Protein–RNA interactions for Protein: Q9Y5A7

NUB1, NEDD8 ultimate buster 1, humanhuman

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1Q9Y5A7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.53■■■□□ 2.32
NUB1Q9Y5A7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
NUB1Q9Y5A7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
NUB1Q9Y5A7 AC120057.4-201ENST00000624722 1615 ntBASIC29.5■■■□□ 2.31
NUB1Q9Y5A7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.5■■■□□ 2.31
NUB1Q9Y5A7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.5■■■□□ 2.31
NUB1Q9Y5A7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
NUB1Q9Y5A7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
NUB1Q9Y5A7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
NUB1Q9Y5A7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
NUB1Q9Y5A7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
NUB1Q9Y5A7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
NUB1Q9Y5A7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
NUB1Q9Y5A7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
NUB1Q9Y5A7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
NUB1Q9Y5A7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
NUB1Q9Y5A7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
NUB1Q9Y5A7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
NUB1Q9Y5A7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
NUB1Q9Y5A7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.43■■■□□ 2.3
NUB1Q9Y5A7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
NUB1Q9Y5A7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
NUB1Q9Y5A7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
NUB1Q9Y5A7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
NUB1Q9Y5A7 RPS2P35-201ENST00000443417 897 ntBASIC29.41■■■□□ 2.3
NUB1Q9Y5A7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
NUB1Q9Y5A7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
NUB1Q9Y5A7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
NUB1Q9Y5A7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.38■■■□□ 2.29
NUB1Q9Y5A7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
NUB1Q9Y5A7 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.37■■■□□ 2.29
NUB1Q9Y5A7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
NUB1Q9Y5A7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.36■■■□□ 2.29
NUB1Q9Y5A7 AP006261.1-201ENST00000584783 668 ntBASIC29.36■■■□□ 2.29
NUB1Q9Y5A7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
NUB1Q9Y5A7 WASH5P-204ENST00000632292 975 ntBASIC29.34■■■□□ 2.29
NUB1Q9Y5A7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
NUB1Q9Y5A7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
NUB1Q9Y5A7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
NUB1Q9Y5A7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
NUB1Q9Y5A7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.31■■■□□ 2.28
NUB1Q9Y5A7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
NUB1Q9Y5A7 AL162393.1-201ENST00000437852 946 ntBASIC29.3■■■□□ 2.28
NUB1Q9Y5A7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
NUB1Q9Y5A7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
NUB1Q9Y5A7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
NUB1Q9Y5A7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NUB1Q9Y5A7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NUB1Q9Y5A7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.26■■■□□ 2.27
NUB1Q9Y5A7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.26■■■□□ 2.27
NUB1Q9Y5A7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.25■■■□□ 2.27
NUB1Q9Y5A7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
NUB1Q9Y5A7 MIR762-201ENST00000390236 83 ntBASIC29.23■■■□□ 2.27
NUB1Q9Y5A7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
NUB1Q9Y5A7 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.22■■■□□ 2.27
NUB1Q9Y5A7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
NUB1Q9Y5A7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
NUB1Q9Y5A7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
NUB1Q9Y5A7 MIR3665-201ENST00000578708 105 ntBASIC29.21■■■□□ 2.27
NUB1Q9Y5A7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.2■■■□□ 2.26
NUB1Q9Y5A7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
NUB1Q9Y5A7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.19■■■□□ 2.26
NUB1Q9Y5A7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
NUB1Q9Y5A7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.18■■■□□ 2.26
NUB1Q9Y5A7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
NUB1Q9Y5A7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.17■■■□□ 2.26
NUB1Q9Y5A7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
NUB1Q9Y5A7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
NUB1Q9Y5A7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
NUB1Q9Y5A7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
NUB1Q9Y5A7 AC005559.1-201ENST00000589661 871 ntBASIC29.14■■■□□ 2.26
NUB1Q9Y5A7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.14■■■□□ 2.26
NUB1Q9Y5A7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
NUB1Q9Y5A7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
NUB1Q9Y5A7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.12■■■□□ 2.25
NUB1Q9Y5A7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.12■■■□□ 2.25
NUB1Q9Y5A7 DUX4L28-201ENST00000623687 678 ntBASIC29.11■■■□□ 2.25
NUB1Q9Y5A7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
NUB1Q9Y5A7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
NUB1Q9Y5A7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
NUB1Q9Y5A7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
NUB1Q9Y5A7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
NUB1Q9Y5A7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.08■■■□□ 2.25
NUB1Q9Y5A7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.08■■■□□ 2.25
NUB1Q9Y5A7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
NUB1Q9Y5A7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
NUB1Q9Y5A7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
NUB1Q9Y5A7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.05■■■□□ 2.24
NUB1Q9Y5A7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
NUB1Q9Y5A7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
NUB1Q9Y5A7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
NUB1Q9Y5A7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.03■■■□□ 2.24
NUB1Q9Y5A7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
NUB1Q9Y5A7 AC087741.3-201ENST00000624270 1347 ntBASIC29.02■■■□□ 2.24
NUB1Q9Y5A7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.02■■■□□ 2.24
NUB1Q9Y5A7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.01■■■□□ 2.23
NUB1Q9Y5A7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
NUB1Q9Y5A7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29■■■□□ 2.23
NUB1Q9Y5A7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29■■■□□ 2.23
NUB1Q9Y5A7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms