Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RETREG2Q8NC44 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
RETREG2Q8NC44 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RETREG2Q8NC44 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.82■■■□□ 2.52
RETREG2Q8NC44 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.82■■■□□ 2.52
RETREG2Q8NC44 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.82■■■□□ 2.52
RETREG2Q8NC44 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.8■■■□□ 2.52
RETREG2Q8NC44 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RETREG2Q8NC44 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
RETREG2Q8NC44 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
RETREG2Q8NC44 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.78■■■□□ 2.52
RETREG2Q8NC44 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.78■■■□□ 2.52
RETREG2Q8NC44 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.77■■■□□ 2.52
RETREG2Q8NC44 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.77■■■□□ 2.52
RETREG2Q8NC44 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.7■■■□□ 2.51
RETREG2Q8NC44 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
RETREG2Q8NC44 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
RETREG2Q8NC44 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
RETREG2Q8NC44 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
RETREG2Q8NC44 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
RETREG2Q8NC44 ABHD17AP4-201ENST00000411545 909 ntBASIC30.69■■■□□ 2.5
RETREG2Q8NC44 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
RETREG2Q8NC44 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.67■■■□□ 2.5
RETREG2Q8NC44 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
RETREG2Q8NC44 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
RETREG2Q8NC44 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RETREG2Q8NC44 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.66■■■□□ 2.5
RETREG2Q8NC44 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
RETREG2Q8NC44 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
RETREG2Q8NC44 MIR7108-201ENST00000614319 87 ntBASIC30.65■■■□□ 2.5
RETREG2Q8NC44 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
RETREG2Q8NC44 AC087741.3-201ENST00000624270 1347 ntBASIC30.65■■■□□ 2.5
RETREG2Q8NC44 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RETREG2Q8NC44 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.63■■■□□ 2.49
RETREG2Q8NC44 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
RETREG2Q8NC44 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RETREG2Q8NC44 DUX4L28-201ENST00000623687 678 ntBASIC30.62■■■□□ 2.49
RETREG2Q8NC44 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
RETREG2Q8NC44 MIR762-201ENST00000390236 83 ntBASIC30.61■■■□□ 2.49
RETREG2Q8NC44 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.61■■■□□ 2.49
RETREG2Q8NC44 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RETREG2Q8NC44 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RETREG2Q8NC44 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RETREG2Q8NC44 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
RETREG2Q8NC44 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RETREG2Q8NC44 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
RETREG2Q8NC44 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.58■■■□□ 2.49
RETREG2Q8NC44 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RETREG2Q8NC44 AC005559.1-201ENST00000589661 871 ntBASIC30.57■■■□□ 2.48
RETREG2Q8NC44 AC044849.2-201ENST00000606596 710 ntBASIC30.57■■■□□ 2.48
RETREG2Q8NC44 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.57■■■□□ 2.48
RETREG2Q8NC44 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RETREG2Q8NC44 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RETREG2Q8NC44 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
RETREG2Q8NC44 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.53■■■□□ 2.48
RETREG2Q8NC44 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RETREG2Q8NC44 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.53■■■□□ 2.48
RETREG2Q8NC44 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.52■■■□□ 2.48
RETREG2Q8NC44 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.52■■■□□ 2.48
RETREG2Q8NC44 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.51■■■□□ 2.47
RETREG2Q8NC44 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.51■■■□□ 2.47
RETREG2Q8NC44 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.5■■■□□ 2.47
RETREG2Q8NC44 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
RETREG2Q8NC44 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
RETREG2Q8NC44 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
RETREG2Q8NC44 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
RETREG2Q8NC44 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RETREG2Q8NC44 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.47■■■□□ 2.47
RETREG2Q8NC44 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
RETREG2Q8NC44 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.47
RETREG2Q8NC44 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.43■■■□□ 2.46
RETREG2Q8NC44 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
RETREG2Q8NC44 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
RETREG2Q8NC44 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
RETREG2Q8NC44 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
RETREG2Q8NC44 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RETREG2Q8NC44 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.39■■■□□ 2.46
RETREG2Q8NC44 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RETREG2Q8NC44 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.38■■■□□ 2.45
RETREG2Q8NC44 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.38■■■□□ 2.45
RETREG2Q8NC44 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
RETREG2Q8NC44 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.37■■■□□ 2.45
RETREG2Q8NC44 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
RETREG2Q8NC44 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.37■■■□□ 2.45
RETREG2Q8NC44 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
RETREG2Q8NC44 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
RETREG2Q8NC44 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
RETREG2Q8NC44 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RETREG2Q8NC44 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
RETREG2Q8NC44 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RETREG2Q8NC44 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RETREG2Q8NC44 HLA-V-202ENST00000446817 847 ntBASIC30.34■■■□□ 2.45
RETREG2Q8NC44 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.34■■■□□ 2.45
RETREG2Q8NC44 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.34■■■□□ 2.45
RETREG2Q8NC44 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RETREG2Q8NC44 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
RETREG2Q8NC44 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RETREG2Q8NC44 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.31■■■□□ 2.44
RETREG2Q8NC44 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.31■■■□□ 2.44
RETREG2Q8NC44 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.31■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms