RNA–Protein interactions for RNA: ENST00000544814.5

SSUH2-217, Transcript of ssu-2 homolog (C. elegans), humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSUH2, Length 1,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-217ENST00000544814 NISCHQ9Y2I1 1504 aa50.16■■■■■ 5.62
SSUH2-217ENST00000544814 CCDC180Q9P1Z9 1646 aa43.93■■■■■ 4.62
SSUH2-217ENST00000544814 ZCCHC6Q5VYS8 1495 aaKnown RBP42.04■■■■■ 4.32
SSUH2-217ENST00000544814 ABCC9O60706 1549 aa41.93■■■■■ 4.3
SSUH2-217ENST00000544814 DCAF8L2P0C7V8 631 aa41.58■■■■■ 4.25
SSUH2-217ENST00000544814 DCAF1Q9Y4B6 1507 aa41.53■■■■■ 4.24
SSUH2-217ENST00000544814 MYO15BQ96JP2 1530 aa41.23■■■■■ 4.19
SSUH2-217ENST00000544814 NACADO15069 1562 aa41.08■■■■■ 4.17
SSUH2-217ENST00000544814 RB1CC1Q8TDY2 1594 aa40.82■■■■■ 4.13
SSUH2-217ENST00000544814 SHROOM4Q9ULL8 1493 aa40.52■■■■■ 4.08
SSUH2-217ENST00000544814 SCRIBQ14160 1630 aa40.27■■■■■ 4.04
SSUH2-217ENST00000544814 UNC13AQ9UPW8 1703 aa39.78■■■■□ 3.96
SSUH2-217ENST00000544814 BICRAQ9NZM4 1560 aa39.51■■■■□ 3.92
SSUH2-217ENST00000544814 PABPN1Q86U42 306 aaKnown RBP eCLIP39.47■■■■□ 3.914e-7■■■□□ 16.6
SSUH2-217ENST00000544814 CECR2Q9BXF3 1484 aa38.96■■■■□ 3.83
SSUH2-217ENST00000544814 SUPT5HO00267 1087 aaKnown RBP38.83■■■■□ 3.81
SSUH2-217ENST00000544814 BAZ1AQ9NRL2 1556 aaPredicted RBP38.79■■■■□ 3.8
SSUH2-217ENST00000544814 RSF1Q96T23 1441 aaPredicted RBP38.74■■■■□ 3.79
SSUH2-217ENST00000544814 MROH2BQ7Z745 1585 aa38.69■■■■□ 3.78
SSUH2-217ENST00000544814 SMARCA4P51532 1647 aa38.62■■■■□ 3.77
SSUH2-217ENST00000544814 EIF4G1Q04637 1599 aaKnown RBP38.39■■■■□ 3.74
SSUH2-217ENST00000544814 WIZO95785 1651 aa38.3■■■■□ 3.72
SSUH2-217ENST00000544814 PEG3Q9GZU2 1588 aa38.21■■■■□ 3.71
SSUH2-217ENST00000544814 ATAD2BQ9ULI0 1458 aa38.14■■■■□ 3.7
SSUH2-217ENST00000544814 SMARCA2P51531 1590 aa38.13■■■■□ 3.69
SSUH2-217ENST00000544814 TOP2AP11388 1531 aaKnown RBP37.99■■■■□ 3.67
SSUH2-217ENST00000544814 NCAPD3P42695 1498 aa37.93■■■■□ 3.66
SSUH2-217ENST00000544814 CC2D2AQ9P2K1 1620 aa37.92■■■■□ 3.66
SSUH2-217ENST00000544814 BAZ1BQ9UIG0 1483 aaKnown RBP37.91■■■■□ 3.66
SSUH2-217ENST00000544814 HMGXB3Q12766 1538 aa37.8■■■■□ 3.64
SSUH2-217ENST00000544814 CCDC88BA6NC98 1476 aa37.58■■■■□ 3.61
SSUH2-217ENST00000544814 DNAJC5BQ9UF47 199 aa37.36■■■■□ 3.57
SSUH2-217ENST00000544814 CHIC1Q5VXU3 224 aa36.96■■■■□ 3.51
SSUH2-217ENST00000544814 CFTRP13569 1480 aa36.94■■■■□ 3.5
SSUH2-217ENST00000544814 CADPSQ9ULU8 1353 aa36.93■■■■□ 3.5
SSUH2-217ENST00000544814 LAMC3Q9Y6N6 1575 aa36.68■■■■□ 3.46
SSUH2-217ENST00000544814 NESP48681 1621 aa36.64■■■■□ 3.46
SSUH2-217ENST00000544814 TRIM41Q8WV44 630 aa36.61■■■■□ 3.45
SSUH2-217ENST00000544814 PRDM2Q13029 1718 aa36.59■■■■□ 3.45
SSUH2-217ENST00000544814 ABCC8Q09428 1581 aa36.57■■■■□ 3.44
SSUH2-217ENST00000544814 WRNQ14191 1432 aaPredicted RBP eCLIP36.5■■■■□ 3.43
SSUH2-217ENST00000544814 FANCD2Q9BXW9 1451 aa36.48■■■■□ 3.43
SSUH2-217ENST00000544814 PDS5BQ9NTI5 1447 aa36.47■■■■□ 3.43
SSUH2-217ENST00000544814 CEP164Q9UPV0 1460 aa36.31■■■■□ 3.4
SSUH2-217ENST00000544814 SYNJ1O43426 1573 aa36.27■■■■□ 3.4
SSUH2-217ENST00000544814 TOP2BQ02880 1626 aa36.22■■■■□ 3.39
SSUH2-217ENST00000544814 CUX1P39880 1505 aa36.21■■■■□ 3.39
SSUH2-217ENST00000544814 BIVM-ERCC5R4GMW8 1640 aa36.16■■■■□ 3.38
SSUH2-217ENST00000544814 KIF21AQ7Z4S6 1674 aa36.14■■■■□ 3.38
SSUH2-217ENST00000544814 DNMBPQ6XZF7 1577 aa36.06■■■■□ 3.36
SSUH2-217ENST00000544814 ERCC6Q03468 1493 aa36.05■■■■□ 3.36
SSUH2-217ENST00000544814 TOPBP1Q92547 1522 aa36.02■■■■□ 3.36
SSUH2-217ENST00000544814 URB2Q14146 1524 aaKnown RBP36.01■■■■□ 3.36
SSUH2-217ENST00000544814 MRC2Q9UBG0 1479 aa35.99■■■■□ 3.35
SSUH2-217ENST00000544814 FGD5Q6ZNL6 1462 aa35.91■■■■□ 3.34
SSUH2-217ENST00000544814 FAM9AQ8IZU1 332 aaPredicted RBP35.85■■■■□ 3.33
SSUH2-217ENST00000544814 SOGA1O94964 1423 aa35.85■■■■□ 3.33
SSUH2-217ENST00000544814 POLA1P09884 1462 aaPredicted RBP35.81■■■■□ 3.32
SSUH2-217ENST00000544814 EEA1Q15075 1411 aa35.8■■■■□ 3.32
SSUH2-217ENST00000544814 WDR62O43379 1518 aa35.78■■■■□ 3.32
SSUH2-217ENST00000544814 THOC2Q8NI27 1593 aaKnown RBP35.72■■■■□ 3.31
SSUH2-217ENST00000544814 RUSC2Q8N2Y8 1516 aa35.69■■■■□ 3.3
SSUH2-217ENST00000544814 RAD54L2Q9Y4B4 1467 aa35.66■■■■□ 3.3
SSUH2-217ENST00000544814 KIF27Q86VH2 1401 aa35.65■■■■□ 3.3
SSUH2-217ENST00000544814 CSRNP3Q8WYN3 585 aa35.63■■■■□ 3.29
SSUH2-217ENST00000544814 CUX2O14529 1486 aa35.61■■■■□ 3.29
SSUH2-217ENST00000544814 ABCA10Q8WWZ4 1543 aa35.61■■■■□ 3.29
SSUH2-217ENST00000544814 IFT140Q96RY7 1462 aa35.5■■■■□ 3.27
SSUH2-217ENST00000544814 TARBP1Q13395 1621 aaKnown RBP35.48■■■■□ 3.27
SSUH2-217ENST00000544814 LOC105371045A0A1W2PR82 267 aa35.47■■■■□ 3.27
SSUH2-217ENST00000544814 WDR97A6NE52 1622 aa35.43■■■■□ 3.26
SSUH2-217ENST00000544814 TDRD9Q8NDG6 1382 aaKnown RBP35.4■■■■□ 3.26
SSUH2-217ENST00000544814 IGF1RP08069 1367 aa35.36■■■■□ 3.25
SSUH2-217ENST00000544814 GAPVD1Q14C86 1478 aa35.32■■■■□ 3.24
SSUH2-217ENST00000544814 ABCA5Q8WWZ7 1642 aa35.31■■■■□ 3.24
SSUH2-217ENST00000544814 EHMT2Q96KQ7 1210 aa35.3■■■■□ 3.24
SSUH2-217ENST00000544814 KIF21BO75037 1637 aa35.26■■■■□ 3.24
SSUH2-217ENST00000544814 PRXQ9BXM0 1461 aa35.26■■■■□ 3.24
SSUH2-217ENST00000544814 GOLGA3Q08378 1498 aa35.23■■■■□ 3.23
SSUH2-217ENST00000544814 AQRO60306 1485 aaKnown RBP eCLIP35.23■■■■□ 3.231e-6■■■■□ 21.5
SSUH2-217ENST00000544814 ZNF608Q9ULD9 1512 aaPredicted RBP35.23■■■■□ 3.23
SSUH2-217ENST00000544814 ERICH3Q5RHP9 1530 aa35.2■■■■□ 3.23
SSUH2-217ENST00000544814 CARMIL1Q5VZK9 1371 aa35.18■■■■□ 3.22
SSUH2-217ENST00000544814 RAPGEF2Q9Y4G8 1499 aa35.14■■■■□ 3.22
SSUH2-217ENST00000544814 GRIN2BQ13224 1484 aa35.13■■■■□ 3.21
SSUH2-217ENST00000544814 UBTFP17480 764 aaKnown RBP35.12■■■■□ 3.21
SSUH2-217ENST00000544814 CUL7Q14999 1698 aa35.09■■■■□ 3.21
SSUH2-217ENST00000544814 EIF4G3O43432 1585 aaKnown RBP35.09■■■■□ 3.21
SSUH2-217ENST00000544814 TNIKQ9UKE5 1360 aa35.06■■■■□ 3.2
SSUH2-217ENST00000544814 PBRM1Q86U86 1689 aa35.03■■■■□ 3.2
SSUH2-217ENST00000544814 FHAD1B1AJZ9 1412 aa34.96■■■■□ 3.19
SSUH2-217ENST00000544814 SNAPC4Q5SXM2 1469 aa34.9■■■■□ 3.18
SSUH2-217ENST00000544814 MAGI1Q96QZ7 1491 aaPredicted RBP34.89■■■■□ 3.18
SSUH2-217ENST00000544814 ADAMTS12P58397 1594 aa34.88■■■■□ 3.17
SSUH2-217ENST00000544814 CEP162Q5TB80 1403 aa34.79■■■■□ 3.16
SSUH2-217ENST00000544814 SYNJ2O15056 1496 aa34.75■■■■□ 3.15
SSUH2-217ENST00000544814 CHMP7Q8WUX9 453 aaPredicted RBP34.73■■■■□ 3.15
SSUH2-217ENST00000544814 GRIN2AQ12879 1464 aa34.67■■■■□ 3.14
SSUH2-217ENST00000544814 CLIP1P30622 1438 aa34.65■■■■□ 3.14
SSUH2-217ENST00000544814 FBLN2P98095 1184 aa34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms