Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DYNC2LI1Q8TCX1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.37■■□□□ 1.49
DYNC2LI1Q8TCX1 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
DYNC2LI1Q8TCX1 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DYNC2LI1Q8TCX1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
DYNC2LI1Q8TCX1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
DYNC2LI1Q8TCX1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
DYNC2LI1Q8TCX1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.32■■□□□ 1.48
DYNC2LI1Q8TCX1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.32■■□□□ 1.48
DYNC2LI1Q8TCX1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DYNC2LI1Q8TCX1 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
DYNC2LI1Q8TCX1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.31■■□□□ 1.48
DYNC2LI1Q8TCX1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
DYNC2LI1Q8TCX1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
DYNC2LI1Q8TCX1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
DYNC2LI1Q8TCX1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
DYNC2LI1Q8TCX1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.29■■□□□ 1.48
DYNC2LI1Q8TCX1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
DYNC2LI1Q8TCX1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.28■■□□□ 1.48
DYNC2LI1Q8TCX1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
DYNC2LI1Q8TCX1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
DYNC2LI1Q8TCX1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
DYNC2LI1Q8TCX1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
DYNC2LI1Q8TCX1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
DYNC2LI1Q8TCX1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
DYNC2LI1Q8TCX1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DYNC2LI1Q8TCX1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.22■■□□□ 1.47
DYNC2LI1Q8TCX1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.22■■□□□ 1.47
DYNC2LI1Q8TCX1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.21■■□□□ 1.47
DYNC2LI1Q8TCX1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.2■■□□□ 1.46
DYNC2LI1Q8TCX1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
DYNC2LI1Q8TCX1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
DYNC2LI1Q8TCX1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
DYNC2LI1Q8TCX1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.18■■□□□ 1.46
DYNC2LI1Q8TCX1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DYNC2LI1Q8TCX1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.18■■□□□ 1.46
DYNC2LI1Q8TCX1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
DYNC2LI1Q8TCX1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
DYNC2LI1Q8TCX1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DYNC2LI1Q8TCX1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
DYNC2LI1Q8TCX1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DYNC2LI1Q8TCX1 AC142086.6-201ENST00000621154 1765 ntBASIC24.16■■□□□ 1.46
DYNC2LI1Q8TCX1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC24.15■■□□□ 1.46
DYNC2LI1Q8TCX1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
DYNC2LI1Q8TCX1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC24.14■■□□□ 1.46
DYNC2LI1Q8TCX1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
DYNC2LI1Q8TCX1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
DYNC2LI1Q8TCX1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
DYNC2LI1Q8TCX1 ST7-AS1-201ENST00000456775 1889 ntBASIC24.13■■□□□ 1.45
DYNC2LI1Q8TCX1 AC135731.1-201ENST00000569415 2548 ntBASIC24.12■■□□□ 1.45
DYNC2LI1Q8TCX1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DYNC2LI1Q8TCX1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
DYNC2LI1Q8TCX1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DYNC2LI1Q8TCX1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DYNC2LI1Q8TCX1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.09■■□□□ 1.45
DYNC2LI1Q8TCX1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DYNC2LI1Q8TCX1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DYNC2LI1Q8TCX1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DYNC2LI1Q8TCX1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
DYNC2LI1Q8TCX1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
DYNC2LI1Q8TCX1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
DYNC2LI1Q8TCX1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
DYNC2LI1Q8TCX1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DYNC2LI1Q8TCX1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
DYNC2LI1Q8TCX1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
DYNC2LI1Q8TCX1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
DYNC2LI1Q8TCX1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC24.03■■□□□ 1.44
DYNC2LI1Q8TCX1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.03■■□□□ 1.44
DYNC2LI1Q8TCX1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
DYNC2LI1Q8TCX1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
DYNC2LI1Q8TCX1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
DYNC2LI1Q8TCX1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
DYNC2LI1Q8TCX1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
DYNC2LI1Q8TCX1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
DYNC2LI1Q8TCX1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
DYNC2LI1Q8TCX1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
DYNC2LI1Q8TCX1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
DYNC2LI1Q8TCX1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
DYNC2LI1Q8TCX1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
DYNC2LI1Q8TCX1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DYNC2LI1Q8TCX1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24■■□□□ 1.43
DYNC2LI1Q8TCX1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DYNC2LI1Q8TCX1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DYNC2LI1Q8TCX1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DYNC2LI1Q8TCX1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DYNC2LI1Q8TCX1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DYNC2LI1Q8TCX1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DYNC2LI1Q8TCX1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DYNC2LI1Q8TCX1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DYNC2LI1Q8TCX1 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC23.96■■□□□ 1.43
DYNC2LI1Q8TCX1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DYNC2LI1Q8TCX1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
DYNC2LI1Q8TCX1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
DYNC2LI1Q8TCX1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DYNC2LI1Q8TCX1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DYNC2LI1Q8TCX1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.94■■□□□ 1.42
DYNC2LI1Q8TCX1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
DYNC2LI1Q8TCX1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DYNC2LI1Q8TCX1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.92■■□□□ 1.42
DYNC2LI1Q8TCX1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms