RNA–Protein interactions for RNA: ENST00000319725.9

FUBP3-201, Transcript of far upstream element binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FUBP3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3-201ENST00000319725 NISCHQ9Y2I1 1504 aa40.36■■■■■ 4.05
FUBP3-201ENST00000319725 SHROOM4Q9ULL8 1493 aa35.83■■■■□ 3.33
FUBP3-201ENST00000319725 SUPT5HO00267 1087 aaKnown RBP35.28■■■■□ 3.24
FUBP3-201ENST00000319725 DCAF8L2P0C7V8 631 aa34.83■■■■□ 3.17
FUBP3-201ENST00000319725 ZCCHC6Q5VYS8 1495 aaKnown RBP34.09■■■■□ 3.05
FUBP3-201ENST00000319725 CCDC180Q9P1Z9 1646 aa34.04■■■■□ 3.04
FUBP3-201ENST00000319725 CHIC1Q5VXU3 224 aa33.9■■■■□ 3.02
FUBP3-201ENST00000319725 MYO15BQ96JP2 1530 aa33.84■■■■□ 3.01
FUBP3-201ENST00000319725 PCGF6Q9BYE7 350 aa33.62■■■□□ 2.97
FUBP3-201ENST00000319725 LOC105371045A0A1W2PR82 267 aa33.37■■■□□ 2.93
FUBP3-201ENST00000319725 HRCP23327 699 aa33.35■■■□□ 2.93
FUBP3-201ENST00000319725 PPARGC1BQ86YN6 1023 aaKnown RBP33.23■■■□□ 2.91
FUBP3-201ENST00000319725 EHMT2Q96KQ7 1210 aa32.97■■■□□ 2.87
FUBP3-201ENST00000319725 FAM9AQ8IZU1 332 aaPredicted RBP32.8■■■□□ 2.84
FUBP3-201ENST00000319725 ABCC9O60706 1549 aa32.67■■■□□ 2.82
FUBP3-201ENST00000319725 DCAF1Q9Y4B6 1507 aa32.65■■■□□ 2.82
FUBP3-201ENST00000319725 TRIM41Q8WV44 630 aa32.49■■■□□ 2.79
FUBP3-201ENST00000319725 SCRIBQ14160 1630 aa32.48■■■□□ 2.79
FUBP3-201ENST00000319725 TRIM26Q12899 539 aaPredicted RBP32.4■■■□□ 2.78
FUBP3-201ENST00000319725 RSF1Q96T23 1441 aaPredicted RBP32.27■■■□□ 2.76
FUBP3-201ENST00000319725 RB1CC1Q8TDY2 1594 aa32.05■■■□□ 2.72
FUBP3-201ENST00000319725 TTBK1Q5TCY1 1321 aaPredicted RBP31.89■■■□□ 2.7
FUBP3-201ENST00000319725 CECR2Q9BXF3 1484 aa31.89■■■□□ 2.69
FUBP3-201ENST00000319725 NACADO15069 1562 aa31.76■■■□□ 2.67
FUBP3-201ENST00000319725 MROH2BQ7Z745 1585 aa31.64■■■□□ 2.66
FUBP3-201ENST00000319725 ZEB1P37275 1124 aaPredicted RBP31.58■■■□□ 2.65
FUBP3-201ENST00000319725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.56■■■□□ 2.64
FUBP3-201ENST00000319725 WIZO95785 1651 aa31.49■■■□□ 2.63
FUBP3-201ENST00000319725 PABPN1Q86U42 306 aaKnown RBP eCLIP31.4■■■□□ 2.62
FUBP3-201ENST00000319725 CCER1Q8TC90 406 aaPredicted RBP31.38■■■□□ 2.61
FUBP3-201ENST00000319725 SCAF1Q9H7N4 1312 aaKnown RBP31.14■■■□□ 2.58
FUBP3-201ENST00000319725 ABCC8Q09428 1581 aa31.13■■■□□ 2.57
FUBP3-201ENST00000319725 UBTFP17480 764 aaKnown RBP31.09■■■□□ 2.57
FUBP3-201ENST00000319725 CCDC88BA6NC98 1476 aa31.02■■■□□ 2.56
FUBP3-201ENST00000319725 RANGAP1P46060 587 aaPredicted RBP31■■■□□ 2.55
FUBP3-201ENST00000319725 SOGA1O94964 1423 aa30.94■■■□□ 2.54
FUBP3-201ENST00000319725 BAZ1AQ9NRL2 1556 aaPredicted RBP30.94■■■□□ 2.54
FUBP3-201ENST00000319725 UNC13AQ9UPW8 1703 aa30.83■■■□□ 2.53
FUBP3-201ENST00000319725 RUSC2Q8N2Y8 1516 aa30.81■■■□□ 2.52
FUBP3-201ENST00000319725 CEP162Q5TB80 1403 aa30.8■■■□□ 2.52
FUBP3-201ENST00000319725 DIEXFQ68CQ4 756 aaKnown RBP30.78■■■□□ 2.52
FUBP3-201ENST00000319725 CSRNP3Q8WYN3 585 aa30.76■■■□□ 2.51
FUBP3-201ENST00000319725 NEUROD1Q13562 356 aa30.73■■■□□ 2.51
FUBP3-201ENST00000319725 HNRNPUL2Q1KMD3 747 aaKnown RBP30.73■■■□□ 2.51
FUBP3-201ENST00000319725 EIF4G1Q04637 1599 aaKnown RBP30.69■■■□□ 2.5
FUBP3-201ENST00000319725 SMARCA4P51532 1647 aa30.68■■■□□ 2.5
FUBP3-201ENST00000319725 TOP2AP11388 1531 aaKnown RBP30.68■■■□□ 2.5
FUBP3-201ENST00000319725 SMARCA2P51531 1590 aa30.63■■■□□ 2.49
FUBP3-201ENST00000319725 YTHDC1Q96MU7 727 aaKnown RBP30.62■■■□□ 2.49
FUBP3-201ENST00000319725 ACIN1Q9UKV3 1341 aaKnown RBP30.58■■■□□ 2.49
FUBP3-201ENST00000319725 BICRAQ9NZM4 1560 aa30.55■■■□□ 2.48
FUBP3-201ENST00000319725 GTF3C3Q9Y5Q9 886 aa30.51■■■□□ 2.47
FUBP3-201ENST00000319725 TNIKQ9UKE5 1360 aa30.5■■■□□ 2.47
FUBP3-201ENST00000319725 WRNQ14191 1432 aaPredicted RBP eCLIP30.4■■■□□ 2.46
FUBP3-201ENST00000319725 CENPBP07199 599 aaPredicted RBP30.37■■■□□ 2.45
FUBP3-201ENST00000319725 APLP2Q06481 763 aa30.34■■■□□ 2.45
FUBP3-201ENST00000319725 GOLGA3Q08378 1498 aa30.31■■■□□ 2.44
FUBP3-201ENST00000319725 ZNF316A6NFI3 1004 aaPredicted RBP30.3■■■□□ 2.44
FUBP3-201ENST00000319725 PELP1Q8IZL8 1130 aaKnown RBP30.25■■■□□ 2.43
FUBP3-201ENST00000319725 CLIP1P30622 1438 aa30.19■■■□□ 2.42
FUBP3-201ENST00000319725 EEA1Q15075 1411 aa30.19■■■□□ 2.42
FUBP3-201ENST00000319725 MIER1Q8N108 512 aa30.15■■■□□ 2.42
FUBP3-201ENST00000319725 SYNJ1O43426 1573 aa30.13■■■□□ 2.41
FUBP3-201ENST00000319725 ATAD2BQ9ULI0 1458 aa30.12■■■□□ 2.41
FUBP3-201ENST00000319725 BAZ1BQ9UIG0 1483 aaKnown RBP30.1■■■□□ 2.41
FUBP3-201ENST00000319725 RAPGEF2Q9Y4G8 1499 aa30.06■■■□□ 2.4
FUBP3-201ENST00000319725 CEP164Q9UPV0 1460 aa30.05■■■□□ 2.4
FUBP3-201ENST00000319725 ITGAEP38570 1179 aa30.01■■■□□ 2.39
FUBP3-201ENST00000319725 VPS8Q8N3P4 1428 aa29.91■■■□□ 2.38
FUBP3-201ENST00000319725 PEG3Q9GZU2 1588 aa29.86■■■□□ 2.37
FUBP3-201ENST00000319725 KANK4Q5T7N3 995 aaPredicted RBP29.85■■■□□ 2.37
FUBP3-201ENST00000319725 KIF21BO75037 1637 aa29.74■■■□□ 2.35
FUBP3-201ENST00000319725 ATP1B4Q9UN42 357 aaPredicted RBP29.62■■■□□ 2.33
FUBP3-201ENST00000319725 DHX57Q6P158 1386 aaKnown RBP29.52■■■□□ 2.32
FUBP3-201ENST00000319725 P3H3Q8IVL6 736 aa29.52■■■□□ 2.32
FUBP3-201ENST00000319725 NCAPD3P42695 1498 aa29.49■■■□□ 2.31
FUBP3-201ENST00000319725 ARAP1Q96P48 1450 aa29.48■■■□□ 2.31
FUBP3-201ENST00000319725 TOP2BQ02880 1626 aa29.47■■■□□ 2.31
FUBP3-201ENST00000319725 PRXQ9BXM0 1461 aa29.38■■■□□ 2.29
FUBP3-201ENST00000319725 FAM50AQ14320 339 aaKnown RBP29.37■■■□□ 2.29
FUBP3-201ENST00000319725 KIF27Q86VH2 1401 aa29.36■■■□□ 2.29
FUBP3-201ENST00000319725 CUX1P39880 1505 aa29.36■■■□□ 2.29
FUBP3-201ENST00000319725 KCNH8Q96L42 1107 aa29.34■■■□□ 2.29
FUBP3-201ENST00000319725 HMGXB3Q12766 1538 aa29.32■■■□□ 2.28
FUBP3-201ENST00000319725 HIRIP3Q9BW71 556 aaPredicted RBP29.3■■■□□ 2.28
FUBP3-201ENST00000319725 CCNB3Q8WWL7 1395 aa29.28■■■□□ 2.28
FUBP3-201ENST00000319725 SIN3AQ96ST3 1273 aa29.24■■■□□ 2.27
FUBP3-201ENST00000319725 ARHGAP35Q9NRY4 1499 aa29.22■■■□□ 2.27
FUBP3-201ENST00000319725 CUX2O14529 1486 aa29.21■■■□□ 2.27
FUBP3-201ENST00000319725 BIVM-ERCC5R4GMW8 1640 aa29.2■■■□□ 2.27
FUBP3-201ENST00000319725 ERICH3Q5RHP9 1530 aa29.19■■■□□ 2.26
FUBP3-201ENST00000319725 CFTRP13569 1480 aa29.19■■■□□ 2.26
FUBP3-201ENST00000319725 BCANQ96GW7 911 aa29.17■■■□□ 2.26
FUBP3-201ENST00000319725 RAB3GAP2Q9H2M9 1393 aa29.16■■■□□ 2.26
FUBP3-201ENST00000319725 DDX10Q13206 875 aaKnown RBP29.14■■■□□ 2.26
FUBP3-201ENST00000319725 CLSPNQ9HAW4 1339 aa29.14■■■□□ 2.26
FUBP3-201ENST00000319725 SUPT16HQ9Y5B9 1047 aaKnown RBP29.13■■■□□ 2.25
FUBP3-201ENST00000319725 RRBP1Q9P2E9 1410 aaKnown RBP29.11■■■□□ 2.25
FUBP3-201ENST00000319725 CC2D2AQ9P2K1 1620 aa29.1■■■□□ 2.25
FUBP3-201ENST00000319725 CADPSQ9ULU8 1353 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms