Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 PVT1_1.1-201ENST00000615125 194 ntBASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC71LQ8N9Z2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 AC004687.1-201ENST00000579003 1625 ntBASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 Z98882.1-201ENST00000622160 2253 ntBASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
CCDC71LQ8N9Z2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71LQ8N9Z2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71LQ8N9Z2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71LQ8N9Z2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71LQ8N9Z2 MIR6722-201ENST00000617286 78 ntBASIC17.91■□□□□ 0.46
CCDC71LQ8N9Z2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC71LQ8N9Z2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71LQ8N9Z2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71LQ8N9Z2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC71LQ8N9Z2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC71LQ8N9Z2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 AC010980.1-201ENST00000587192 1142 ntBASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 NTF6A-201ENST00000591175 560 ntBASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC71LQ8N9Z2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 ABHD17AP5-201ENST00000580133 923 ntBASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 HSD17B1P1-201ENST00000590052 955 ntBASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms