RNA–Protein interactions for RNA: ENST00000376670.7

GATA1-202, Transcript of GATA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATA1, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATA1-202ENST00000376670 NISCHQ9Y2I1 1504 aa51.95■■■■■ 5.91
GATA1-202ENST00000376670 CCDC180Q9P1Z9 1646 aa46.17■■■■■ 4.98
GATA1-202ENST00000376670 ABCC9O60706 1549 aa45.49■■■■■ 4.87
GATA1-202ENST00000376670 DCAF8L2P0C7V8 631 aa43.66■■■■■ 4.58
GATA1-202ENST00000376670 RB1CC1Q8TDY2 1594 aa43.55■■■■■ 4.56
GATA1-202ENST00000376670 NACADO15069 1562 aa43.43■■■■■ 4.54
GATA1-202ENST00000376670 ZCCHC6Q5VYS8 1495 aaKnown RBP43.24■■■■■ 4.51
GATA1-202ENST00000376670 MYO15BQ96JP2 1530 aa43.02■■■■■ 4.48
GATA1-202ENST00000376670 DCAF1Q9Y4B6 1507 aa42.83■■■■■ 4.45
GATA1-202ENST00000376670 UNC13AQ9UPW8 1703 aa42.71■■■■■ 4.43
GATA1-202ENST00000376670 PABPN1Q86U42 306 aaKnown RBP eCLIP42.55■■■■■ 4.4
GATA1-202ENST00000376670 BICRAQ9NZM4 1560 aa42.32■■■■■ 4.37
GATA1-202ENST00000376670 SCRIBQ14160 1630 aa42.31■■■■■ 4.36
GATA1-202ENST00000376670 DNAJC5BQ9UF47 199 aa41.92■■■■■ 4.3
GATA1-202ENST00000376670 SHROOM4Q9ULL8 1493 aa41.6■■■■■ 4.25
GATA1-202ENST00000376670 EIF4G1Q04637 1599 aaKnown RBP41.19■■■■■ 4.18
GATA1-202ENST00000376670 CC2D2AQ9P2K1 1620 aa41.09■■■■■ 4.17
GATA1-202ENST00000376670 CECR2Q9BXF3 1484 aa40.8■■■■■ 4.12
GATA1-202ENST00000376670 SMARCA4P51532 1647 aa40.37■■■■■ 4.05
GATA1-202ENST00000376670 BAZ1AQ9NRL2 1556 aaPredicted RBP40.24■■■■■ 4.03
GATA1-202ENST00000376670 ATAD2BQ9ULI0 1458 aa40.15■■■■■ 4.02
GATA1-202ENST00000376670 MROH2BQ7Z745 1585 aa40.12■■■■■ 4.01
GATA1-202ENST00000376670 NCAPD3P42695 1498 aa40.08■■■■■ 4.01
GATA1-202ENST00000376670 SMARCA2P51531 1590 aa40.04■■■■■ 4
GATA1-202ENST00000376670 HMGXB3Q12766 1538 aa39.87■■■■□ 3.97
GATA1-202ENST00000376670 PEG3Q9GZU2 1588 aa39.87■■■■□ 3.97
GATA1-202ENST00000376670 BAZ1BQ9UIG0 1483 aaKnown RBP39.83■■■■□ 3.97
GATA1-202ENST00000376670 WIZO95785 1651 aa39.72■■■■□ 3.95
GATA1-202ENST00000376670 RSF1Q96T23 1441 aaPredicted RBP39.57■■■■□ 3.92
GATA1-202ENST00000376670 NESP48681 1621 aa39.36■■■■□ 3.89
GATA1-202ENST00000376670 TOP2AP11388 1531 aaKnown RBP39.17■■■■□ 3.86
GATA1-202ENST00000376670 ERCC6Q03468 1493 aa39.15■■■■□ 3.86
GATA1-202ENST00000376670 LAMC3Q9Y6N6 1575 aa39.05■■■■□ 3.84
GATA1-202ENST00000376670 CADPSQ9ULU8 1353 aa38.95■■■■□ 3.83
GATA1-202ENST00000376670 KIF21AQ7Z4S6 1674 aa38.86■■■■□ 3.81
GATA1-202ENST00000376670 PDS5BQ9NTI5 1447 aa38.79■■■■□ 3.8
GATA1-202ENST00000376670 CCDC88BA6NC98 1476 aa38.76■■■■□ 3.8
GATA1-202ENST00000376670 THOC2Q8NI27 1593 aaKnown RBP38.69■■■■□ 3.78
GATA1-202ENST00000376670 CFTRP13569 1480 aa38.68■■■■□ 3.78
GATA1-202ENST00000376670 CUX2O14529 1486 aa38.66■■■■□ 3.78
GATA1-202ENST00000376670 SUPT5HO00267 1087 aaKnown RBP38.64■■■■□ 3.78
GATA1-202ENST00000376670 FANCD2Q9BXW9 1451 aa38.55■■■■□ 3.76
GATA1-202ENST00000376670 CEP164Q9UPV0 1460 aa38.5■■■■□ 3.75
GATA1-202ENST00000376670 MRC2Q9UBG0 1479 aa38.45■■■■□ 3.75
GATA1-202ENST00000376670 PRDM2Q13029 1718 aa38.42■■■■□ 3.74
GATA1-202ENST00000376670 WDR62O43379 1518 aa38.32■■■■□ 3.72
GATA1-202ENST00000376670 URB2Q14146 1524 aaKnown RBP38.21■■■■□ 3.71
GATA1-202ENST00000376670 TOPBP1Q92547 1522 aa37.93■■■■□ 3.66
GATA1-202ENST00000376670 DNMBPQ6XZF7 1577 aa37.84■■■■□ 3.65
GATA1-202ENST00000376670 ABCC8Q09428 1581 aa37.77■■■■□ 3.64
GATA1-202ENST00000376670 DNAJC5Q9H3Z4 198 aa37.7■■■■□ 3.63
GATA1-202ENST00000376670 IFT140Q96RY7 1462 aa37.64■■■■□ 3.62
GATA1-202ENST00000376670 CUX1P39880 1505 aa37.63■■■■□ 3.61
GATA1-202ENST00000376670 ZNF608Q9ULD9 1512 aaPredicted RBP37.63■■■■□ 3.61
GATA1-202ENST00000376670 POLA1P09884 1462 aaPredicted RBP37.6■■■■□ 3.61
GATA1-202ENST00000376670 TARBP1Q13395 1621 aaKnown RBP37.52■■■■□ 3.6
GATA1-202ENST00000376670 FGD5Q6ZNL6 1462 aa37.52■■■■□ 3.6
GATA1-202ENST00000376670 RAD54L2Q9Y4B4 1467 aa37.52■■■■□ 3.6
GATA1-202ENST00000376670 SOGA1O94964 1423 aa37.43■■■■□ 3.58
GATA1-202ENST00000376670 EIF4G3O43432 1585 aaKnown RBP37.43■■■■□ 3.58
GATA1-202ENST00000376670 AQRO60306 1485 aaKnown RBP eCLIP37.4■■■■□ 3.582e-9■■■■■ 43.3
GATA1-202ENST00000376670 TDRD9Q8NDG6 1382 aaKnown RBP37.31■■■■□ 3.56
GATA1-202ENST00000376670 WRNQ14191 1432 aaPredicted RBP eCLIP37.3■■■■□ 3.56
GATA1-202ENST00000376670 SYNJ1O43426 1573 aa37.29■■■■□ 3.56
GATA1-202ENST00000376670 TOP2BQ02880 1626 aa37.21■■■■□ 3.55
GATA1-202ENST00000376670 BIVM-ERCC5R4GMW8 1640 aa37.21■■■■□ 3.55
GATA1-202ENST00000376670 WDR97A6NE52 1622 aa37.18■■■■□ 3.54
GATA1-202ENST00000376670 OSCARQ8IYS5 282 aa37.11■■■■□ 3.53
GATA1-202ENST00000376670 ABCA10Q8WWZ4 1543 aa37.07■■■■□ 3.52
GATA1-202ENST00000376670 CHD1O14646 1710 aa37.03■■■■□ 3.52
GATA1-202ENST00000376670 SNAPC4Q5SXM2 1469 aa37.02■■■■□ 3.52
GATA1-202ENST00000376670 FBLN2P98095 1184 aa37.01■■■■□ 3.52
GATA1-202ENST00000376670 GAPVD1Q14C86 1478 aa36.99■■■■□ 3.51
GATA1-202ENST00000376670 PBRM1Q86U86 1689 aa36.97■■■■□ 3.51
GATA1-202ENST00000376670 GRIN2BQ13224 1484 aa36.97■■■■□ 3.51
GATA1-202ENST00000376670 ABCA5Q8WWZ7 1642 aa36.96■■■■□ 3.51
GATA1-202ENST00000376670 MAGI1Q96QZ7 1491 aaPredicted RBP36.85■■■■□ 3.49
GATA1-202ENST00000376670 CHMP7Q8WUX9 453 aaPredicted RBP36.8■■■■□ 3.48
GATA1-202ENST00000376670 SYNJ2O15056 1496 aa36.74■■■■□ 3.47
GATA1-202ENST00000376670 ADAMTS12P58397 1594 aa36.64■■■■□ 3.46
GATA1-202ENST00000376670 RIMBP3CA6NJZ7 1639 aa36.6■■■■□ 3.45
GATA1-202ENST00000376670 RIMBP3BA6NNM3 1639 aa36.6■■■■□ 3.45
GATA1-202ENST00000376670 RIMBP3Q9UFD9 1639 aa36.6■■■■□ 3.45
GATA1-202ENST00000376670 ERICH3Q5RHP9 1530 aa36.6■■■■□ 3.45
GATA1-202ENST00000376670 TRIM41Q8WV44 630 aa36.59■■■■□ 3.45
GATA1-202ENST00000376670 ARHGEF11O15085 1522 aa36.55■■■■□ 3.44
GATA1-202ENST00000376670 CLASP1Q7Z460 1538 aa36.53■■■■□ 3.44
GATA1-202ENST00000376670 GRIN2AQ12879 1464 aa36.52■■■■□ 3.44
GATA1-202ENST00000376670 FHAD1B1AJZ9 1412 aa36.52■■■■□ 3.44
GATA1-202ENST00000376670 KIF27Q86VH2 1401 aa36.5■■■■□ 3.43
GATA1-202ENST00000376670 CEP170Q5SW79 1584 aa36.4■■■■□ 3.42
GATA1-202ENST00000376670 IGF1RP08069 1367 aa36.4■■■■□ 3.42
GATA1-202ENST00000376670 NUP160Q12769 1436 aa36.34■■■■□ 3.41
GATA1-202ENST00000376670 RUSC2Q8N2Y8 1516 aa36.31■■■■□ 3.4
GATA1-202ENST00000376670 CYB5RLQ6IPT4 315 aa36.29■■■■□ 3.4
GATA1-202ENST00000376670 ARAP1Q96P48 1450 aa36.28■■■■□ 3.4
GATA1-202ENST00000376670 CUL7Q14999 1698 aa36.26■■■■□ 3.4
GATA1-202ENST00000376670 CARMIL1Q5VZK9 1371 aa36.18■■■■□ 3.38
GATA1-202ENST00000376670 ERCC6L2Q5T890 1561 aa36.16■■■■□ 3.38
GATA1-202ENST00000376670 SHROOM2Q13796 1616 aa36.08■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms