Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNRNP200O75643 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
SNRNP200O75643 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNRNP200O75643 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SNRNP200O75643 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
SNRNP200O75643 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNRNP200O75643 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.73■■□□□ 1.71
SNRNP200O75643 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SNRNP200O75643 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
SNRNP200O75643 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNRNP200O75643 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.72■■□□□ 1.71
SNRNP200O75643 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SNRNP200O75643 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.72■■□□□ 1.71
SNRNP200O75643 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SNRNP200O75643 AP006261.1-201ENST00000584783 668 ntBASIC25.72■■□□□ 1.71
SNRNP200O75643 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNRNP200O75643 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.71■■□□□ 1.71
SNRNP200O75643 AC044849.2-201ENST00000606596 710 ntBASIC25.7■■□□□ 1.71
SNRNP200O75643 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SNRNP200O75643 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SNRNP200O75643 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNRNP200O75643 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SNRNP200O75643 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SNRNP200O75643 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.68■■□□□ 1.7
SNRNP200O75643 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.68■■□□□ 1.7
SNRNP200O75643 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.68■■□□□ 1.7
SNRNP200O75643 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.67■■□□□ 1.7
SNRNP200O75643 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SNRNP200O75643 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
SNRNP200O75643 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
SNRNP200O75643 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
SNRNP200O75643 AC087741.3-201ENST00000624270 1347 ntBASIC25.66■■□□□ 1.7
SNRNP200O75643 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.65■■□□□ 1.7
SNRNP200O75643 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SNRNP200O75643 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
SNRNP200O75643 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
SNRNP200O75643 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNRNP200O75643 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNRNP200O75643 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNRNP200O75643 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNRNP200O75643 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNRNP200O75643 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNRNP200O75643 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.61■■□□□ 1.69
SNRNP200O75643 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SNRNP200O75643 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNRNP200O75643 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNRNP200O75643 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SNRNP200O75643 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNRNP200O75643 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNRNP200O75643 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.59■■□□□ 1.69
SNRNP200O75643 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SNRNP200O75643 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SNRNP200O75643 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
SNRNP200O75643 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.58■■□□□ 1.69
SNRNP200O75643 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SNRNP200O75643 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.57■■□□□ 1.68
SNRNP200O75643 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SNRNP200O75643 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SNRNP200O75643 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SNRNP200O75643 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.56■■□□□ 1.68
SNRNP200O75643 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SNRNP200O75643 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SNRNP200O75643 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SNRNP200O75643 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
SNRNP200O75643 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
SNRNP200O75643 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.55■■□□□ 1.68
SNRNP200O75643 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.53■■□□□ 1.68
SNRNP200O75643 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SNRNP200O75643 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
SNRNP200O75643 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.52■■□□□ 1.68
SNRNP200O75643 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.51■■□□□ 1.67
SNRNP200O75643 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.51■■□□□ 1.67
SNRNP200O75643 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNRNP200O75643 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.49■■□□□ 1.67
SNRNP200O75643 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SNRNP200O75643 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNRNP200O75643 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNRNP200O75643 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SNRNP200O75643 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNRNP200O75643 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SNRNP200O75643 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SNRNP200O75643 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNRNP200O75643 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SNRNP200O75643 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.47■■□□□ 1.67
SNRNP200O75643 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SNRNP200O75643 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNRNP200O75643 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNRNP200O75643 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SNRNP200O75643 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
SNRNP200O75643 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
SNRNP200O75643 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SNRNP200O75643 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.45■■□□□ 1.66
SNRNP200O75643 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SNRNP200O75643 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.43■■□□□ 1.66
SNRNP200O75643 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
SNRNP200O75643 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SNRNP200O75643 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SNRNP200O75643 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SNRNP200O75643 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SNRNP200O75643 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms