Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.99■■□□□ 1.59
HRH3Q9Y5N1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
HRH3Q9Y5N1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
HRH3Q9Y5N1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HRH3Q9Y5N1 AC120057.4-201ENST00000624722 1615 ntBASIC24.96■■□□□ 1.59
HRH3Q9Y5N1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.95■■□□□ 1.58
HRH3Q9Y5N1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
HRH3Q9Y5N1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.94■■□□□ 1.58
HRH3Q9Y5N1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.94■■□□□ 1.58
HRH3Q9Y5N1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
HRH3Q9Y5N1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
HRH3Q9Y5N1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.94■■□□□ 1.58
HRH3Q9Y5N1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HRH3Q9Y5N1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HRH3Q9Y5N1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
HRH3Q9Y5N1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
HRH3Q9Y5N1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
HRH3Q9Y5N1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HRH3Q9Y5N1 AL162393.1-201ENST00000437852 946 ntBASIC24.89■■□□□ 1.58
HRH3Q9Y5N1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
HRH3Q9Y5N1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
HRH3Q9Y5N1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.88■■□□□ 1.57
HRH3Q9Y5N1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
HRH3Q9Y5N1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.87■■□□□ 1.57
HRH3Q9Y5N1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
HRH3Q9Y5N1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.85■■□□□ 1.57
HRH3Q9Y5N1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
HRH3Q9Y5N1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HRH3Q9Y5N1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
HRH3Q9Y5N1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HRH3Q9Y5N1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HRH3Q9Y5N1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
HRH3Q9Y5N1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.82■■□□□ 1.56
HRH3Q9Y5N1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
HRH3Q9Y5N1 WASH5P-204ENST00000632292 975 ntBASIC24.82■■□□□ 1.56
HRH3Q9Y5N1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HRH3Q9Y5N1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HRH3Q9Y5N1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HRH3Q9Y5N1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
HRH3Q9Y5N1 AP006261.1-201ENST00000584783 668 ntBASIC24.8■■□□□ 1.56
HRH3Q9Y5N1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.8■■□□□ 1.56
HRH3Q9Y5N1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.8■■□□□ 1.56
HRH3Q9Y5N1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
HRH3Q9Y5N1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HRH3Q9Y5N1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.79■■□□□ 1.56
HRH3Q9Y5N1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
HRH3Q9Y5N1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HRH3Q9Y5N1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
HRH3Q9Y5N1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HRH3Q9Y5N1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
HRH3Q9Y5N1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HRH3Q9Y5N1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HRH3Q9Y5N1 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.76■■□□□ 1.55
HRH3Q9Y5N1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HRH3Q9Y5N1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HRH3Q9Y5N1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.74■■□□□ 1.55
HRH3Q9Y5N1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
HRH3Q9Y5N1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
HRH3Q9Y5N1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HRH3Q9Y5N1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
HRH3Q9Y5N1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.71■■□□□ 1.55
HRH3Q9Y5N1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.71■■□□□ 1.55
HRH3Q9Y5N1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.71■■□□□ 1.55
HRH3Q9Y5N1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.69■■□□□ 1.54
HRH3Q9Y5N1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
HRH3Q9Y5N1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.69■■□□□ 1.54
HRH3Q9Y5N1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
HRH3Q9Y5N1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
HRH3Q9Y5N1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
HRH3Q9Y5N1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
HRH3Q9Y5N1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
HRH3Q9Y5N1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HRH3Q9Y5N1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HRH3Q9Y5N1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HRH3Q9Y5N1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
HRH3Q9Y5N1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.64■■□□□ 1.54
HRH3Q9Y5N1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
HRH3Q9Y5N1 MIR3665-201ENST00000578708 105 ntBASIC24.63■■□□□ 1.53
HRH3Q9Y5N1 DUX4L28-201ENST00000623687 678 ntBASIC24.63■■□□□ 1.53
HRH3Q9Y5N1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HRH3Q9Y5N1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
HRH3Q9Y5N1 MIR762-201ENST00000390236 83 ntBASIC24.62■■□□□ 1.53
HRH3Q9Y5N1 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.61■■□□□ 1.53
HRH3Q9Y5N1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
HRH3Q9Y5N1 AC087741.3-201ENST00000624270 1347 ntBASIC24.6■■□□□ 1.53
HRH3Q9Y5N1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
HRH3Q9Y5N1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
HRH3Q9Y5N1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.59■■□□□ 1.53
HRH3Q9Y5N1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
HRH3Q9Y5N1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
HRH3Q9Y5N1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.58■■□□□ 1.53
HRH3Q9Y5N1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
HRH3Q9Y5N1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
HRH3Q9Y5N1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.57■■□□□ 1.52
HRH3Q9Y5N1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
HRH3Q9Y5N1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
HRH3Q9Y5N1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.55■■□□□ 1.52
HRH3Q9Y5N1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
HRH3Q9Y5N1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.54■■□□□ 1.52
HRH3Q9Y5N1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms