RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 NISCHQ9Y2I1 1504 aa44.84■■■■■ 4.77
LSM14A-202ENST00000540746 CCDC180Q9P1Z9 1646 aa38.41■■■■□ 3.74
LSM14A-202ENST00000540746 ZCCHC6Q5VYS8 1495 aaKnown RBP37.86■■■■□ 3.65
LSM14A-202ENST00000540746 SHROOM4Q9ULL8 1493 aa37.7■■■■□ 3.62
LSM14A-202ENST00000540746 DCAF8L2P0C7V8 631 aa37.01■■■■□ 3.51
LSM14A-202ENST00000540746 DCAF1Q9Y4B6 1507 aa36.88■■■■□ 3.49
LSM14A-202ENST00000540746 SUPT5HO00267 1087 aaKnown RBP36.75■■■■□ 3.47
LSM14A-202ENST00000540746 MYO15BQ96JP2 1530 aa35.99■■■■□ 3.35
LSM14A-202ENST00000540746 SCRIBQ14160 1630 aa35.78■■■■□ 3.32
LSM14A-202ENST00000540746 ABCC9O60706 1549 aa35.74■■■■□ 3.31
LSM14A-202ENST00000540746 CHIC1Q5VXU3 224 aa35.64■■■■□ 3.3
LSM14A-202ENST00000540746 NACADO15069 1562 aa35.56■■■■□ 3.28
LSM14A-202ENST00000540746 RSF1Q96T23 1441 aaPredicted RBP35.28■■■■□ 3.24
LSM14A-202ENST00000540746 RB1CC1Q8TDY2 1594 aa35.04■■■■□ 3.2
LSM14A-202ENST00000540746 CECR2Q9BXF3 1484 aa34.95■■■■□ 3.19
LSM14A-202ENST00000540746 MROH2BQ7Z745 1585 aa34.81■■■■□ 3.16
LSM14A-202ENST00000540746 WIZO95785 1651 aa34.61■■■■□ 3.13
LSM14A-202ENST00000540746 UNC13AQ9UPW8 1703 aa34.59■■■■□ 3.13
LSM14A-202ENST00000540746 LOC105371045A0A1W2PR82 267 aa34.49■■■■□ 3.11
LSM14A-202ENST00000540746 BAZ1AQ9NRL2 1556 aaPredicted RBP34.47■■■■□ 3.11
LSM14A-202ENST00000540746 TRIM41Q8WV44 630 aa34.32■■■■□ 3.08
LSM14A-202ENST00000540746 SMARCA4P51532 1647 aa34.25■■■■□ 3.07
LSM14A-202ENST00000540746 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
LSM14A-202ENST00000540746 TOP2AP11388 1531 aaKnown RBP34.09■■■■□ 3.05
LSM14A-202ENST00000540746 EIF4G1Q04637 1599 aaKnown RBP34.04■■■■□ 3.04
LSM14A-202ENST00000540746 PABPN1Q86U42 306 aaKnown RBP eCLIP34.04■■■■□ 3.04
LSM14A-202ENST00000540746 PCGF6Q9BYE7 350 aa33.99■■■■□ 3.03
LSM14A-202ENST00000540746 FAM9AQ8IZU1 332 aaPredicted RBP33.94■■■■□ 3.02
LSM14A-202ENST00000540746 CCDC88BA6NC98 1476 aa33.89■■■■□ 3.02
LSM14A-202ENST00000540746 SMARCA2P51531 1590 aa33.89■■■■□ 3.02
LSM14A-202ENST00000540746 HRCP23327 699 aa33.76■■■□□ 2.99
LSM14A-202ENST00000540746 PEG3Q9GZU2 1588 aa33.68■■■□□ 2.98
LSM14A-202ENST00000540746 ABCC8Q09428 1581 aa33.64■■■□□ 2.98
LSM14A-202ENST00000540746 EHMT2Q96KQ7 1210 aa33.58■■■□□ 2.97
LSM14A-202ENST00000540746 TRIM26Q12899 539 aaPredicted RBP33.51■■■□□ 2.96
LSM14A-202ENST00000540746 ATAD2BQ9ULI0 1458 aa33.44■■■□□ 2.94
LSM14A-202ENST00000540746 BAZ1BQ9UIG0 1483 aaKnown RBP33.3■■■□□ 2.92
LSM14A-202ENST00000540746 SOGA1O94964 1423 aa33.22■■■□□ 2.91
LSM14A-202ENST00000540746 WRNQ14191 1432 aaPredicted RBP eCLIP33.13■■■□□ 2.89
LSM14A-202ENST00000540746 RUSC2Q8N2Y8 1516 aa33.09■■■□□ 2.89
LSM14A-202ENST00000540746 PPARGC1BQ86YN6 1023 aaKnown RBP33.07■■■□□ 2.89
LSM14A-202ENST00000540746 SYNJ1O43426 1573 aa33.03■■■□□ 2.88
LSM14A-202ENST00000540746 EEA1Q15075 1411 aa33.03■■■□□ 2.88
LSM14A-202ENST00000540746 CSRNP3Q8WYN3 585 aa32.97■■■□□ 2.87
LSM14A-202ENST00000540746 NCAPD3P42695 1498 aa32.9■■■□□ 2.86
LSM14A-202ENST00000540746 HMGXB3Q12766 1538 aa32.88■■■□□ 2.85
LSM14A-202ENST00000540746 TNIKQ9UKE5 1360 aa32.88■■■□□ 2.85
LSM14A-202ENST00000540746 CEP162Q5TB80 1403 aa32.87■■■□□ 2.85
LSM14A-202ENST00000540746 GOLGA3Q08378 1498 aa32.75■■■□□ 2.83
LSM14A-202ENST00000540746 UBTFP17480 764 aaKnown RBP32.72■■■□□ 2.83
LSM14A-202ENST00000540746 TOP2BQ02880 1626 aa32.69■■■□□ 2.82
LSM14A-202ENST00000540746 KIF21BO75037 1637 aa32.65■■■□□ 2.82
LSM14A-202ENST00000540746 CEP164Q9UPV0 1460 aa32.62■■■□□ 2.81
LSM14A-202ENST00000540746 BIVM-ERCC5R4GMW8 1640 aa32.61■■■□□ 2.81
LSM14A-202ENST00000540746 ZEB1P37275 1124 aaPredicted RBP32.56■■■□□ 2.8
LSM14A-202ENST00000540746 CFTRP13569 1480 aa32.51■■■□□ 2.79
LSM14A-202ENST00000540746 RAPGEF2Q9Y4G8 1499 aa32.45■■■□□ 2.79
LSM14A-202ENST00000540746 CUX1P39880 1505 aa32.45■■■□□ 2.78
LSM14A-202ENST00000540746 TTBK1Q5TCY1 1321 aaPredicted RBP32.4■■■□□ 2.78
LSM14A-202ENST00000540746 CLIP1P30622 1438 aa32.34■■■□□ 2.77
LSM14A-202ENST00000540746 PRDM2Q13029 1718 aa32.31■■■□□ 2.76
LSM14A-202ENST00000540746 CC2D2AQ9P2K1 1620 aa32.27■■■□□ 2.76
LSM14A-202ENST00000540746 PRXQ9BXM0 1461 aa32.24■■■□□ 2.75
LSM14A-202ENST00000540746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.22■■■□□ 2.75
LSM14A-202ENST00000540746 ERICH3Q5RHP9 1530 aa32.2■■■□□ 2.74
LSM14A-202ENST00000540746 CADPSQ9ULU8 1353 aa32.18■■■□□ 2.74
LSM14A-202ENST00000540746 VPS8Q8N3P4 1428 aa32.17■■■□□ 2.74
LSM14A-202ENST00000540746 KIF27Q86VH2 1401 aa32.14■■■□□ 2.74
LSM14A-202ENST00000540746 RANGAP1P46060 587 aaPredicted RBP32.09■■■□□ 2.73
LSM14A-202ENST00000540746 CCER1Q8TC90 406 aaPredicted RBP32.08■■■□□ 2.73
LSM14A-202ENST00000540746 ARAP1Q96P48 1450 aa31.93■■■□□ 2.7
LSM14A-202ENST00000540746 CUX2O14529 1486 aa31.91■■■□□ 2.7
LSM14A-202ENST00000540746 FGD5Q6ZNL6 1462 aa31.9■■■□□ 2.7
LSM14A-202ENST00000540746 FANCD2Q9BXW9 1451 aa31.87■■■□□ 2.69
LSM14A-202ENST00000540746 APLP2Q06481 763 aa31.86■■■□□ 2.69
LSM14A-202ENST00000540746 IGF1RP08069 1367 aa31.85■■■□□ 2.69
LSM14A-202ENST00000540746 NESP48681 1621 aa31.77■■■□□ 2.68
LSM14A-202ENST00000540746 ARHGAP35Q9NRY4 1499 aa31.72■■■□□ 2.67
LSM14A-202ENST00000540746 HNRNPUL2Q1KMD3 747 aaKnown RBP31.72■■■□□ 2.67
LSM14A-202ENST00000540746 DNMBPQ6XZF7 1577 aa31.7■■■□□ 2.66
LSM14A-202ENST00000540746 CARMIL1Q5VZK9 1371 aa31.67■■■□□ 2.66
LSM14A-202ENST00000540746 TOPBP1Q92547 1522 aa31.64■■■□□ 2.66
LSM14A-202ENST00000540746 KANK4Q5T7N3 995 aaPredicted RBP31.63■■■□□ 2.65
LSM14A-202ENST00000540746 RAD54L2Q9Y4B4 1467 aa31.61■■■□□ 2.65
LSM14A-202ENST00000540746 POLA1P09884 1462 aaPredicted RBP31.6■■■□□ 2.65
LSM14A-202ENST00000540746 ABCA10Q8WWZ4 1543 aa31.56■■■□□ 2.64
LSM14A-202ENST00000540746 LAMC3Q9Y6N6 1575 aa31.55■■■□□ 2.64
LSM14A-202ENST00000540746 DNAJC5BQ9UF47 199 aa31.5■■■□□ 2.63
LSM14A-202ENST00000540746 URB2Q14146 1524 aaKnown RBP31.46■■■□□ 2.63
LSM14A-202ENST00000540746 RRBP1Q9P2E9 1410 aaKnown RBP31.39■■■□□ 2.61
LSM14A-202ENST00000540746 WDR97A6NE52 1622 aa31.37■■■□□ 2.61
LSM14A-202ENST00000540746 CUL7Q14999 1698 aa31.33■■■□□ 2.61
LSM14A-202ENST00000540746 TIAM1Q13009 1591 aa31.31■■■□□ 2.6
LSM14A-202ENST00000540746 PDS5BQ9NTI5 1447 aa31.3■■■□□ 2.6
LSM14A-202ENST00000540746 MAP3K1Q13233 1512 aa31.29■■■□□ 2.6
LSM14A-202ENST00000540746 KIF21AQ7Z4S6 1674 aa31.28■■■□□ 2.6
LSM14A-202ENST00000540746 ABCA5Q8WWZ7 1642 aa31.24■■■□□ 2.59
LSM14A-202ENST00000540746 CCNB3Q8WWL7 1395 aa31.23■■■□□ 2.59
LSM14A-202ENST00000540746 DIEXFQ68CQ4 756 aaKnown RBP31.23■■■□□ 2.59
LSM14A-202ENST00000540746 P3H3Q8IVL6 736 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms