RNA–Protein interactions for RNA: ENST00000368001.1

USP21-202, Transcript of ubiquitin specific peptidase 21, humanhuman

TSL 1 (best) BASIC

Gene USP21, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP21-202ENST00000368001 NISCHQ9Y2I1 1504 aa49.93■■■■■ 5.58
USP21-202ENST00000368001 CCDC180Q9P1Z9 1646 aa43.57■■■■■ 4.57
USP21-202ENST00000368001 ZCCHC6Q5VYS8 1495 aaKnown RBP41.92■■■■■ 4.3
USP21-202ENST00000368001 ABCC9O60706 1549 aa41.53■■■■■ 4.24
USP21-202ENST00000368001 DCAF8L2P0C7V8 631 aa41.35■■■■■ 4.21
USP21-202ENST00000368001 DCAF1Q9Y4B6 1507 aa41.2■■■■■ 4.19
USP21-202ENST00000368001 MYO15BQ96JP2 1530 aa40.77■■■■■ 4.12
USP21-202ENST00000368001 SHROOM4Q9ULL8 1493 aa40.72■■■■■ 4.11
USP21-202ENST00000368001 NACADO15069 1562 aa40.62■■■■■ 4.09
USP21-202ENST00000368001 RB1CC1Q8TDY2 1594 aa40.34■■■■■ 4.05
USP21-202ENST00000368001 SCRIBQ14160 1630 aa40.18■■■■■ 4.02
USP21-202ENST00000368001 UNC13AQ9UPW8 1703 aa39.65■■■■□ 3.94
USP21-202ENST00000368001 BICRAQ9NZM4 1560 aa39.25■■■■□ 3.87
USP21-202ENST00000368001 PABPN1Q86U42 306 aaKnown RBP eCLIP39.15■■■■□ 3.86
USP21-202ENST00000368001 SUPT5HO00267 1087 aaKnown RBP39.01■■■■□ 3.84
USP21-202ENST00000368001 CECR2Q9BXF3 1484 aa38.92■■■■□ 3.82
USP21-202ENST00000368001 RSF1Q96T23 1441 aaPredicted RBP38.69■■■■□ 3.78
USP21-202ENST00000368001 MROH2BQ7Z745 1585 aa38.64■■■■□ 3.78
USP21-202ENST00000368001 BAZ1AQ9NRL2 1556 aaPredicted RBP38.54■■■■□ 3.76
USP21-202ENST00000368001 SMARCA4P51532 1647 aa38.44■■■■□ 3.74
USP21-202ENST00000368001 WIZO95785 1651 aa38.32■■■■□ 3.73
USP21-202ENST00000368001 EIF4G1Q04637 1599 aaKnown RBP38.04■■■■□ 3.68
USP21-202ENST00000368001 PEG3Q9GZU2 1588 aa37.94■■■■□ 3.66
USP21-202ENST00000368001 ATAD2BQ9ULI0 1458 aa37.87■■■■□ 3.65
USP21-202ENST00000368001 TOP2AP11388 1531 aaKnown RBP37.84■■■■□ 3.65
USP21-202ENST00000368001 SMARCA2P51531 1590 aa37.76■■■■□ 3.64
USP21-202ENST00000368001 BAZ1BQ9UIG0 1483 aaKnown RBP37.62■■■■□ 3.61
USP21-202ENST00000368001 CC2D2AQ9P2K1 1620 aa37.55■■■■□ 3.6
USP21-202ENST00000368001 NCAPD3P42695 1498 aa37.53■■■■□ 3.6
USP21-202ENST00000368001 CCDC88BA6NC98 1476 aa37.49■■■■□ 3.59
USP21-202ENST00000368001 HMGXB3Q12766 1538 aa37.45■■■■□ 3.59
USP21-202ENST00000368001 CHIC1Q5VXU3 224 aa37.21■■■■□ 3.55
USP21-202ENST00000368001 DNAJC5BQ9UF47 199 aa36.89■■■■□ 3.5
USP21-202ENST00000368001 ABCC8Q09428 1581 aa36.7■■■■□ 3.47
USP21-202ENST00000368001 CFTRP13569 1480 aa36.66■■■■□ 3.46
USP21-202ENST00000368001 TRIM41Q8WV44 630 aa36.62■■■■□ 3.45
USP21-202ENST00000368001 CADPSQ9ULU8 1353 aa36.56■■■■□ 3.44
USP21-202ENST00000368001 NESP48681 1621 aa36.44■■■■□ 3.42
USP21-202ENST00000368001 PRDM2Q13029 1718 aa36.43■■■■□ 3.42
USP21-202ENST00000368001 WRNQ14191 1432 aaPredicted RBP eCLIP36.39■■■■□ 3.42
USP21-202ENST00000368001 SYNJ1O43426 1573 aa36.33■■■■□ 3.41
USP21-202ENST00000368001 LAMC3Q9Y6N6 1575 aa36.27■■■■□ 3.4
USP21-202ENST00000368001 FANCD2Q9BXW9 1451 aa36.19■■■■□ 3.38
USP21-202ENST00000368001 CUX1P39880 1505 aa36.13■■■■□ 3.37
USP21-202ENST00000368001 TOP2BQ02880 1626 aa36.12■■■■□ 3.37
USP21-202ENST00000368001 BIVM-ERCC5R4GMW8 1640 aa36.08■■■■□ 3.37
USP21-202ENST00000368001 FAM9AQ8IZU1 332 aaPredicted RBP36.05■■■■□ 3.36
USP21-202ENST00000368001 PDS5BQ9NTI5 1447 aa35.98■■■■□ 3.35
USP21-202ENST00000368001 SOGA1O94964 1423 aa35.96■■■■□ 3.35
USP21-202ENST00000368001 KIF21AQ7Z4S6 1674 aa35.95■■■■□ 3.35
USP21-202ENST00000368001 CEP164Q9UPV0 1460 aa35.95■■■■□ 3.35
USP21-202ENST00000368001 RUSC2Q8N2Y8 1516 aa35.87■■■■□ 3.33
USP21-202ENST00000368001 LOC105371045A0A1W2PR82 267 aa35.85■■■■□ 3.33
USP21-202ENST00000368001 DNMBPQ6XZF7 1577 aa35.8■■■■□ 3.32
USP21-202ENST00000368001 URB2Q14146 1524 aaKnown RBP35.79■■■■□ 3.32
USP21-202ENST00000368001 TOPBP1Q92547 1522 aa35.78■■■■□ 3.32
USP21-202ENST00000368001 FGD5Q6ZNL6 1462 aa35.75■■■■□ 3.31
USP21-202ENST00000368001 EEA1Q15075 1411 aa35.64■■■■□ 3.3
USP21-202ENST00000368001 EHMT2Q96KQ7 1210 aa35.63■■■■□ 3.29
USP21-202ENST00000368001 POLA1P09884 1462 aaPredicted RBP35.61■■■■□ 3.29
USP21-202ENST00000368001 MRC2Q9UBG0 1479 aa35.57■■■■□ 3.28
USP21-202ENST00000368001 CSRNP3Q8WYN3 585 aa35.55■■■■□ 3.28
USP21-202ENST00000368001 ERCC6Q03468 1493 aa35.55■■■■□ 3.28
USP21-202ENST00000368001 RAD54L2Q9Y4B4 1467 aa35.53■■■■□ 3.28
USP21-202ENST00000368001 CUX2O14529 1486 aa35.46■■■■□ 3.27
USP21-202ENST00000368001 KIF27Q86VH2 1401 aa35.44■■■■□ 3.26
USP21-202ENST00000368001 WDR62O43379 1518 aa35.41■■■■□ 3.26
USP21-202ENST00000368001 THOC2Q8NI27 1593 aaKnown RBP35.4■■■■□ 3.26
USP21-202ENST00000368001 ABCA10Q8WWZ4 1543 aa35.38■■■■□ 3.25
USP21-202ENST00000368001 WDR97A6NE52 1622 aa35.33■■■■□ 3.25
USP21-202ENST00000368001 TARBP1Q13395 1621 aaKnown RBP35.29■■■■□ 3.24
USP21-202ENST00000368001 KIF21BO75037 1637 aa35.28■■■■□ 3.24
USP21-202ENST00000368001 GOLGA3Q08378 1498 aa35.23■■■■□ 3.23
USP21-202ENST00000368001 RAPGEF2Q9Y4G8 1499 aa35.21■■■■□ 3.23
USP21-202ENST00000368001 IGF1RP08069 1367 aa35.21■■■■□ 3.23
USP21-202ENST00000368001 PRXQ9BXM0 1461 aa35.2■■■■□ 3.23
USP21-202ENST00000368001 TDRD9Q8NDG6 1382 aaKnown RBP35.19■■■■□ 3.22
USP21-202ENST00000368001 ABCA5Q8WWZ7 1642 aa35.15■■■■□ 3.22
USP21-202ENST00000368001 UBTFP17480 764 aaKnown RBP35.1■■■■□ 3.21
USP21-202ENST00000368001 IFT140Q96RY7 1462 aa35.08■■■■□ 3.21
USP21-202ENST00000368001 TNIKQ9UKE5 1360 aa35.06■■■■□ 3.2
USP21-202ENST00000368001 ERICH3Q5RHP9 1530 aa35.06■■■■□ 3.2
USP21-202ENST00000368001 GAPVD1Q14C86 1478 aa35.06■■■■□ 3.2
USP21-202ENST00000368001 ZNF608Q9ULD9 1512 aaPredicted RBP35.03■■■■□ 3.2
USP21-202ENST00000368001 AQRO60306 1485 aaKnown RBP eCLIP35.01■■■■□ 3.192e-6■■■■□ 26.1
USP21-202ENST00000368001 CARMIL1Q5VZK9 1371 aa35.01■■■■□ 3.19
USP21-202ENST00000368001 CEP162Q5TB80 1403 aa34.93■■■■□ 3.18
USP21-202ENST00000368001 PBRM1Q86U86 1689 aa34.9■■■■□ 3.18
USP21-202ENST00000368001 CUL7Q14999 1698 aa34.9■■■■□ 3.18
USP21-202ENST00000368001 EIF4G3O43432 1585 aaKnown RBP34.86■■■■□ 3.17
USP21-202ENST00000368001 GRIN2BQ13224 1484 aa34.79■■■■□ 3.16
USP21-202ENST00000368001 RANGAP1P46060 587 aaPredicted RBP34.72■■■■□ 3.15
USP21-202ENST00000368001 ADAMTS12P58397 1594 aa34.7■■■■□ 3.15
USP21-202ENST00000368001 CLIP1P30622 1438 aa34.69■■■■□ 3.14
USP21-202ENST00000368001 SNAPC4Q5SXM2 1469 aa34.65■■■■□ 3.14
USP21-202ENST00000368001 FHAD1B1AJZ9 1412 aa34.65■■■■□ 3.14
USP21-202ENST00000368001 CTTNBP2Q8WZ74 1663 aa34.52■■■■□ 3.12
USP21-202ENST00000368001 MAGI1Q96QZ7 1491 aaPredicted RBP34.51■■■■□ 3.11
USP21-202ENST00000368001 ARHGAP35Q9NRY4 1499 aa34.45■■■■□ 3.11
USP21-202ENST00000368001 ARAP1Q96P48 1450 aa34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms