Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
PPARGC1BQ86YN6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
PPARGC1BQ86YN6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
PPARGC1BQ86YN6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC33.22■■■□□ 2.91
PPARGC1BQ86YN6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
PPARGC1BQ86YN6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC33.22■■■□□ 2.91
PPARGC1BQ86YN6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
PPARGC1BQ86YN6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
PPARGC1BQ86YN6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC33.21■■■□□ 2.91
PPARGC1BQ86YN6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
PPARGC1BQ86YN6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
PPARGC1BQ86YN6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC33.21■■■□□ 2.91
PPARGC1BQ86YN6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC33.21■■■□□ 2.91
PPARGC1BQ86YN6 KRT18P61-201ENST00000585825 1298 ntBASIC33.21■■■□□ 2.91
PPARGC1BQ86YN6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC33.21■■■□□ 2.91
PPARGC1BQ86YN6 AF106564.1-201ENST00000607058 2553 ntBASIC33.21■■■□□ 2.91
PPARGC1BQ86YN6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC33.21■■■□□ 2.91
PPARGC1BQ86YN6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
PPARGC1BQ86YN6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
PPARGC1BQ86YN6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC33.2■■■□□ 2.91
PPARGC1BQ86YN6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
PPARGC1BQ86YN6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC33.2■■■□□ 2.91
PPARGC1BQ86YN6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
PPARGC1BQ86YN6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC33.2■■■□□ 2.91
PPARGC1BQ86YN6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
PPARGC1BQ86YN6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC33.2■■■□□ 2.91
PPARGC1BQ86YN6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
PPARGC1BQ86YN6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC33.2■■■□□ 2.91
PPARGC1BQ86YN6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
PPARGC1BQ86YN6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
PPARGC1BQ86YN6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC33.2■■■□□ 2.9
PPARGC1BQ86YN6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC33.2■■■□□ 2.9
PPARGC1BQ86YN6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC33.19■■■□□ 2.9
PPARGC1BQ86YN6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC33.19■■■□□ 2.9
PPARGC1BQ86YN6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC33.19■■■□□ 2.9
PPARGC1BQ86YN6 RARRES2P6-201ENST00000567333 442 ntBASIC33.19■■■□□ 2.9
PPARGC1BQ86YN6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC33.19■■■□□ 2.9
PPARGC1BQ86YN6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC33.19■■■□□ 2.9
PPARGC1BQ86YN6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC33.19■■■□□ 2.9
PPARGC1BQ86YN6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC33.19■■■□□ 2.9
PPARGC1BQ86YN6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
PPARGC1BQ86YN6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
PPARGC1BQ86YN6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
PPARGC1BQ86YN6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC33.18■■■□□ 2.9
PPARGC1BQ86YN6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC33.18■■■□□ 2.9
PPARGC1BQ86YN6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
PPARGC1BQ86YN6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
PPARGC1BQ86YN6 YBX1P1-201ENST00000445822 960 ntBASIC33.18■■■□□ 2.9
PPARGC1BQ86YN6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
PPARGC1BQ86YN6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
PPARGC1BQ86YN6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC33.18■■■□□ 2.9
PPARGC1BQ86YN6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC33.18■■■□□ 2.9
PPARGC1BQ86YN6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
PPARGC1BQ86YN6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
PPARGC1BQ86YN6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
PPARGC1BQ86YN6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC33.17■■■□□ 2.9
PPARGC1BQ86YN6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
PPARGC1BQ86YN6 DUX4L2-201ENST00000561772 1275 ntBASIC33.17■■■□□ 2.9
PPARGC1BQ86YN6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC33.17■■■□□ 2.9
PPARGC1BQ86YN6 DUX4L6-201ENST00000626483 1275 ntBASIC33.17■■■□□ 2.9
PPARGC1BQ86YN6 DUX4L1-201ENST00000627662 1275 ntBASIC33.17■■■□□ 2.9
PPARGC1BQ86YN6 DUX4L8-201ENST00000629013 1275 ntBASIC33.17■■■□□ 2.9
PPARGC1BQ86YN6 DUX4L3-201ENST00000630187 1275 ntBASIC33.17■■■□□ 2.9
PPARGC1BQ86YN6 DUX4L7-201ENST00000630678 1275 ntBASIC33.17■■■□□ 2.9
PPARGC1BQ86YN6 DUX4L5-201ENST00000630834 1275 ntBASIC33.17■■■□□ 2.9
PPARGC1BQ86YN6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
PPARGC1BQ86YN6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
PPARGC1BQ86YN6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC33.17■■■□□ 2.9
PPARGC1BQ86YN6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC33.17■■■□□ 2.9
PPARGC1BQ86YN6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
PPARGC1BQ86YN6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
PPARGC1BQ86YN6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
PPARGC1BQ86YN6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC33.16■■■□□ 2.9
PPARGC1BQ86YN6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC33.16■■■□□ 2.9
PPARGC1BQ86YN6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC33.16■■■□□ 2.9
PPARGC1BQ86YN6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
PPARGC1BQ86YN6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
PPARGC1BQ86YN6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
PPARGC1BQ86YN6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
PPARGC1BQ86YN6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
PPARGC1BQ86YN6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC33.16■■■□□ 2.9
PPARGC1BQ86YN6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
PPARGC1BQ86YN6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
PPARGC1BQ86YN6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
PPARGC1BQ86YN6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC33.15■■■□□ 2.9
PPARGC1BQ86YN6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
PPARGC1BQ86YN6 AC009237.3-201ENST00000393279 1427 ntBASIC33.15■■■□□ 2.9
PPARGC1BQ86YN6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
PPARGC1BQ86YN6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC33.15■■■□□ 2.9
PPARGC1BQ86YN6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC33.15■■■□□ 2.9
PPARGC1BQ86YN6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC33.14■■■□□ 2.9
PPARGC1BQ86YN6 AC092667.1-201ENST00000434301 2586 ntBASIC33.14■■■□□ 2.9
PPARGC1BQ86YN6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
PPARGC1BQ86YN6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
PPARGC1BQ86YN6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC33.14■■■□□ 2.9
PPARGC1BQ86YN6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
PPARGC1BQ86YN6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
PPARGC1BQ86YN6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
PPARGC1BQ86YN6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC33.13■■■□□ 2.89
PPARGC1BQ86YN6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms