Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHCHD1Q96BP2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CHCHD1Q96BP2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHCHD1Q96BP2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
CHCHD1Q96BP2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHCHD1Q96BP2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.95■□□□□ 0.78
CHCHD1Q96BP2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHCHD1Q96BP2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHCHD1Q96BP2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CHCHD1Q96BP2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHCHD1Q96BP2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHCHD1Q96BP2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHCHD1Q96BP2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHCHD1Q96BP2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHCHD1Q96BP2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHCHD1Q96BP2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CHCHD1Q96BP2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHCHD1Q96BP2 AC120057.4-201ENST00000624722 1615 ntBASIC19.91■□□□□ 0.78
CHCHD1Q96BP2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHCHD1Q96BP2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHCHD1Q96BP2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHCHD1Q96BP2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHCHD1Q96BP2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHCHD1Q96BP2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.88■□□□□ 0.77
CHCHD1Q96BP2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.88■□□□□ 0.77
CHCHD1Q96BP2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHCHD1Q96BP2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.86■□□□□ 0.77
CHCHD1Q96BP2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHCHD1Q96BP2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHCHD1Q96BP2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHCHD1Q96BP2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHCHD1Q96BP2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHCHD1Q96BP2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHCHD1Q96BP2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHCHD1Q96BP2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHCHD1Q96BP2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHCHD1Q96BP2 AC142086.6-201ENST00000621154 1765 ntBASIC19.84■□□□□ 0.77
CHCHD1Q96BP2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHCHD1Q96BP2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.84■□□□□ 0.77
CHCHD1Q96BP2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHCHD1Q96BP2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.82■□□□□ 0.76
CHCHD1Q96BP2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHCHD1Q96BP2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHCHD1Q96BP2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHCHD1Q96BP2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHCHD1Q96BP2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC19.8■□□□□ 0.76
CHCHD1Q96BP2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.8■□□□□ 0.76
CHCHD1Q96BP2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHCHD1Q96BP2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CHCHD1Q96BP2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CHCHD1Q96BP2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHCHD1Q96BP2 AC135731.1-201ENST00000569415 2548 ntBASIC19.78■□□□□ 0.76
CHCHD1Q96BP2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.78■□□□□ 0.76
CHCHD1Q96BP2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.77■□□□□ 0.76
CHCHD1Q96BP2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHCHD1Q96BP2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD1Q96BP2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD1Q96BP2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD1Q96BP2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD1Q96BP2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.75■□□□□ 0.75
CHCHD1Q96BP2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHCHD1Q96BP2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHCHD1Q96BP2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.73■□□□□ 0.75
CHCHD1Q96BP2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD1Q96BP2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD1Q96BP2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD1Q96BP2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHCHD1Q96BP2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHCHD1Q96BP2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHCHD1Q96BP2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHCHD1Q96BP2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHCHD1Q96BP2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.7■□□□□ 0.74
CHCHD1Q96BP2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHCHD1Q96BP2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHCHD1Q96BP2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHCHD1Q96BP2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHCHD1Q96BP2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHCHD1Q96BP2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHCHD1Q96BP2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHCHD1Q96BP2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHCHD1Q96BP2 ST7-AS1-201ENST00000456775 1889 ntBASIC19.66■□□□□ 0.74
CHCHD1Q96BP2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHCHD1Q96BP2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHCHD1Q96BP2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD1Q96BP2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD1Q96BP2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD1Q96BP2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.64■□□□□ 0.73
CHCHD1Q96BP2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD1Q96BP2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.63■□□□□ 0.73
CHCHD1Q96BP2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHCHD1Q96BP2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHCHD1Q96BP2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.63■□□□□ 0.73
CHCHD1Q96BP2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHCHD1Q96BP2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CHCHD1Q96BP2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.62■□□□□ 0.73
CHCHD1Q96BP2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHCHD1Q96BP2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHCHD1Q96BP2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CHCHD1Q96BP2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHCHD1Q96BP2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms