Protein–RNA interactions for Protein: A1L188

NDUFAF8, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 8, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF8A1L188 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFAF8A1L188 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
NDUFAF8A1L188 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFAF8A1L188 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFAF8A1L188 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
NDUFAF8A1L188 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFAF8A1L188 PKM-203ENST00000389093 2279 ntTSL 5 BASIC11.46□□□□□ -0.57
NDUFAF8A1L188 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFAF8A1L188 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC11.46□□□□□ -0.57
NDUFAF8A1L188 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFAF8A1L188 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFAF8A1L188 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFAF8A1L188 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NDUFAF8A1L188 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFAF8A1L188 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFAF8A1L188 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFAF8A1L188 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFAF8A1L188 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFAF8A1L188 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC11.45□□□□□ -0.58
NDUFAF8A1L188 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFAF8A1L188 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC11.45□□□□□ -0.58
NDUFAF8A1L188 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
NDUFAF8A1L188 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC11.45□□□□□ -0.58
NDUFAF8A1L188 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFAF8A1L188 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFAF8A1L188 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFAF8A1L188 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
NDUFAF8A1L188 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFAF8A1L188 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
NDUFAF8A1L188 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFAF8A1L188 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC11.43□□□□□ -0.58
NDUFAF8A1L188 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC11.43□□□□□ -0.58
NDUFAF8A1L188 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFAF8A1L188 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFAF8A1L188 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC11.42□□□□□ -0.58
NDUFAF8A1L188 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFAF8A1L188 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
NDUFAF8A1L188 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NDUFAF8A1L188 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
NDUFAF8A1L188 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFAF8A1L188 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFAF8A1L188 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFAF8A1L188 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC11.41□□□□□ -0.58
NDUFAF8A1L188 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC11.41□□□□□ -0.58
NDUFAF8A1L188 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NDUFAF8A1L188 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
NDUFAF8A1L188 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFAF8A1L188 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
NDUFAF8A1L188 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
NDUFAF8A1L188 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFAF8A1L188 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFAF8A1L188 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFAF8A1L188 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFAF8A1L188 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
NDUFAF8A1L188 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NDUFAF8A1L188 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
NDUFAF8A1L188 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFAF8A1L188 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFAF8A1L188 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
NDUFAF8A1L188 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFAF8A1L188 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFAF8A1L188 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFAF8A1L188 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFAF8A1L188 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFAF8A1L188 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
NDUFAF8A1L188 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFAF8A1L188 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFAF8A1L188 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC11.38□□□□□ -0.59
NDUFAF8A1L188 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFAF8A1L188 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFAF8A1L188 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFAF8A1L188 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFAF8A1L188 SHF-207ENST00000560540 2062 ntTSL 5 BASIC11.37□□□□□ -0.59
NDUFAF8A1L188 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
NDUFAF8A1L188 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NDUFAF8A1L188 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NDUFAF8A1L188 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
NDUFAF8A1L188 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NDUFAF8A1L188 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
NDUFAF8A1L188 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
NDUFAF8A1L188 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFAF8A1L188 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFAF8A1L188 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFAF8A1L188 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
NDUFAF8A1L188 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC11.35□□□□□ -0.59
NDUFAF8A1L188 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFAF8A1L188 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFAF8A1L188 RARA-203ENST00000394086 2008 ntTSL 2 BASIC11.35□□□□□ -0.59
NDUFAF8A1L188 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
NDUFAF8A1L188 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFAF8A1L188 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFAF8A1L188 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFAF8A1L188 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFAF8A1L188 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
NDUFAF8A1L188 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFAF8A1L188 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC11.34□□□□□ -0.59
NDUFAF8A1L188 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFAF8A1L188 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFAF8A1L188 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFAF8A1L188 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms