RNA–Protein interactions for RNA: ENST00000372903.6

UBR2-203, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

TSL 1 (best) BASIC

Gene UBR2, Length 2,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-203ENST00000372903 NISCHQ9Y2I1 1504 aa41.58■■■■■ 4.25
UBR2-203ENST00000372903 SHROOM4Q9ULL8 1493 aa35.83■■■■□ 3.33
UBR2-203ENST00000372903 SUPT5HO00267 1087 aaKnown RBP35.25■■■■□ 3.23
UBR2-203ENST00000372903 ZCCHC6Q5VYS8 1495 aaKnown RBP35.22■■■■□ 3.23
UBR2-203ENST00000372903 CCDC180Q9P1Z9 1646 aa35.13■■■■□ 3.21
UBR2-203ENST00000372903 DCAF8L2P0C7V8 631 aa34.52■■■■□ 3.12
UBR2-203ENST00000372903 MYO15BQ96JP2 1530 aa34.39■■■■□ 3.1
UBR2-203ENST00000372903 CHIC1Q5VXU3 224 aa34.38■■■■□ 3.09
UBR2-203ENST00000372903 DCAF1Q9Y4B6 1507 aa34.01■■■■□ 3.04
UBR2-203ENST00000372903 HRCP23327 699 aa33.81■■■■□ 3
UBR2-203ENST00000372903 PCGF6Q9BYE7 350 aa33.65■■■□□ 2.98
UBR2-203ENST00000372903 LOC105371045A0A1W2PR82 267 aa33.45■■■□□ 2.95
UBR2-203ENST00000372903 ABCC9O60706 1549 aa33.29■■■□□ 2.92
UBR2-203ENST00000372903 PPARGC1BQ86YN6 1023 aaKnown RBP33.18■■■□□ 2.9
UBR2-203ENST00000372903 SCRIBQ14160 1630 aa33.11■■■□□ 2.89
UBR2-203ENST00000372903 RSF1Q96T23 1441 aaPredicted RBP33.07■■■□□ 2.88
UBR2-203ENST00000372903 TRIM26Q12899 539 aaPredicted RBP32.86■■■□□ 2.85
UBR2-203ENST00000372903 RB1CC1Q8TDY2 1594 aa32.79■■■□□ 2.84
UBR2-203ENST00000372903 TRIM41Q8WV44 630 aa32.74■■■□□ 2.83
UBR2-203ENST00000372903 NACADO15069 1562 aa32.61■■■□□ 2.81
UBR2-203ENST00000372903 FAM9AQ8IZU1 332 aaPredicted RBP32.59■■■□□ 2.81
UBR2-203ENST00000372903 CECR2Q9BXF3 1484 aa32.51■■■□□ 2.79
UBR2-203ENST00000372903 MROH2BQ7Z745 1585 aa32.4■■■□□ 2.78
UBR2-203ENST00000372903 EHMT2Q96KQ7 1210 aa32.37■■■□□ 2.77
UBR2-203ENST00000372903 WIZO95785 1651 aa32.24■■■□□ 2.75
UBR2-203ENST00000372903 ZEB1P37275 1124 aaPredicted RBP32.17■■■□□ 2.74
UBR2-203ENST00000372903 BAZ1AQ9NRL2 1556 aaPredicted RBP31.99■■■□□ 2.71
UBR2-203ENST00000372903 EIF4G1Q04637 1599 aaKnown RBP31.9■■■□□ 2.7
UBR2-203ENST00000372903 UNC13AQ9UPW8 1703 aa31.77■■■□□ 2.68
UBR2-203ENST00000372903 ABCC8Q09428 1581 aa31.67■■■□□ 2.66
UBR2-203ENST00000372903 TOP2AP11388 1531 aaKnown RBP31.66■■■□□ 2.66
UBR2-203ENST00000372903 CCDC88BA6NC98 1476 aa31.61■■■□□ 2.65
UBR2-203ENST00000372903 SMARCA4P51532 1647 aa31.6■■■□□ 2.65
UBR2-203ENST00000372903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.58■■■□□ 2.65
UBR2-203ENST00000372903 SMARCA2P51531 1590 aa31.54■■■□□ 2.64
UBR2-203ENST00000372903 CCER1Q8TC90 406 aaPredicted RBP31.46■■■□□ 2.63
UBR2-203ENST00000372903 SOGA1O94964 1423 aa31.43■■■□□ 2.62
UBR2-203ENST00000372903 TTBK1Q5TCY1 1321 aaPredicted RBP31.4■■■□□ 2.62
UBR2-203ENST00000372903 SCAF1Q9H7N4 1312 aaKnown RBP31.39■■■□□ 2.62
UBR2-203ENST00000372903 CEP162Q5TB80 1403 aa31.39■■■□□ 2.62
UBR2-203ENST00000372903 WRNQ14191 1432 aaPredicted RBP eCLIP31.38■■■□□ 2.61
UBR2-203ENST00000372903 BICRAQ9NZM4 1560 aa31.37■■■□□ 2.61
UBR2-203ENST00000372903 PABPN1Q86U42 306 aaKnown RBP eCLIP31.35■■■□□ 2.61
UBR2-203ENST00000372903 RUSC2Q8N2Y8 1516 aa31.29■■■□□ 2.6
UBR2-203ENST00000372903 TNIKQ9UKE5 1360 aa31.27■■■□□ 2.6
UBR2-203ENST00000372903 CSRNP3Q8WYN3 585 aa31.22■■■□□ 2.59
UBR2-203ENST00000372903 UBTFP17480 764 aaKnown RBP31.16■■■□□ 2.58
UBR2-203ENST00000372903 EEA1Q15075 1411 aa31.16■■■□□ 2.58
UBR2-203ENST00000372903 GOLGA3Q08378 1498 aa31.03■■■□□ 2.56
UBR2-203ENST00000372903 DIEXFQ68CQ4 756 aaKnown RBP31■■■□□ 2.55
UBR2-203ENST00000372903 ACIN1Q9UKV3 1341 aaKnown RBP30.93■■■□□ 2.54
UBR2-203ENST00000372903 NEUROD1Q13562 356 aa30.93■■■□□ 2.54
UBR2-203ENST00000372903 PEG3Q9GZU2 1588 aa30.93■■■□□ 2.54
UBR2-203ENST00000372903 SYNJ1O43426 1573 aa30.9■■■□□ 2.54
UBR2-203ENST00000372903 PELP1Q8IZL8 1130 aaKnown RBP30.86■■■□□ 2.53
UBR2-203ENST00000372903 CEP164Q9UPV0 1460 aa30.81■■■□□ 2.52
UBR2-203ENST00000372903 KIF21BO75037 1637 aa30.76■■■□□ 2.52
UBR2-203ENST00000372903 ATAD2BQ9ULI0 1458 aa30.73■■■□□ 2.51
UBR2-203ENST00000372903 CLIP1P30622 1438 aa30.73■■■□□ 2.51
UBR2-203ENST00000372903 HNRNPUL2Q1KMD3 747 aaKnown RBP30.69■■■□□ 2.5
UBR2-203ENST00000372903 ZNF316A6NFI3 1004 aaPredicted RBP30.67■■■□□ 2.5
UBR2-203ENST00000372903 BAZ1BQ9UIG0 1483 aaKnown RBP30.65■■■□□ 2.5
UBR2-203ENST00000372903 CENPBP07199 599 aaPredicted RBP30.64■■■□□ 2.5
UBR2-203ENST00000372903 RAPGEF2Q9Y4G8 1499 aa30.63■■■□□ 2.49
UBR2-203ENST00000372903 GTF3C3Q9Y5Q9 886 aa30.62■■■□□ 2.49
UBR2-203ENST00000372903 VPS8Q8N3P4 1428 aa30.61■■■□□ 2.49
UBR2-203ENST00000372903 RANGAP1P46060 587 aaPredicted RBP30.56■■■□□ 2.48
UBR2-203ENST00000372903 APLP2Q06481 763 aa30.46■■■□□ 2.47
UBR2-203ENST00000372903 TOP2BQ02880 1626 aa30.43■■■□□ 2.46
UBR2-203ENST00000372903 YTHDC1Q96MU7 727 aaKnown RBP30.36■■■□□ 2.45
UBR2-203ENST00000372903 MIER1Q8N108 512 aa30.34■■■□□ 2.45
UBR2-203ENST00000372903 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
UBR2-203ENST00000372903 PRXQ9BXM0 1461 aa30.24■■■□□ 2.43
UBR2-203ENST00000372903 ARAP1Q96P48 1450 aa30.21■■■□□ 2.43
UBR2-203ENST00000372903 ERICH3Q5RHP9 1530 aa30.21■■■□□ 2.43
UBR2-203ENST00000372903 KANK4Q5T7N3 995 aaPredicted RBP30.16■■■□□ 2.42
UBR2-203ENST00000372903 NCAPD3P42695 1498 aa30.15■■■□□ 2.42
UBR2-203ENST00000372903 CUX1P39880 1505 aa30.13■■■□□ 2.41
UBR2-203ENST00000372903 HMGXB3Q12766 1538 aa30.11■■■□□ 2.41
UBR2-203ENST00000372903 DHX57Q6P158 1386 aaKnown RBP30.09■■■□□ 2.41
UBR2-203ENST00000372903 KIF27Q86VH2 1401 aa30.01■■■□□ 2.4
UBR2-203ENST00000372903 CLSPNQ9HAW4 1339 aa30■■■□□ 2.39
UBR2-203ENST00000372903 RRBP1Q9P2E9 1410 aaKnown RBP29.94■■■□□ 2.38
UBR2-203ENST00000372903 CFTRP13569 1480 aa29.91■■■□□ 2.38
UBR2-203ENST00000372903 ARHGAP35Q9NRY4 1499 aa29.9■■■□□ 2.38
UBR2-203ENST00000372903 CCNB3Q8WWL7 1395 aa29.82■■■□□ 2.36
UBR2-203ENST00000372903 CC2D2AQ9P2K1 1620 aa29.81■■■□□ 2.36
UBR2-203ENST00000372903 CUX2O14529 1486 aa29.78■■■□□ 2.36
UBR2-203ENST00000372903 ITGAEP38570 1179 aa29.78■■■□□ 2.36
UBR2-203ENST00000372903 IGF1RP08069 1367 aa29.71■■■□□ 2.35
UBR2-203ENST00000372903 RAB3GAP2Q9H2M9 1393 aa29.61■■■□□ 2.33
UBR2-203ENST00000372903 TIAM1Q13009 1591 aa29.59■■■□□ 2.33
UBR2-203ENST00000372903 PRDM2Q13029 1718 aa29.59■■■□□ 2.33
UBR2-203ENST00000372903 CARMIL1Q5VZK9 1371 aa29.57■■■□□ 2.32
UBR2-203ENST00000372903 MAPKBP1O60336 1514 aa29.55■■■□□ 2.32
UBR2-203ENST00000372903 FGD5Q6ZNL6 1462 aa29.54■■■□□ 2.32
UBR2-203ENST00000372903 CADPSQ9ULU8 1353 aa29.52■■■□□ 2.32
UBR2-203ENST00000372903 MAP3K1Q13233 1512 aa29.51■■■□□ 2.31
UBR2-203ENST00000372903 LRRC9Q6ZRR7 1453 aa29.5■■■□□ 2.31
UBR2-203ENST00000372903 PHLDB1Q86UU1 1377 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms