP01848 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRACP01848 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRACP01848 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.25■□□□□ 0.35
TRACP01848 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRACP01848 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRACP01848 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRACP01848 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRACP01848 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRACP01848 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRACP01848 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRACP01848 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRACP01848 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRACP01848 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRACP01848 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRACP01848 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRACP01848 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRACP01848 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms