Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
HS3ST3A1Q9Y663 AC087741.3-201ENST00000624270 1347 ntBASIC27.01■■□□□ 1.91
HS3ST3A1Q9Y663 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.91
HS3ST3A1Q9Y663 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.01■■□□□ 1.91
HS3ST3A1Q9Y663 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27■■□□□ 1.91
HS3ST3A1Q9Y663 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.99■■□□□ 1.91
HS3ST3A1Q9Y663 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.98■■□□□ 1.91
HS3ST3A1Q9Y663 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.98■■□□□ 1.91
HS3ST3A1Q9Y663 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
HS3ST3A1Q9Y663 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
HS3ST3A1Q9Y663 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
HS3ST3A1Q9Y663 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
HS3ST3A1Q9Y663 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.97■■□□□ 1.91
HS3ST3A1Q9Y663 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
HS3ST3A1Q9Y663 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
HS3ST3A1Q9Y663 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.95■■□□□ 1.9
HS3ST3A1Q9Y663 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
HS3ST3A1Q9Y663 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
HS3ST3A1Q9Y663 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
HS3ST3A1Q9Y663 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
HS3ST3A1Q9Y663 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
HS3ST3A1Q9Y663 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
HS3ST3A1Q9Y663 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
HS3ST3A1Q9Y663 AC044849.2-201ENST00000606596 710 ntBASIC26.92■■□□□ 1.9
HS3ST3A1Q9Y663 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.92■■□□□ 1.9
HS3ST3A1Q9Y663 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
HS3ST3A1Q9Y663 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
HS3ST3A1Q9Y663 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
HS3ST3A1Q9Y663 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
HS3ST3A1Q9Y663 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
HS3ST3A1Q9Y663 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
HS3ST3A1Q9Y663 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
HS3ST3A1Q9Y663 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
HS3ST3A1Q9Y663 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.89■■□□□ 1.9
HS3ST3A1Q9Y663 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
HS3ST3A1Q9Y663 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
HS3ST3A1Q9Y663 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.86■■□□□ 1.89
HS3ST3A1Q9Y663 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
HS3ST3A1Q9Y663 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
HS3ST3A1Q9Y663 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
HS3ST3A1Q9Y663 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
HS3ST3A1Q9Y663 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
HS3ST3A1Q9Y663 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.82■■□□□ 1.88
HS3ST3A1Q9Y663 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
HS3ST3A1Q9Y663 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.82■■□□□ 1.88
HS3ST3A1Q9Y663 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.82■■□□□ 1.88
HS3ST3A1Q9Y663 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
HS3ST3A1Q9Y663 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
HS3ST3A1Q9Y663 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
HS3ST3A1Q9Y663 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.79■■□□□ 1.88
HS3ST3A1Q9Y663 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
HS3ST3A1Q9Y663 ABHD17AP4-201ENST00000411545 909 ntBASIC26.78■■□□□ 1.88
HS3ST3A1Q9Y663 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.78■■□□□ 1.88
HS3ST3A1Q9Y663 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
HS3ST3A1Q9Y663 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
HS3ST3A1Q9Y663 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
HS3ST3A1Q9Y663 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
HS3ST3A1Q9Y663 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
HS3ST3A1Q9Y663 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
HS3ST3A1Q9Y663 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.75■■□□□ 1.87
HS3ST3A1Q9Y663 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
HS3ST3A1Q9Y663 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
HS3ST3A1Q9Y663 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
HS3ST3A1Q9Y663 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.73■■□□□ 1.87
HS3ST3A1Q9Y663 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
HS3ST3A1Q9Y663 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
HS3ST3A1Q9Y663 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.69■■□□□ 1.86
HS3ST3A1Q9Y663 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.68■■□□□ 1.86
HS3ST3A1Q9Y663 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
HS3ST3A1Q9Y663 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
HS3ST3A1Q9Y663 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HS3ST3A1Q9Y663 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
HS3ST3A1Q9Y663 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
HS3ST3A1Q9Y663 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
HS3ST3A1Q9Y663 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
HS3ST3A1Q9Y663 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
HS3ST3A1Q9Y663 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
HS3ST3A1Q9Y663 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
HS3ST3A1Q9Y663 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.64■■□□□ 1.86
HS3ST3A1Q9Y663 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.64■■□□□ 1.86
HS3ST3A1Q9Y663 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
HS3ST3A1Q9Y663 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.63■■□□□ 1.85
HS3ST3A1Q9Y663 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
HS3ST3A1Q9Y663 AC120057.4-201ENST00000624722 1615 ntBASIC26.62■■□□□ 1.85
HS3ST3A1Q9Y663 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.62■■□□□ 1.85
HS3ST3A1Q9Y663 MIR7108-201ENST00000614319 87 ntBASIC26.62■■□□□ 1.85
HS3ST3A1Q9Y663 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.62■■□□□ 1.85
HS3ST3A1Q9Y663 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
HS3ST3A1Q9Y663 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.6■■□□□ 1.85
HS3ST3A1Q9Y663 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.6■■□□□ 1.85
HS3ST3A1Q9Y663 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.59■■□□□ 1.85
HS3ST3A1Q9Y663 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
HS3ST3A1Q9Y663 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
HS3ST3A1Q9Y663 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.58■■□□□ 1.85
HS3ST3A1Q9Y663 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.58■■□□□ 1.85
HS3ST3A1Q9Y663 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
HS3ST3A1Q9Y663 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HS3ST3A1Q9Y663 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HS3ST3A1Q9Y663 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HS3ST3A1Q9Y663 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms