Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.96■□□□□ 0.3
FAM78BQ5VT40 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
FAM78BQ5VT40 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
FAM78BQ5VT40 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.95■□□□□ 0.3
FAM78BQ5VT40 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
FAM78BQ5VT40 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.95■□□□□ 0.3
FAM78BQ5VT40 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM78BQ5VT40 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM78BQ5VT40 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM78BQ5VT40 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
FAM78BQ5VT40 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.95■□□□□ 0.3
FAM78BQ5VT40 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM78BQ5VT40 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM78BQ5VT40 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
FAM78BQ5VT40 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
FAM78BQ5VT40 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FAM78BQ5VT40 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.94■□□□□ 0.3
FAM78BQ5VT40 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FAM78BQ5VT40 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FAM78BQ5VT40 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 DUX4L4-201ENST00000566884 1269 ntBASIC16.91■□□□□ 0.3
FAM78BQ5VT40 AC137630.3-201ENST00000607245 391 ntBASIC16.91■□□□□ 0.3
FAM78BQ5VT40 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 AC005703.6-201ENST00000623265 1329 ntBASIC16.91■□□□□ 0.3
FAM78BQ5VT40 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
FAM78BQ5VT40 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.9■□□□□ 0.3
FAM78BQ5VT40 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
FAM78BQ5VT40 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
FAM78BQ5VT40 Z98882.1-201ENST00000622160 2253 ntBASIC16.9■□□□□ 0.3
FAM78BQ5VT40 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms